RNA–Protein interactions for RNA: ENST00000490914.1

SSB-211, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-211ENST00000490914 ZBTB47Q9UFB7 747 aaPredicted RBP15.02■□□□□ -0
SSB-211ENST00000490914 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
SSB-211ENST00000490914 NUBP1P53384 320 aa15□□□□□ -0.01
SSB-211ENST00000490914 MS4A3Q96HJ5 214 aa14.94□□□□□ -0.02
SSB-211ENST00000490914 LHX8Q68G74 356 aa14.9□□□□□ -0.02
SSB-211ENST00000490914 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
SSB-211ENST00000490914 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
SSB-211ENST00000490914 MAP3K13O43283 966 aa14.84□□□□□ -0.03
SSB-211ENST00000490914 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
SSB-211ENST00000490914 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
SSB-211ENST00000490914 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
SSB-211ENST00000490914 TRPC6Q9Y210 931 aa14.77□□□□□ -0.05
SSB-211ENST00000490914 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
SSB-211ENST00000490914 ATMINO43313 823 aaPredicted RBP14.72□□□□□ -0.05
SSB-211ENST00000490914 ASTLQ6HA08 431 aaPredicted RBP14.72□□□□□ -0.05
SSB-211ENST00000490914 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.05
SSB-211ENST00000490914 PYGBP11216 843 aa14.69□□□□□ -0.06
SSB-211ENST00000490914 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
SSB-211ENST00000490914 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
SSB-211ENST00000490914 SGIP1Q9BQI5 828 aa14.67□□□□□ -0.06
SSB-211ENST00000490914 BMP2KQ9NSY1 1161 aaPredicted RBP14.67□□□□□ -0.06
SSB-211ENST00000490914 ATN1P54259 1190 aaPredicted RBP14.66□□□□□ -0.06
SSB-211ENST00000490914 GSE1Q14687 1217 aa14.63□□□□□ -0.07
SSB-211ENST00000490914 TIE1P35590 1138 aa14.62□□□□□ -0.07
SSB-211ENST00000490914 SLC39A7Q92504 469 aa14.61□□□□□ -0.07
SSB-211ENST00000490914 METRNQ9UJH8 293 aa14.61□□□□□ -0.07
SSB-211ENST00000490914 TTLL13PA6NNM8 815 aa14.58□□□□□ -0.08
SSB-211ENST00000490914 C7P10643 843 aa14.58□□□□□ -0.08
SSB-211ENST00000490914 POTEB2H3BUK9 544 aa14.56□□□□□ -0.08
SSB-211ENST00000490914 CIZ1Q9ULV3 898 aaPredicted RBP14.55□□□□□ -0.08
SSB-211ENST00000490914 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
SSB-211ENST00000490914 TMEM106CQ9BVX2 250 aa14.5□□□□□ -0.09
SSB-211ENST00000490914 CHRM1P11229 460 aaPredicted RBP14.49□□□□□ -0.09
SSB-211ENST00000490914 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
SSB-211ENST00000490914 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
SSB-211ENST00000490914 POTEFA5A3E0 1075 aa14.46□□□□□ -0.09
SSB-211ENST00000490914 POTEJP0CG39 1038 aa14.42□□□□□ -0.1
SSB-211ENST00000490914 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
SSB-211ENST00000490914 COLQQ9Y215 455 aaPredicted RBP14.4□□□□□ -0.1
SSB-211ENST00000490914 SEC24BO95487 1268 aa14.39□□□□□ -0.11
SSB-211ENST00000490914 IER5LQ5T953 404 aa14.36□□□□□ -0.11
SSB-211ENST00000490914 MAMSTRQ6ZN01 415 aa14.35□□□□□ -0.11
SSB-211ENST00000490914 PSEN1P49768 467 aa14.32□□□□□ -0.12
SSB-211ENST00000490914 SCUBE2Q9NQ36 999 aa14.3□□□□□ -0.12
SSB-211ENST00000490914 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
SSB-211ENST00000490914 IRX5P78411 483 aaPredicted RBP14.28□□□□□ -0.12
SSB-211ENST00000490914 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
SSB-211ENST00000490914 PLCG2P16885 1265 aa14.24□□□□□ -0.13
SSB-211ENST00000490914 RNF25Q96BH1 459 aaPredicted RBP14.23□□□□□ -0.13
SSB-211ENST00000490914 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
SSB-211ENST00000490914 OCEL1Q9H607 264 aa14.19□□□□□ -0.14
SSB-211ENST00000490914 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
SSB-211ENST00000490914 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
SSB-211ENST00000490914 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
SSB-211ENST00000490914 PDCD7Q8N8D1 485 aaKnown RBP14.13□□□□□ -0.15
SSB-211ENST00000490914 PKD2Q13563 968 aa14.12□□□□□ -0.15
SSB-211ENST00000490914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.151e-8■■■■□ 24.4
SSB-211ENST00000490914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.16
SSB-211ENST00000490914 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
SSB-211ENST00000490914 ZFP91Q96JP5 570 aaPredicted RBP14.08□□□□□ -0.16
SSB-211ENST00000490914 VGFO15240 615 aaPredicted RBP14.06□□□□□ -0.16
SSB-211ENST00000490914 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
SSB-211ENST00000490914 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
SSB-211ENST00000490914 FAM163AQ96GL9 167 aaPredicted RBP14.04□□□□□ -0.16
SSB-211ENST00000490914 SLAIN1Q8ND83 568 aa14.03□□□□□ -0.16
SSB-211ENST00000490914 POTEMA6NI47 508 aa14.02□□□□□ -0.17
SSB-211ENST00000490914 DPY19L2Q6NUT2 758 aa14.02□□□□□ -0.17
SSB-211ENST00000490914 RGL2O15211 777 aa14.01□□□□□ -0.17
SSB-211ENST00000490914 POTEGQ6S5H5 508 aa14□□□□□ -0.17
SSB-211ENST00000490914 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.17
SSB-211ENST00000490914 LCE2DQ5TA82 110 aaPredicted RBP13.95□□□□□ -0.18
SSB-211ENST00000490914 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
SSB-211ENST00000490914 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
SSB-211ENST00000490914 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
SSB-211ENST00000490914 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
SSB-211ENST00000490914 STK24Q9Y6E0 443 aa13.9□□□□□ -0.18
SSB-211ENST00000490914 STK25O00506 426 aa13.88□□□□□ -0.19
SSB-211ENST00000490914 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
SSB-211ENST00000490914 SOX12O15370 315 aa13.87□□□□□ -0.19
SSB-211ENST00000490914 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
SSB-211ENST00000490914 BOLA1Q9Y3E2 137 aa13.87□□□□□ -0.19
SSB-211ENST00000490914 G3V3G9 751 aa13.84□□□□□ -0.19
SSB-211ENST00000490914 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
SSB-211ENST00000490914 ST18O60284 1047 aa13.8□□□□□ -0.2
SSB-211ENST00000490914 SNPHO15079 494 aa13.79□□□□□ -0.2
SSB-211ENST00000490914 FBXO22Q8NEZ5 403 aa13.79□□□□□ -0.2
SSB-211ENST00000490914 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
SSB-211ENST00000490914 MFRPQ9BY79 579 aa13.78□□□□□ -0.2
SSB-211ENST00000490914 NLRP6P59044 892 aa13.76□□□□□ -0.21
SSB-211ENST00000490914 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SSB-211ENST00000490914 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
SSB-211ENST00000490914 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
SSB-211ENST00000490914 HS6ST3Q8IZP7 471 aa13.67□□□□□ -0.22
SSB-211ENST00000490914 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
SSB-211ENST00000490914 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
SSB-211ENST00000490914 MARVELD3Q96A59 401 aa13.62□□□□□ -0.23
SSB-211ENST00000490914 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
SSB-211ENST00000490914 PPP1R37O75864 691 aa13.58□□□□□ -0.24
SSB-211ENST00000490914 EMP3P54852 163 aa13.55□□□□□ -0.24
SSB-211ENST00000490914 NKX1-1Q15270 411 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms