RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 FAM212AQ96EL1 285 aa12.64□□□□□ -0.39
TRA2B-216ENST00000493864 ZCCHC6Q5VYS8 1495 aaKnown RBP12.64□□□□□ -0.39
TRA2B-216ENST00000493864 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
TRA2B-216ENST00000493864 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
TRA2B-216ENST00000493864 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
TRA2B-216ENST00000493864 RGL2O15211 777 aa12.53□□□□□ -0.4
TRA2B-216ENST00000493864 NACADO15069 1562 aa12.5□□□□□ -0.41
TRA2B-216ENST00000493864 DCAF1Q9Y4B6 1507 aa12.49□□□□□ -0.41
TRA2B-216ENST00000493864 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-216ENST00000493864 PYGBP11216 843 aa12.47□□□□□ -0.41
TRA2B-216ENST00000493864 UNC13AQ9UPW8 1703 aa12.45□□□□□ -0.42
TRA2B-216ENST00000493864 CHRM1P11229 460 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-216ENST00000493864 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
TRA2B-216ENST00000493864 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
TRA2B-216ENST00000493864 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-216ENST00000493864 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
TRA2B-216ENST00000493864 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
TRA2B-216ENST00000493864 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
TRA2B-216ENST00000493864 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
TRA2B-216ENST00000493864 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
TRA2B-216ENST00000493864 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
TRA2B-216ENST00000493864 HAX1O00165 279 aa12.3□□□□□ -0.44
TRA2B-216ENST00000493864 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
TRA2B-216ENST00000493864 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
TRA2B-216ENST00000493864 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
TRA2B-216ENST00000493864 PCDHB8Q9UN66 801 aa12.28□□□□□ -0.44
TRA2B-216ENST00000493864 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
TRA2B-216ENST00000493864 MAP3K13O43283 966 aa12.27□□□□□ -0.45
TRA2B-216ENST00000493864 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
TRA2B-216ENST00000493864 BICRAQ9NZM4 1560 aa12.25□□□□□ -0.45
TRA2B-216ENST00000493864 SHROOM4Q9ULL8 1493 aa12.24□□□□□ -0.45
TRA2B-216ENST00000493864 SCRIBQ14160 1630 aa12.23□□□□□ -0.45
TRA2B-216ENST00000493864 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-216ENST00000493864 STK25O00506 426 aa12.23□□□□□ -0.45
TRA2B-216ENST00000493864 POTEHQ6S545 545 aa12.23□□□□□ -0.45
TRA2B-216ENST00000493864 HS6ST3Q8IZP7 471 aa12.23□□□□□ -0.45
TRA2B-216ENST00000493864 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
TRA2B-216ENST00000493864 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-216ENST00000493864 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-216ENST00000493864 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
TRA2B-216ENST00000493864 SGIP1Q9BQI5 828 aa12.21□□□□□ -0.45
TRA2B-216ENST00000493864 EVX2Q03828 476 aa12.2□□□□□ -0.46
TRA2B-216ENST00000493864 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
TRA2B-216ENST00000493864 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
TRA2B-216ENST00000493864 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
TRA2B-216ENST00000493864 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
TRA2B-216ENST00000493864 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
TRA2B-216ENST00000493864 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
TRA2B-216ENST00000493864 PSEN1P49768 467 aa12.15□□□□□ -0.46
TRA2B-216ENST00000493864 MS4A3Q96HJ5 214 aa12.14□□□□□ -0.47
TRA2B-216ENST00000493864 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-216ENST00000493864 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
TRA2B-216ENST00000493864 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
TRA2B-216ENST00000493864 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-216ENST00000493864 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
TRA2B-216ENST00000493864 TRPC6Q9Y210 931 aa12.07□□□□□ -0.48
TRA2B-216ENST00000493864 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-216ENST00000493864 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-216ENST00000493864 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
TRA2B-216ENST00000493864 CLCN6P51797 869 aa12.02□□□□□ -0.49
TRA2B-216ENST00000493864 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
TRA2B-216ENST00000493864 GTPBP6O43824 516 aaPredicted RBP11.97□□□□□ -0.49
TRA2B-216ENST00000493864 TIE1P35590 1138 aa11.97□□□□□ -0.49
TRA2B-216ENST00000493864 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
TRA2B-216ENST00000493864 GABBR2O75899 941 aa11.96□□□□□ -0.49
TRA2B-216ENST00000493864 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
TRA2B-216ENST00000493864 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
TRA2B-216ENST00000493864 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
TRA2B-216ENST00000493864 RYDENQ9NUL5 291 aaKnown RBP11.93□□□□□ -0.5
TRA2B-216ENST00000493864 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
TRA2B-216ENST00000493864 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
TRA2B-216ENST00000493864 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
TRA2B-216ENST00000493864 SOX12O15370 315 aa11.89□□□□□ -0.51
TRA2B-216ENST00000493864 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
TRA2B-216ENST00000493864 TRIM35Q9UPQ4 493 aa11.89□□□□□ -0.51
TRA2B-216ENST00000493864 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
TRA2B-216ENST00000493864 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
TRA2B-216ENST00000493864 ATN1P54259 1190 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-216ENST00000493864 NLRP6P59044 892 aa11.86□□□□□ -0.51
TRA2B-216ENST00000493864 SP7Q8TDD2 431 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-216ENST00000493864 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-216ENST00000493864 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-216ENST00000493864 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
TRA2B-216ENST00000493864 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
TRA2B-216ENST00000493864 CECR2Q9BXF3 1484 aa11.81□□□□□ -0.52
TRA2B-216ENST00000493864 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
TRA2B-216ENST00000493864 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRA2B-216ENST00000493864 MS4A4AQ96JQ5 239 aa11.78□□□□□ -0.52
TRA2B-216ENST00000493864 PPP1R37O75864 691 aa11.77□□□□□ -0.53
TRA2B-216ENST00000493864 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
TRA2B-216ENST00000493864 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
TRA2B-216ENST00000493864 IER5LQ5T953 404 aa11.72□□□□□ -0.53
TRA2B-216ENST00000493864 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
TRA2B-216ENST00000493864 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
TRA2B-216ENST00000493864 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
TRA2B-216ENST00000493864 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
TRA2B-216ENST00000493864 MROH2BQ7Z745 1585 aa11.7□□□□□ -0.54
TRA2B-216ENST00000493864 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
TRA2B-216ENST00000493864 BAZ1AQ9NRL2 1556 aaPredicted RBP11.68□□□□□ -0.54
TRA2B-216ENST00000493864 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms