RNA–Protein interactions for RNA: ENST00000493442.1

FAM199X-202, Transcript of family with sequence similarity 199, X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM199X, Length 7,457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM199X-202ENST00000493442 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
FAM199X-202ENST00000493442 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
FAM199X-202ENST00000493442 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
FAM199X-202ENST00000493442 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
FAM199X-202ENST00000493442 ISY1Q9ULR0 285 aaKnown RBP12.87□□□□□ -0.35
FAM199X-202ENST00000493442 NPHP1O15259 732 aa12.87□□□□□ -0.35
FAM199X-202ENST00000493442 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
FAM199X-202ENST00000493442 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
FAM199X-202ENST00000493442 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
FAM199X-202ENST00000493442 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
FAM199X-202ENST00000493442 UPF2Q9HAU5 1272 aaKnown RBP12.83□□□□□ -0.36
FAM199X-202ENST00000493442 LMOD2Q6P5Q4 547 aa12.81□□□□□ -0.36
FAM199X-202ENST00000493442 TRIM44Q96DX7 344 aaPredicted RBP12.81□□□□□ -0.36
FAM199X-202ENST00000493442 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
FAM199X-202ENST00000493442 SOX12O15370 315 aa12.8□□□□□ -0.36
FAM199X-202ENST00000493442 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
FAM199X-202ENST00000493442 ESF1Q9H501 851 aaKnown RBP12.79□□□□□ -0.36
FAM199X-202ENST00000493442 HAP1P54257 671 aaPredicted RBP12.77□□□□□ -0.37
FAM199X-202ENST00000493442 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
FAM199X-202ENST00000493442 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
FAM199X-202ENST00000493442 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
FAM199X-202ENST00000493442 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.38
FAM199X-202ENST00000493442 CREBRFQ8IUR6 639 aa12.67□□□□□ -0.38
FAM199X-202ENST00000493442 ZRSR1Q15695 479 aaKnown RBP12.66□□□□□ -0.38
FAM199X-202ENST00000493442 APBB1O00213 710 aa12.65□□□□□ -0.38
FAM199X-202ENST00000493442 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
FAM199X-202ENST00000493442 TMC1Q8TDI8 760 aa12.65□□□□□ -0.38
FAM199X-202ENST00000493442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
FAM199X-202ENST00000493442 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
FAM199X-202ENST00000493442 KAT6BQ8WYB5 2073 aa12.62□□□□□ -0.39
FAM199X-202ENST00000493442 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
FAM199X-202ENST00000493442 RGS3P49796 1198 aa12.61□□□□□ -0.39
FAM199X-202ENST00000493442 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
FAM199X-202ENST00000493442 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
FAM199X-202ENST00000493442 DRC7Q8IY82 874 aa12.59□□□□□ -0.39
FAM199X-202ENST00000493442 FGD1P98174 961 aa12.58□□□□□ -0.4
FAM199X-202ENST00000493442 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
FAM199X-202ENST00000493442 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
FAM199X-202ENST00000493442 TAF7LQ5H9L4 462 aa12.56□□□□□ -0.4
FAM199X-202ENST00000493442 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
FAM199X-202ENST00000493442 NOC3LQ8WTT2 800 aaKnown RBP12.55□□□□□ -0.4
FAM199X-202ENST00000493442 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
FAM199X-202ENST00000493442 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
FAM199X-202ENST00000493442 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
FAM199X-202ENST00000493442 GOLGA2Q08379 1002 aa12.52□□□□□ -0.4
FAM199X-202ENST00000493442 MIER1Q8N108 512 aa12.52□□□□□ -0.41
FAM199X-202ENST00000493442 FOXD4L5Q5VV16 416 aaPredicted RBP12.51□□□□□ -0.41
FAM199X-202ENST00000493442 FOXD4L4Q8WXT5 416 aaPredicted RBP12.51□□□□□ -0.41
FAM199X-202ENST00000493442 KCNJ4P48050 445 aa12.51□□□□□ -0.41
FAM199X-202ENST00000493442 FOXD4L6Q3SYB3 417 aaPredicted RBP12.51□□□□□ -0.41
FAM199X-202ENST00000493442 FOXD4L3Q6VB84 417 aaPredicted RBP12.51□□□□□ -0.41
FAM199X-202ENST00000493442 OS9Q13438 667 aaPredicted RBP12.51□□□□□ -0.41
FAM199X-202ENST00000493442 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
FAM199X-202ENST00000493442 NOL8Q76FK4 1167 aaKnown RBP12.48□□□□□ -0.41
FAM199X-202ENST00000493442 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
FAM199X-202ENST00000493442 A0A0U1RQG5 324 aaPredicted RBP12.46□□□□□ -0.41
FAM199X-202ENST00000493442 SUPT16HQ9Y5B9 1047 aaKnown RBP12.46□□□□□ -0.41
FAM199X-202ENST00000493442 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
FAM199X-202ENST00000493442 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
FAM199X-202ENST00000493442 PTMSP20962 102 aa12.45□□□□□ -0.42
FAM199X-202ENST00000493442 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
FAM199X-202ENST00000493442 B4GALNT3Q6L9W6 998 aa12.44□□□□□ -0.42
FAM199X-202ENST00000493442 FTSJ3Q8IY81 847 aaKnown RBP12.43□□□□□ -0.42
FAM199X-202ENST00000493442 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
FAM199X-202ENST00000493442 VPS53Q5VIR6 699 aa12.4□□□□□ -0.42
FAM199X-202ENST00000493442 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
FAM199X-202ENST00000493442 CC2D1BQ5T0F9 858 aaKnown RBP12.39□□□□□ -0.43
FAM199X-202ENST00000493442 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
FAM199X-202ENST00000493442 TNNT3P45378 269 aaPredicted RBP12.38□□□□□ -0.43
FAM199X-202ENST00000493442 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
FAM199X-202ENST00000493442 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
FAM199X-202ENST00000493442 RAD21O60216 631 aa12.38□□□□□ -0.43
FAM199X-202ENST00000493442 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
FAM199X-202ENST00000493442 GNL2Q13823 731 aaKnown RBP12.37□□□□□ -0.43
FAM199X-202ENST00000493442 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
FAM199X-202ENST00000493442 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
FAM199X-202ENST00000493442 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
FAM199X-202ENST00000493442 PES1O00541 588 aaKnown RBP12.35□□□□□ -0.43
FAM199X-202ENST00000493442 MLECQ14165 292 aa12.35□□□□□ -0.43
FAM199X-202ENST00000493442 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
FAM199X-202ENST00000493442 BECN1Q14457 450 aa12.34□□□□□ -0.43
FAM199X-202ENST00000493442 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
FAM199X-202ENST00000493442 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
FAM199X-202ENST00000493442 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
FAM199X-202ENST00000493442 GOLGA6L4A6NEF3 574 aa12.33□□□□□ -0.44
FAM199X-202ENST00000493442 SKIDA1Q1XH10 827 aa12.32□□□□□ -0.44
FAM199X-202ENST00000493442 KDM4AO75164 1064 aa12.32□□□□□ -0.44
FAM199X-202ENST00000493442 CCAR2Q8N163 923 aaKnown RBP12.31□□□□□ -0.44
FAM199X-202ENST00000493442 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
FAM199X-202ENST00000493442 TONSLQ96HA7 1378 aa12.31□□□□□ -0.44
FAM199X-202ENST00000493442 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
FAM199X-202ENST00000493442 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
FAM199X-202ENST00000493442 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
FAM199X-202ENST00000493442 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
FAM199X-202ENST00000493442 RRP7BPQ9NSQ0 103 aa12.29□□□□□ -0.44
FAM199X-202ENST00000493442 WDR70Q9NW82 654 aa12.29□□□□□ -0.44
FAM199X-202ENST00000493442 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
FAM199X-202ENST00000493442 ANP32EQ9BTT0 268 aa12.28□□□□□ -0.44
FAM199X-202ENST00000493442 CASC1Q6TDU7 716 aa12.27□□□□□ -0.45
FAM199X-202ENST00000493442 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms