RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
TSC22D4-205ENST00000493217 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
TSC22D4-205ENST00000493217 ABCA5Q8WWZ7 1642 aa28.05■■■□□ 2.08
TSC22D4-205ENST00000493217 DHX57Q6P158 1386 aaKnown RBP28.04■■■□□ 2.08
TSC22D4-205ENST00000493217 CTTNBP2Q8WZ74 1663 aa28.03■■■□□ 2.08
TSC22D4-205ENST00000493217 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
TSC22D4-205ENST00000493217 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
TSC22D4-205ENST00000493217 P3H3Q8IVL6 736 aa28.02■■■□□ 2.08
TSC22D4-205ENST00000493217 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.08
TSC22D4-205ENST00000493217 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
TSC22D4-205ENST00000493217 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
TSC22D4-205ENST00000493217 CFAP43Q8NDM7 1665 aa27.98■■■□□ 2.07
TSC22D4-205ENST00000493217 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.063e-9■■□□□ 12.6
TSC22D4-205ENST00000493217 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.06
TSC22D4-205ENST00000493217 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
TSC22D4-205ENST00000493217 PHLDB1Q86UU1 1377 aa27.91■■■□□ 2.06
TSC22D4-205ENST00000493217 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
TSC22D4-205ENST00000493217 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
TSC22D4-205ENST00000493217 ITGAEP38570 1179 aa27.85■■■□□ 2.05
TSC22D4-205ENST00000493217 ATP1B4Q9UN42 357 aaPredicted RBP27.84■■■□□ 2.05
TSC22D4-205ENST00000493217 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
TSC22D4-205ENST00000493217 SNAPC4Q5SXM2 1469 aa27.81■■■□□ 2.04
TSC22D4-205ENST00000493217 RAB3GAP2Q9H2M9 1393 aa27.78■■■□□ 2.04
TSC22D4-205ENST00000493217 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
TSC22D4-205ENST00000493217 SETD5Q9C0A6 1442 aa27.72■■■□□ 2.03
TSC22D4-205ENST00000493217 SCAF1Q9H7N4 1312 aaKnown RBP27.71■■■□□ 2.03
TSC22D4-205ENST00000493217 FAM50AQ14320 339 aaKnown RBP27.71■■■□□ 2.03
TSC22D4-205ENST00000493217 PBRM1Q86U86 1689 aa27.7■■■□□ 2.03
TSC22D4-205ENST00000493217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.7■■■□□ 2.035e-8■□□□□ 8.8
TSC22D4-205ENST00000493217 GRIN2BQ13224 1484 aa27.66■■■□□ 2.02
TSC22D4-205ENST00000493217 ACIN1Q9UKV3 1341 aaKnown RBP27.66■■■□□ 2.02
TSC22D4-205ENST00000493217 MAPKBP1O60336 1514 aa27.63■■■□□ 2.01
TSC22D4-205ENST00000493217 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
TSC22D4-205ENST00000493217 LRRIQ1Q96JM4 1722 aa27.63■■■□□ 2.01
TSC22D4-205ENST00000493217 ADAMTS12P58397 1594 aa27.62■■■□□ 2.01
TSC22D4-205ENST00000493217 NEUROD1Q13562 356 aa27.61■■■□□ 2.01
TSC22D4-205ENST00000493217 MTUS2Q5JR59 1369 aa27.61■■■□□ 2.01
TSC22D4-205ENST00000493217 FGD6Q6ZV73 1430 aa27.59■■■□□ 2.01
TSC22D4-205ENST00000493217 CENPBP07199 599 aaPredicted RBP27.58■■■□□ 2.01
TSC22D4-205ENST00000493217 MIER1Q8N108 512 aa27.56■■■□□ 2
TSC22D4-205ENST00000493217 WDR62O43379 1518 aa27.56■■■□□ 2
TSC22D4-205ENST00000493217 IFT140Q96RY7 1462 aa27.56■■■□□ 2
TSC22D4-205ENST00000493217 IQGAP2Q13576 1575 aa27.55■■■□□ 2
TSC22D4-205ENST00000493217 ZNF608Q9ULD9 1512 aaPredicted RBP27.5■■□□□ 1.99
TSC22D4-205ENST00000493217 NCOA2Q15596 1464 aa27.5■■□□□ 1.99
TSC22D4-205ENST00000493217 EHBP1L1Q8N3D4 1523 aa27.49■■□□□ 1.99
TSC22D4-205ENST00000493217 CCDC18Q5T9S5 1454 aa27.47■■□□□ 1.99
TSC22D4-205ENST00000493217 MYOM3Q5VTT5 1437 aa27.47■■□□□ 1.99
TSC22D4-205ENST00000493217 SUPT6HQ7KZ85 1726 aaKnown RBP27.46■■□□□ 1.99
TSC22D4-205ENST00000493217 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
TSC22D4-205ENST00000493217 MAGI3Q5TCQ9 1506 aa27.42■■□□□ 1.98
TSC22D4-205ENST00000493217 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
TSC22D4-205ENST00000493217 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
TSC22D4-205ENST00000493217 PTPRKQ15262 1439 aa27.41■■□□□ 1.98
TSC22D4-205ENST00000493217 HFM1A2PYH4 1435 aa27.37■■□□□ 1.97
TSC22D4-205ENST00000493217 EPRSP07814 1512 aaKnown RBP27.37■■□□□ 1.97
TSC22D4-205ENST00000493217 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
TSC22D4-205ENST00000493217 SIN3AQ96ST3 1273 aa27.35■■□□□ 1.97
TSC22D4-205ENST00000493217 TIMELESSQ9UNS1 1208 aa27.34■■□□□ 1.97
TSC22D4-205ENST00000493217 EIF4G3O43432 1585 aaKnown RBP27.33■■□□□ 1.97
TSC22D4-205ENST00000493217 PTPN23Q9H3S7 1636 aa27.32■■□□□ 1.96
TSC22D4-205ENST00000493217 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
TSC22D4-205ENST00000493217 GRIN2AQ12879 1464 aa27.3■■□□□ 1.96
TSC22D4-205ENST00000493217 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
TSC22D4-205ENST00000493217 DISP1Q96F81 1524 aa27.28■■□□□ 1.96
TSC22D4-205ENST00000493217 NAIPQ13075 1403 aa27.28■■□□□ 1.96
TSC22D4-205ENST00000493217 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
TSC22D4-205ENST00000493217 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
TSC22D4-205ENST00000493217 GTF3C3Q9Y5Q9 886 aa27.27■■□□□ 1.96
TSC22D4-205ENST00000493217 KIAA0556O60303 1618 aa27.26■■□□□ 1.95
TSC22D4-205ENST00000493217 UACAQ9BZF9 1416 aa27.26■■□□□ 1.95
TSC22D4-205ENST00000493217 MAGI1Q96QZ7 1491 aaPredicted RBP27.22■■□□□ 1.95
TSC22D4-205ENST00000493217 MIA2Q96PC5 1412 aa27.2■■□□□ 1.95
TSC22D4-205ENST00000493217 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
TSC22D4-205ENST00000493217 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
TSC22D4-205ENST00000493217 NUP153P49790 1475 aaKnown RBP27.14■■□□□ 1.94
TSC22D4-205ENST00000493217 ARID3CA6NKF2 412 aa27.13■■□□□ 1.93
TSC22D4-205ENST00000493217 AKNAQ7Z591 1439 aa27.12■■□□□ 1.93
TSC22D4-205ENST00000493217 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
TSC22D4-205ENST00000493217 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
TSC22D4-205ENST00000493217 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
TSC22D4-205ENST00000493217 GCC2Q8IWJ2 1684 aa27.09■■□□□ 1.93
TSC22D4-205ENST00000493217 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
TSC22D4-205ENST00000493217 CHIC2Q9UKJ5 165 aa27.07■■□□□ 1.92
TSC22D4-205ENST00000493217 TONSLQ96HA7 1378 aa27.05■■□□□ 1.92
TSC22D4-205ENST00000493217 NUP160Q12769 1436 aa27.03■■□□□ 1.92
TSC22D4-205ENST00000493217 CDK11AQ9UQ88 783 aaPredicted RBP27.02■■□□□ 1.92
TSC22D4-205ENST00000493217 FBLN2P98095 1184 aa26.99■■□□□ 1.91
TSC22D4-205ENST00000493217 KDM6BO15054 1643 aa26.97■■□□□ 1.91
TSC22D4-205ENST00000493217 DENND4BO75064 1496 aaPredicted RBP26.97■■□□□ 1.91
TSC22D4-205ENST00000493217 JPH4Q96JJ6 628 aa26.96■■□□□ 1.91
TSC22D4-205ENST00000493217 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
TSC22D4-205ENST00000493217 DAPK1P53355 1430 aa26.96■■□□□ 1.91
TSC22D4-205ENST00000493217 CARMIL2Q6F5E8 1435 aa26.95■■□□□ 1.9
TSC22D4-205ENST00000493217 ROCK1Q13464 1354 aa26.94■■□□□ 1.9
TSC22D4-205ENST00000493217 TROQ12816 1431 aaPredicted RBP26.94■■□□□ 1.9
TSC22D4-205ENST00000493217 DNMT1P26358 1616 aaKnown RBP26.93■■□□□ 1.9
TSC22D4-205ENST00000493217 ABCC5O15440 1437 aa26.92■■□□□ 1.9
TSC22D4-205ENST00000493217 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
TSC22D4-205ENST00000493217 KDM5BQ9UGL1 1544 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms