RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
SEC22A-210ENST00000492595 FGD5Q6ZNL6 1462 aa16.86■□□□□ 0.29
SEC22A-210ENST00000492595 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
SEC22A-210ENST00000492595 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
SEC22A-210ENST00000492595 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
SEC22A-210ENST00000492595 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
SEC22A-210ENST00000492595 CUX1P39880 1505 aa16.72■□□□□ 0.27
SEC22A-210ENST00000492595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■□□□ 11.9
SEC22A-210ENST00000492595 ERCC6L2Q5T890 1561 aa16.7■□□□□ 0.26
SEC22A-210ENST00000492595 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
SEC22A-210ENST00000492595 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
SEC22A-210ENST00000492595 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
SEC22A-210ENST00000492595 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
SEC22A-210ENST00000492595 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
SEC22A-210ENST00000492595 PBRM1Q86U86 1689 aa16.66■□□□□ 0.26
SEC22A-210ENST00000492595 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
SEC22A-210ENST00000492595 NUP160Q12769 1436 aa16.65■□□□□ 0.26
SEC22A-210ENST00000492595 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
SEC22A-210ENST00000492595 ABCA5Q8WWZ7 1642 aa16.6■□□□□ 0.25
SEC22A-210ENST00000492595 KIF13AQ9H1H9 1805 aa16.59■□□□□ 0.25
SEC22A-210ENST00000492595 PRG4Q92954 1404 aaPredicted RBP16.58■□□□□ 0.24
SEC22A-210ENST00000492595 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
SEC22A-210ENST00000492595 SHROOM2Q13796 1616 aa16.56■□□□□ 0.24
SEC22A-210ENST00000492595 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
SEC22A-210ENST00000492595 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
SEC22A-210ENST00000492595 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
SEC22A-210ENST00000492595 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
SEC22A-210ENST00000492595 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
SEC22A-210ENST00000492595 MAPKBP1O60336 1514 aa16.51■□□□□ 0.23
SEC22A-210ENST00000492595 KDM6BO15054 1643 aa16.51■□□□□ 0.23
SEC22A-210ENST00000492595 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
SEC22A-210ENST00000492595 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
SEC22A-210ENST00000492595 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
SEC22A-210ENST00000492595 ZBTB22O15209 634 aa16.4■□□□□ 0.22
SEC22A-210ENST00000492595 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
SEC22A-210ENST00000492595 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
SEC22A-210ENST00000492595 CACNB1Q02641 598 aaPredicted RBP16.34■□□□□ 0.21
SEC22A-210ENST00000492595 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
SEC22A-210ENST00000492595 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
SEC22A-210ENST00000492595 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
SEC22A-210ENST00000492595 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
SEC22A-210ENST00000492595 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
SEC22A-210ENST00000492595 PTPRGP23470 1445 aa16.28■□□□□ 0.2
SEC22A-210ENST00000492595 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
SEC22A-210ENST00000492595 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
SEC22A-210ENST00000492595 PLB1Q6P1J6 1458 aa16.26■□□□□ 0.19
SEC22A-210ENST00000492595 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
SEC22A-210ENST00000492595 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
SEC22A-210ENST00000492595 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
SEC22A-210ENST00000492595 GLI2P10070 1586 aa16.21■□□□□ 0.19
SEC22A-210ENST00000492595 ABCC2Q92887 1545 aa16.21■□□□□ 0.19
SEC22A-210ENST00000492595 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
SEC22A-210ENST00000492595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
SEC22A-210ENST00000492595 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
SEC22A-210ENST00000492595 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
SEC22A-210ENST00000492595 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
SEC22A-210ENST00000492595 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
SEC22A-210ENST00000492595 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.17
SEC22A-210ENST00000492595 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
SEC22A-210ENST00000492595 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
SEC22A-210ENST00000492595 IGF1RP08069 1367 aa16.13■□□□□ 0.17
SEC22A-210ENST00000492595 UHRF1BP1LA0JNW5 1464 aa16.12■□□□□ 0.17
SEC22A-210ENST00000492595 SUPT5HO00267 1087 aaKnown RBP16.11■□□□□ 0.17
SEC22A-210ENST00000492595 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
SEC22A-210ENST00000492595 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
SEC22A-210ENST00000492595 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
SEC22A-210ENST00000492595 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
SEC22A-210ENST00000492595 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
SEC22A-210ENST00000492595 MAP3K4Q9Y6R4 1608 aa16.05■□□□□ 0.16
SEC22A-210ENST00000492595 APLP2Q06481 763 aa16.04■□□□□ 0.16
SEC22A-210ENST00000492595 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
SEC22A-210ENST00000492595 CUL7Q14999 1698 aa16.03■□□□□ 0.16
SEC22A-210ENST00000492595 CARMIL1Q5VZK9 1371 aa16.02■□□□□ 0.16
SEC22A-210ENST00000492595 LMTK3Q96Q04 1460 aa16■□□□□ 0.15
SEC22A-210ENST00000492595 CD109Q6YHK3 1445 aa15.97■□□□□ 0.15
SEC22A-210ENST00000492595 WDR7Q9Y4E6 1490 aa15.97■□□□□ 0.15
SEC22A-210ENST00000492595 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
SEC22A-210ENST00000492595 MAGI3Q5TCQ9 1506 aa15.95■□□□□ 0.14
SEC22A-210ENST00000492595 CAPN15O75808 1086 aa15.95■□□□□ 0.14
SEC22A-210ENST00000492595 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
SEC22A-210ENST00000492595 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
SEC22A-210ENST00000492595 ZCCHC11Q5TAX3 1644 aaKnown RBP15.92■□□□□ 0.14
SEC22A-210ENST00000492595 PTPRMP28827 1452 aa15.91■□□□□ 0.14
SEC22A-210ENST00000492595 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
SEC22A-210ENST00000492595 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
SEC22A-210ENST00000492595 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
SEC22A-210ENST00000492595 SOCS7O14512 581 aa15.87■□□□□ 0.13
SEC22A-210ENST00000492595 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
SEC22A-210ENST00000492595 DSG3P32926 999 aa15.85■□□□□ 0.13
SEC22A-210ENST00000492595 KIF21BO75037 1637 aa15.85■□□□□ 0.13
SEC22A-210ENST00000492595 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
SEC22A-210ENST00000492595 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
SEC22A-210ENST00000492595 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.13
SEC22A-210ENST00000492595 ARID4BQ4LE39 1312 aaPredicted RBP15.83■□□□□ 0.12
SEC22A-210ENST00000492595 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
SEC22A-210ENST00000492595 CERKQ8TCT0 537 aa15.82■□□□□ 0.12
SEC22A-210ENST00000492595 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
SEC22A-210ENST00000492595 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
SEC22A-210ENST00000492595 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
SEC22A-210ENST00000492595 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms