RNA–Protein interactions for RNA: ENST00000491299.5

CMSS1-206, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-206ENST00000491299 SPDYE6P0CI01 402 aa15.45■□□□□ 0.06
CMSS1-206ENST00000491299 SPDYE2Q495Y8 402 aa15.45■□□□□ 0.06
CMSS1-206ENST00000491299 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
CMSS1-206ENST00000491299 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
CMSS1-206ENST00000491299 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
CMSS1-206ENST00000491299 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-206ENST00000491299 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
CMSS1-206ENST00000491299 SSUH2Q9Y2M2 353 aa15.29■□□□□ 0.04
CMSS1-206ENST00000491299 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
CMSS1-206ENST00000491299 TOPBP1Q92547 1522 aa15.27■□□□□ 0.03
CMSS1-206ENST00000491299 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
CMSS1-206ENST00000491299 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
CMSS1-206ENST00000491299 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
CMSS1-206ENST00000491299 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
CMSS1-206ENST00000491299 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
CMSS1-206ENST00000491299 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
CMSS1-206ENST00000491299 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
CMSS1-206ENST00000491299 POTEHQ6S545 545 aa15.11■□□□□ 0.01
CMSS1-206ENST00000491299 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
CMSS1-206ENST00000491299 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
CMSS1-206ENST00000491299 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
CMSS1-206ENST00000491299 CUX1P39880 1505 aa15.08■□□□□ 0.01
CMSS1-206ENST00000491299 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
CMSS1-206ENST00000491299 SOGA1O94964 1423 aa15.07■□□□□ 0
CMSS1-206ENST00000491299 WDR97A6NE52 1622 aa15.04■□□□□ -0
CMSS1-206ENST00000491299 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
CMSS1-206ENST00000491299 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
CMSS1-206ENST00000491299 TDRD9Q8NDG6 1382 aaKnown RBP14.98□□□□□ -0.01
CMSS1-206ENST00000491299 CHD1O14646 1710 aa14.97□□□□□ -0.01
CMSS1-206ENST00000491299 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
CMSS1-206ENST00000491299 BIVM-ERCC5R4GMW8 1640 aa14.96□□□□□ -0.01
CMSS1-206ENST00000491299 PIP4P2Q8N4L2 257 aa14.96□□□□□ -0.01
CMSS1-206ENST00000491299 TOP2BQ02880 1626 aa14.95□□□□□ -0.02
CMSS1-206ENST00000491299 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
CMSS1-206ENST00000491299 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
CMSS1-206ENST00000491299 FKBP8Q14318 412 aa14.92□□□□□ -0.02
CMSS1-206ENST00000491299 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
CMSS1-206ENST00000491299 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
CMSS1-206ENST00000491299 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
CMSS1-206ENST00000491299 MAGI1Q96QZ7 1491 aaPredicted RBP14.91□□□□□ -0.02
CMSS1-206ENST00000491299 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
CMSS1-206ENST00000491299 GAPVD1Q14C86 1478 aa14.9□□□□□ -0.02
CMSS1-206ENST00000491299 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
CMSS1-206ENST00000491299 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
CMSS1-206ENST00000491299 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
CMSS1-206ENST00000491299 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
CMSS1-206ENST00000491299 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
CMSS1-206ENST00000491299 RIMBP3CA6NJZ7 1639 aa14.84□□□□□ -0.03
CMSS1-206ENST00000491299 RIMBP3BA6NNM3 1639 aa14.84□□□□□ -0.03
CMSS1-206ENST00000491299 RIMBP3Q9UFD9 1639 aa14.84□□□□□ -0.03
CMSS1-206ENST00000491299 PROM2Q8N271 834 aa14.82□□□□□ -0.04
CMSS1-206ENST00000491299 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
CMSS1-206ENST00000491299 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
CMSS1-206ENST00000491299 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
CMSS1-206ENST00000491299 ADAMTS12P58397 1594 aa14.77□□□□□ -0.05
CMSS1-206ENST00000491299 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
CMSS1-206ENST00000491299 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
CMSS1-206ENST00000491299 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
CMSS1-206ENST00000491299 GRIN2AQ12879 1464 aa14.73□□□□□ -0.05
CMSS1-206ENST00000491299 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
CMSS1-206ENST00000491299 KIF27Q86VH2 1401 aa14.68□□□□□ -0.06
CMSS1-206ENST00000491299 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
CMSS1-206ENST00000491299 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
CMSS1-206ENST00000491299 CUL7Q14999 1698 aa14.65□□□□□ -0.06
CMSS1-206ENST00000491299 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
CMSS1-206ENST00000491299 NUP160Q12769 1436 aa14.64□□□□□ -0.07
CMSS1-206ENST00000491299 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
CMSS1-206ENST00000491299 HAX1O00165 279 aa14.58□□□□□ -0.08
CMSS1-206ENST00000491299 IGF1RP08069 1367 aa14.57□□□□□ -0.08
CMSS1-206ENST00000491299 SHROOM2Q13796 1616 aa14.56□□□□□ -0.08
CMSS1-206ENST00000491299 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
CMSS1-206ENST00000491299 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
CMSS1-206ENST00000491299 CARMIL1Q5VZK9 1371 aa14.52□□□□□ -0.08
CMSS1-206ENST00000491299 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
CMSS1-206ENST00000491299 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
CMSS1-206ENST00000491299 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
CMSS1-206ENST00000491299 KIAA0586Q9BVV6 1533 aa14.48□□□□□ -0.09
CMSS1-206ENST00000491299 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
CMSS1-206ENST00000491299 MIER1Q8N108 512 aa14.43□□□□□ -0.1
CMSS1-206ENST00000491299 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
CMSS1-206ENST00000491299 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
CMSS1-206ENST00000491299 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
CMSS1-206ENST00000491299 EVX2Q03828 476 aa14.41□□□□□ -0.1
CMSS1-206ENST00000491299 PLEKHG5O94827 1062 aa14.4□□□□□ -0.1
CMSS1-206ENST00000491299 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
CMSS1-206ENST00000491299 CARMIL2Q6F5E8 1435 aa14.39□□□□□ -0.11
CMSS1-206ENST00000491299 CTTNBP2Q8WZ74 1663 aa14.37□□□□□ -0.11
CMSS1-206ENST00000491299 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
CMSS1-206ENST00000491299 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
CMSS1-206ENST00000491299 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
CMSS1-206ENST00000491299 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CMSS1-206ENST00000491299 EEA1Q15075 1411 aa14.32□□□□□ -0.12
CMSS1-206ENST00000491299 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
CMSS1-206ENST00000491299 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
CMSS1-206ENST00000491299 PTPRGP23470 1445 aa14.31□□□□□ -0.12
CMSS1-206ENST00000491299 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
CMSS1-206ENST00000491299 ADCY10Q96PN6 1610 aa14.3□□□□□ -0.12
CMSS1-206ENST00000491299 UGGT2Q9NYU1 1516 aa14.3□□□□□ -0.12
CMSS1-206ENST00000491299 KIAA0556O60303 1618 aa14.28□□□□□ -0.12
CMSS1-206ENST00000491299 DISP1Q96F81 1524 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms