RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 MIER1Q8N108 512 aa10.93□□□□□ -0.66
RTN4-215ENST00000491592 PLCD3Q8N3E9 789 aa10.93□□□□□ -0.66
RTN4-215ENST00000491592 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
RTN4-215ENST00000491592 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
RTN4-215ENST00000491592 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
RTN4-215ENST00000491592 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
RTN4-215ENST00000491592 KLHL34Q8N239 644 aa10.86□□□□□ -0.67
RTN4-215ENST00000491592 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
RTN4-215ENST00000491592 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
RTN4-215ENST00000491592 SLC39A7Q92504 469 aa10.84□□□□□ -0.67
RTN4-215ENST00000491592 C7P10643 843 aa10.83□□□□□ -0.68
RTN4-215ENST00000491592 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
RTN4-215ENST00000491592 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
RTN4-215ENST00000491592 KIF12Q96FN5 646 aa10.82□□□□□ -0.68
RTN4-215ENST00000491592 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
RTN4-215ENST00000491592 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
RTN4-215ENST00000491592 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
RTN4-215ENST00000491592 RASEFQ8IZ41 740 aa10.78□□□□□ -0.68
RTN4-215ENST00000491592 MAP3K13O43283 966 aa10.75□□□□□ -0.69
RTN4-215ENST00000491592 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
RTN4-215ENST00000491592 TIE1P35590 1138 aa10.73□□□□□ -0.69
RTN4-215ENST00000491592 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
RTN4-215ENST00000491592 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
RTN4-215ENST00000491592 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
RTN4-215ENST00000491592 NUBP1P53384 320 aa10.68□□□□□ -0.7
RTN4-215ENST00000491592 PKD2Q13563 968 aa10.68□□□□□ -0.7
RTN4-215ENST00000491592 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
RTN4-215ENST00000491592 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
RTN4-215ENST00000491592 PCDHB13Q9Y5F0 798 aa10.65□□□□□ -0.7
RTN4-215ENST00000491592 SCUBE2Q9NQ36 999 aa10.64□□□□□ -0.71
RTN4-215ENST00000491592 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
RTN4-215ENST00000491592 POTEJP0CG39 1038 aa10.63□□□□□ -0.71
RTN4-215ENST00000491592 CIZ1Q9ULV3 898 aaPredicted RBP10.61□□□□□ -0.71
RTN4-215ENST00000491592 SEC24BO95487 1268 aa10.6□□□□□ -0.71
RTN4-215ENST00000491592 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
RTN4-215ENST00000491592 IER5LQ5T953 404 aa10.59□□□□□ -0.71
RTN4-215ENST00000491592 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
RTN4-215ENST00000491592 POTEMA6NI47 508 aa10.58□□□□□ -0.72
RTN4-215ENST00000491592 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
RTN4-215ENST00000491592 GSE1Q14687 1217 aa10.56□□□□□ -0.72
RTN4-215ENST00000491592 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
RTN4-215ENST00000491592 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
RTN4-215ENST00000491592 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
RTN4-215ENST00000491592 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
RTN4-215ENST00000491592 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
RTN4-215ENST00000491592 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
RTN4-215ENST00000491592 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
RTN4-215ENST00000491592 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
RTN4-215ENST00000491592 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
RTN4-215ENST00000491592 RGL2O15211 777 aa10.49□□□□□ -0.73
RTN4-215ENST00000491592 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
RTN4-215ENST00000491592 PYGBP11216 843 aa10.47□□□□□ -0.73
RTN4-215ENST00000491592 PLCG2P16885 1265 aa10.45□□□□□ -0.74
RTN4-215ENST00000491592 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
RTN4-215ENST00000491592 IRX5P78411 483 aaPredicted RBP10.4□□□□□ -0.74
RTN4-215ENST00000491592 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
RTN4-215ENST00000491592 PCDHB8Q9UN66 801 aa10.39□□□□□ -0.75
RTN4-215ENST00000491592 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
RTN4-215ENST00000491592 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
RTN4-215ENST00000491592 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
RTN4-215ENST00000491592 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
RTN4-215ENST00000491592 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
RTN4-215ENST00000491592 GOLGA2Q08379 1002 aa10.32□□□□□ -0.76
RTN4-215ENST00000491592 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
RTN4-215ENST00000491592 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
RTN4-215ENST00000491592 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
RTN4-215ENST00000491592 TAOK2Q9UL54 1235 aa10.29□□□□□ -0.76
RTN4-215ENST00000491592 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
RTN4-215ENST00000491592 SLC24A1O60721 1099 aa10.27□□□□□ -0.77
RTN4-215ENST00000491592 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
RTN4-215ENST00000491592 SNPHO15079 494 aa10.26□□□□□ -0.77
RTN4-215ENST00000491592 ST18O60284 1047 aa10.25□□□□□ -0.77
RTN4-215ENST00000491592 PSEN1P49768 467 aa10.25□□□□□ -0.77
RTN4-215ENST00000491592 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
RTN4-215ENST00000491592 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
RTN4-215ENST00000491592 PLCB2Q00722 1185 aa10.23□□□□□ -0.77
RTN4-215ENST00000491592 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
RTN4-215ENST00000491592 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
RTN4-215ENST00000491592 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
RTN4-215ENST00000491592 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
RTN4-215ENST00000491592 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
RTN4-215ENST00000491592 STK25O00506 426 aa10.21□□□□□ -0.77
RTN4-215ENST00000491592 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
RTN4-215ENST00000491592 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.77
RTN4-215ENST00000491592 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
RTN4-215ENST00000491592 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
RTN4-215ENST00000491592 BCL11BQ9C0K0 894 aaPredicted RBP10.18□□□□□ -0.78
RTN4-215ENST00000491592 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
RTN4-215ENST00000491592 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
RTN4-215ENST00000491592 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
RTN4-215ENST00000491592 ILDR1Q86SU0 546 aaPredicted RBP10.13□□□□□ -0.79
RTN4-215ENST00000491592 CABP2Q9NPB3 220 aa10.12□□□□□ -0.79
RTN4-215ENST00000491592 G3V3G9 751 aa10.11□□□□□ -0.79
RTN4-215ENST00000491592 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
RTN4-215ENST00000491592 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
RTN4-215ENST00000491592 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
RTN4-215ENST00000491592 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
RTN4-215ENST00000491592 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
RTN4-215ENST00000491592 MARVELD3Q96A59 401 aa10.05□□□□□ -0.8
RTN4-215ENST00000491592 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms