RNA–Protein interactions for RNA: ENST00000492034.1

POLR1A-209, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-209ENST00000492034 FBLN2P98095 1184 aa21.97■■□□□ 1.11
POLR1A-209ENST00000492034 CTTNBP2Q8WZ74 1663 aa21.97■■□□□ 1.11
POLR1A-209ENST00000492034 KIAA0586Q9BVV6 1533 aa21.91■■□□□ 1.1
POLR1A-209ENST00000492034 EFCAB5A4FU69 1503 aa21.89■■□□□ 1.09
POLR1A-209ENST00000492034 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
POLR1A-209ENST00000492034 VPS8Q8N3P4 1428 aa21.87■■□□□ 1.09
POLR1A-209ENST00000492034 IQGAP2Q13576 1575 aa21.87■■□□□ 1.09
POLR1A-209ENST00000492034 NUP160Q12769 1436 aa21.86■■□□□ 1.09
POLR1A-209ENST00000492034 ARAP1Q96P48 1450 aa21.83■■□□□ 1.08
POLR1A-209ENST00000492034 CEP170Q5SW79 1584 aa21.79■■□□□ 1.08
POLR1A-209ENST00000492034 APLP2Q06481 763 aa21.79■■□□□ 1.08
POLR1A-209ENST00000492034 UGGT2Q9NYU1 1516 aa21.79■■□□□ 1.08
POLR1A-209ENST00000492034 SAMD9Q5K651 1589 aa21.75■■□□□ 1.07
POLR1A-209ENST00000492034 P3H3Q8IVL6 736 aa21.75■■□□□ 1.07
POLR1A-209ENST00000492034 CHD1O14646 1710 aa21.75■■□□□ 1.07
POLR1A-209ENST00000492034 JPH4Q96JJ6 628 aa21.74■■□□□ 1.07
POLR1A-209ENST00000492034 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
POLR1A-209ENST00000492034 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
POLR1A-209ENST00000492034 CARMIL2Q6F5E8 1435 aa21.71■■□□□ 1.07
POLR1A-209ENST00000492034 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
POLR1A-209ENST00000492034 CASKIN1Q8WXD9 1431 aa21.62■■□□□ 1.05
POLR1A-209ENST00000492034 KIAA0556O60303 1618 aa21.62■■□□□ 1.05
POLR1A-209ENST00000492034 FYCO1Q9BQS8 1478 aa21.59■■□□□ 1.05
POLR1A-209ENST00000492034 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
POLR1A-209ENST00000492034 MAP3K1Q13233 1512 aa21.58■■□□□ 1.04
POLR1A-209ENST00000492034 ATP1B4Q9UN42 357 aaPredicted RBP21.57■■□□□ 1.04
POLR1A-209ENST00000492034 PRG4Q92954 1404 aaPredicted RBP21.56■■□□□ 1.04
POLR1A-209ENST00000492034 TRIM26Q12899 539 aaPredicted RBP21.56■■□□□ 1.04
POLR1A-209ENST00000492034 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
POLR1A-209ENST00000492034 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
POLR1A-209ENST00000492034 PCF11O94913 1555 aaKnown RBP21.53■■□□□ 1.04
POLR1A-209ENST00000492034 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
POLR1A-209ENST00000492034 PTPRGP23470 1445 aa21.46■■□□□ 1.03
POLR1A-209ENST00000492034 TIAM1Q13009 1591 aa21.46■■□□□ 1.03
POLR1A-209ENST00000492034 HECW1Q76N89 1606 aa21.46■■□□□ 1.03
POLR1A-209ENST00000492034 CCDC18Q5T9S5 1454 aa21.45■■□□□ 1.03
POLR1A-209ENST00000492034 TTBK1Q5TCY1 1321 aaPredicted RBP21.45■■□□□ 1.02
POLR1A-209ENST00000492034 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
POLR1A-209ENST00000492034 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
POLR1A-209ENST00000492034 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
POLR1A-209ENST00000492034 LRRC9Q6ZRR7 1453 aa21.39■■□□□ 1.02
POLR1A-209ENST00000492034 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
POLR1A-209ENST00000492034 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
POLR1A-209ENST00000492034 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
POLR1A-209ENST00000492034 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
POLR1A-209ENST00000492034 MTUS2Q5JR59 1369 aa21.35■■□□□ 1.01
POLR1A-209ENST00000492034 ABCA8O94911 1581 aa21.34■■□□□ 1.01
POLR1A-209ENST00000492034 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1.01
POLR1A-209ENST00000492034 UACAQ9BZF9 1416 aa21.32■■□□□ 1
POLR1A-209ENST00000492034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
POLR1A-209ENST00000492034 HNRNPUL2Q1KMD3 747 aaKnown RBP21.31■■□□□ 1
POLR1A-209ENST00000492034 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
POLR1A-209ENST00000492034 EHBP1L1Q8N3D4 1523 aa21.27■■□□□ 1
POLR1A-209ENST00000492034 LRRIQ1Q96JM4 1722 aa21.26■□□□□ 0.99
POLR1A-209ENST00000492034 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
POLR1A-209ENST00000492034 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
POLR1A-209ENST00000492034 UHRF1BP1LA0JNW5 1464 aa21.24■□□□□ 0.99
POLR1A-209ENST00000492034 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
POLR1A-209ENST00000492034 ABCC2Q92887 1545 aa21.22■□□□□ 0.99
POLR1A-209ENST00000492034 ATP10BO94823 1461 aa21.21■□□□□ 0.99
POLR1A-209ENST00000492034 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
POLR1A-209ENST00000492034 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
POLR1A-209ENST00000492034 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
POLR1A-209ENST00000492034 MAGI3Q5TCQ9 1506 aa21.15■□□□□ 0.98
POLR1A-209ENST00000492034 NCOA2Q15596 1464 aa21.15■□□□□ 0.98
POLR1A-209ENST00000492034 CCNB3Q8WWL7 1395 aa21.15■□□□□ 0.98
POLR1A-209ENST00000492034 PHLDB1Q86UU1 1377 aa21.14■□□□□ 0.98
POLR1A-209ENST00000492034 KDM5BQ9UGL1 1544 aa21.11■□□□□ 0.97
POLR1A-209ENST00000492034 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
POLR1A-209ENST00000492034 AEBP2Q6ZN18 517 aaPredicted RBP21.1■□□□□ 0.97
POLR1A-209ENST00000492034 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
POLR1A-209ENST00000492034 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
POLR1A-209ENST00000492034 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
POLR1A-209ENST00000492034 FGD6Q6ZV73 1430 aa21.05■□□□□ 0.96
POLR1A-209ENST00000492034 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
POLR1A-209ENST00000492034 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
POLR1A-209ENST00000492034 FAM50AQ14320 339 aaKnown RBP21.04■□□□□ 0.96
POLR1A-209ENST00000492034 KIF14Q15058 1648 aa21.03■□□□□ 0.96
POLR1A-209ENST00000492034 ZCCHC11Q5TAX3 1644 aaKnown RBP21.02■□□□□ 0.96
POLR1A-209ENST00000492034 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
POLR1A-209ENST00000492034 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
POLR1A-209ENST00000492034 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
POLR1A-209ENST00000492034 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
POLR1A-209ENST00000492034 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
POLR1A-209ENST00000492034 TCOF1Q13428 1488 aaKnown RBP20.94■□□□□ 0.94
POLR1A-209ENST00000492034 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
POLR1A-209ENST00000492034 ITSN2Q9NZM3 1697 aa20.94■□□□□ 0.94
POLR1A-209ENST00000492034 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
POLR1A-209ENST00000492034 KCNH8Q96L42 1107 aa20.93■□□□□ 0.94
POLR1A-209ENST00000492034 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
POLR1A-209ENST00000492034 WDR7Q9Y4E6 1490 aa20.92■□□□□ 0.94
POLR1A-209ENST00000492034 ITGAEP38570 1179 aa20.91■□□□□ 0.94
POLR1A-209ENST00000492034 ASXL2Q76L83 1435 aa20.89■□□□□ 0.94
POLR1A-209ENST00000492034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.86■□□□□ 0.93
POLR1A-209ENST00000492034 ZNF777Q9ULD5 760 aaPredicted RBP20.83■□□□□ 0.93
POLR1A-209ENST00000492034 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
POLR1A-209ENST00000492034 PLCH2O75038 1416 aa20.81■□□□□ 0.92
POLR1A-209ENST00000492034 RSPH4AQ5TD94 716 aa20.81■□□□□ 0.92
POLR1A-209ENST00000492034 EFCAB2Q5VUJ9 269 aa20.8■□□□□ 0.92
POLR1A-209ENST00000492034 CAMSAP2Q08AD1 1489 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms