RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 ARAP1Q96P48 1450 aa8.49□□□□□ -1.05
NEK4-205ENST00000493199 PBRM1Q86U86 1689 aa8.48□□□□□ -1.05
NEK4-205ENST00000493199 SNAPC4Q5SXM2 1469 aa8.47□□□□□ -1.05
NEK4-205ENST00000493199 KIF21BO75037 1637 aa8.47□□□□□ -1.05
NEK4-205ENST00000493199 TRHP20396 242 aaPredicted RBP8.46□□□□□ -1.06
NEK4-205ENST00000493199 PRXQ9BXM0 1461 aa8.45□□□□□ -1.06
NEK4-205ENST00000493199 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
NEK4-205ENST00000493199 EHMT2Q96KQ7 1210 aa8.43□□□□□ -1.06
NEK4-205ENST00000493199 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
NEK4-205ENST00000493199 CLASP1Q7Z460 1538 aa8.43□□□□□ -1.06
NEK4-205ENST00000493199 GRIN2AQ12879 1464 aa8.42□□□□□ -1.06
NEK4-205ENST00000493199 ADAMTS12P58397 1594 aa8.42□□□□□ -1.06
NEK4-205ENST00000493199 CARMIL2Q6F5E8 1435 aa8.41□□□□□ -1.06
NEK4-205ENST00000493199 KIAA0586Q9BVV6 1533 aa8.4□□□□□ -1.06
NEK4-205ENST00000493199 APLP2Q06481 763 aa8.4□□□□□ -1.06
NEK4-205ENST00000493199 LOC105371045A0A1W2PR82 267 aa8.39□□□□□ -1.07
NEK4-205ENST00000493199 JPH4Q96JJ6 628 aa8.38□□□□□ -1.07
NEK4-205ENST00000493199 RANGAP1P46060 587 aaPredicted RBP8.36□□□□□ -1.07
NEK4-205ENST00000493199 CTTNBP2Q8WZ74 1663 aa8.35□□□□□ -1.07
NEK4-205ENST00000493199 CLIP1P30622 1438 aa8.35□□□□□ -1.07
NEK4-205ENST00000493199 NUP160Q12769 1436 aa8.35□□□□□ -1.07
NEK4-205ENST00000493199 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
NEK4-205ENST00000493199 EFCAB5A4FU69 1503 aa8.34□□□□□ -1.08
NEK4-205ENST00000493199 FMN1Q68DA7 1419 aa8.32□□□□□ -1.08
NEK4-205ENST00000493199 NPM1P06748 294 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEK4-205ENST00000493199 CEP162Q5TB80 1403 aa8.31□□□□□ -1.08
NEK4-205ENST00000493199 CDK11AQ9UQ88 783 aaPredicted RBP8.31□□□□□ -1.08
NEK4-205ENST00000493199 ATP1B4Q9UN42 357 aaPredicted RBP8.3□□□□□ -1.08
NEK4-205ENST00000493199 UGGT2Q9NYU1 1516 aa8.29□□□□□ -1.08
NEK4-205ENST00000493199 CEP170Q5SW79 1584 aa8.29□□□□□ -1.08
NEK4-205ENST00000493199 PRG4Q92954 1404 aaPredicted RBP8.29□□□□□ -1.08
NEK4-205ENST00000493199 P3H3Q8IVL6 736 aa8.28□□□□□ -1.08
NEK4-205ENST00000493199 PTPRGP23470 1445 aa8.28□□□□□ -1.08
NEK4-205ENST00000493199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.27□□□□□ -1.09
NEK4-205ENST00000493199 HNRNPUL2Q1KMD3 747 aaKnown RBP8.27□□□□□ -1.09
NEK4-205ENST00000493199 ERCC6L2Q5T890 1561 aa8.26□□□□□ -1.09
NEK4-205ENST00000493199 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
NEK4-205ENST00000493199 SHROOM2Q13796 1616 aa8.25□□□□□ -1.09
NEK4-205ENST00000493199 VPS8Q8N3P4 1428 aa8.23□□□□□ -1.09
NEK4-205ENST00000493199 ARHGAP35Q9NRY4 1499 aa8.23□□□□□ -1.09
NEK4-205ENST00000493199 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
NEK4-205ENST00000493199 KIAA0556O60303 1618 aa8.22□□□□□ -1.09
NEK4-205ENST00000493199 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
NEK4-205ENST00000493199 KIF13AQ9H1H9 1805 aa8.21□□□□□ -1.1
NEK4-205ENST00000493199 FHOD3Q2V2M9 1422 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 CCDC18Q5T9S5 1454 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 DISP1Q96F81 1524 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 POTEDQ86YR6 584 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 CASKIN1Q8WXD9 1431 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 UACAQ9BZF9 1416 aa8.2□□□□□ -1.1
NEK4-205ENST00000493199 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
NEK4-205ENST00000493199 HECW1Q76N89 1606 aa8.18□□□□□ -1.1
NEK4-205ENST00000493199 MTUS2Q5JR59 1369 aa8.17□□□□□ -1.1
NEK4-205ENST00000493199 MAP3K1Q13233 1512 aa8.16□□□□□ -1.1
NEK4-205ENST00000493199 ABCC10Q5T3U5 1492 aa8.16□□□□□ -1.1
NEK4-205ENST00000493199 RAPGEF6Q8TEU7 1601 aa8.15□□□□□ -1.1
NEK4-205ENST00000493199 MAPKBP1O60336 1514 aa8.15□□□□□ -1.1
NEK4-205ENST00000493199 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
NEK4-205ENST00000493199 ABCC2Q92887 1545 aa8.13□□□□□ -1.11
NEK4-205ENST00000493199 MSH5O43196 834 aa8.13□□□□□ -1.11
NEK4-205ENST00000493199 FAM69CQ0P6D2 419 aa8.13□□□□□ -1.11
NEK4-205ENST00000493199 DIP2BQ9P265 1576 aa8.12□□□□□ -1.11
NEK4-205ENST00000493199 EPRSP07814 1512 aaKnown RBP8.12□□□□□ -1.11
NEK4-205ENST00000493199 PLB1Q6P1J6 1458 aa8.12□□□□□ -1.11
NEK4-205ENST00000493199 ABCA8O94911 1581 aa8.11□□□□□ -1.11
NEK4-205ENST00000493199 ADCY10Q96PN6 1610 aa8.11□□□□□ -1.11
NEK4-205ENST00000493199 ARID3CA6NKF2 412 aa8.09□□□□□ -1.11
NEK4-205ENST00000493199 PCF11O94913 1555 aaKnown RBP8.09□□□□□ -1.11
NEK4-205ENST00000493199 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
NEK4-205ENST00000493199 NUP153P49790 1475 aaKnown RBP8.08□□□□□ -1.12
NEK4-205ENST00000493199 KDM6BO15054 1643 aa8.08□□□□□ -1.12
NEK4-205ENST00000493199 KCNH8Q96L42 1107 aa8.08□□□□□ -1.12
NEK4-205ENST00000493199 TIAM1Q13009 1591 aa8.08□□□□□ -1.12
NEK4-205ENST00000493199 EHBP1L1Q8N3D4 1523 aa8.08□□□□□ -1.12
NEK4-205ENST00000493199 ATP10BO94823 1461 aa8.07□□□□□ -1.12
NEK4-205ENST00000493199 TROQ12816 1431 aaPredicted RBP8.07□□□□□ -1.12
NEK4-205ENST00000493199 KDM4FA0A1W2PPD8 638 aa8.07□□□□□ -1.12
NEK4-205ENST00000493199 CCNB3Q8WWL7 1395 aa8.07□□□□□ -1.12
NEK4-205ENST00000493199 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
NEK4-205ENST00000493199 RSPH4AQ5TD94 716 aa8.06□□□□□ -1.12
NEK4-205ENST00000493199 SUPT6HQ7KZ85 1726 aaKnown RBP8.06□□□□□ -1.12
NEK4-205ENST00000493199 ACIN1Q9UKV3 1341 aaKnown RBP8.05□□□□□ -1.12
NEK4-205ENST00000493199 TSPOAP1O95153 1857 aa8.05□□□□□ -1.12
NEK4-205ENST00000493199 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
NEK4-205ENST00000493199 EFCAB2Q5VUJ9 269 aa8.05□□□□□ -1.12
NEK4-205ENST00000493199 CFDP1Q9UEE9 299 aaPredicted RBP8.05□□□□□ -1.12
NEK4-205ENST00000493199 KIF14Q15058 1648 aa8.04□□□□□ -1.12
NEK4-205ENST00000493199 WDR7Q9Y4E6 1490 aa8.04□□□□□ -1.12
NEK4-205ENST00000493199 CFAP43Q8NDM7 1665 aa8.04□□□□□ -1.12
NEK4-205ENST00000493199 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
NEK4-205ENST00000493199 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
NEK4-205ENST00000493199 GLI2P10070 1586 aa8.02□□□□□ -1.13
NEK4-205ENST00000493199 PHLDB1Q86UU1 1377 aa8.02□□□□□ -1.13
NEK4-205ENST00000493199 TSPY4P0CV99 314 aa8.02□□□□□ -1.13
NEK4-205ENST00000493199 TSPY10P0CW01 314 aa8.02□□□□□ -1.13
NEK4-205ENST00000493199 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
NEK4-205ENST00000493199 CDK13Q14004 1512 aaKnown RBP8.02□□□□□ -1.13
NEK4-205ENST00000493199 MIA2Q96PC5 1412 aa8.02□□□□□ -1.13
NEK4-205ENST00000493199 PLEKHH2Q8IVE3 1493 aa8□□□□□ -1.13
NEK4-205ENST00000493199 PPRC1Q5VV67 1664 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms