RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
SNX12-205ENST00000490561 KIAA0586Q9BVV6 1533 aa21.39■■□□□ 1.02
SNX12-205ENST00000490561 CEP170Q5SW79 1584 aa21.39■■□□□ 1.01
SNX12-205ENST00000490561 IQGAP2Q13576 1575 aa21.34■■□□□ 1.01
SNX12-205ENST00000490561 OSCARQ8IYS5 282 aa21.33■■□□□ 1.01
SNX12-205ENST00000490561 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
SNX12-205ENST00000490561 UGGT2Q9NYU1 1516 aa21.26■□□□□ 0.99
SNX12-205ENST00000490561 CEP162Q5TB80 1403 aa21.24■□□□□ 0.99
SNX12-205ENST00000490561 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
SNX12-205ENST00000490561 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
SNX12-205ENST00000490561 CLIP1P30622 1438 aa21.22■□□□□ 0.99
SNX12-205ENST00000490561 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
SNX12-205ENST00000490561 SHROOM2Q13796 1616 aa21.21■□□□□ 0.99
SNX12-205ENST00000490561 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
SNX12-205ENST00000490561 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
SNX12-205ENST00000490561 ARHGAP35Q9NRY4 1499 aa21.13■□□□□ 0.97
SNX12-205ENST00000490561 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
SNX12-205ENST00000490561 PRG4Q92954 1404 aaPredicted RBP21.12■□□□□ 0.97
SNX12-205ENST00000490561 KIAA0556O60303 1618 aa21.12■□□□□ 0.97
SNX12-205ENST00000490561 DISP1Q96F81 1524 aa21.12■□□□□ 0.97
SNX12-205ENST00000490561 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
SNX12-205ENST00000490561 FHOD3Q2V2M9 1422 aa21.04■□□□□ 0.96
SNX12-205ENST00000490561 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
SNX12-205ENST00000490561 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
SNX12-205ENST00000490561 PTPRGP23470 1445 aa20.97■□□□□ 0.95
SNX12-205ENST00000490561 VPS8Q8N3P4 1428 aa20.97■□□□□ 0.95
SNX12-205ENST00000490561 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
SNX12-205ENST00000490561 ARHGEF11O15085 1522 aa20.95■□□□□ 0.94
SNX12-205ENST00000490561 CASKIN1Q8WXD9 1431 aa20.9■□□□□ 0.94
SNX12-205ENST00000490561 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
SNX12-205ENST00000490561 RIMBP3CA6NJZ7 1639 aa20.88■□□□□ 0.93
SNX12-205ENST00000490561 RIMBP3BA6NNM3 1639 aa20.88■□□□□ 0.93
SNX12-205ENST00000490561 RIMBP3Q9UFD9 1639 aa20.88■□□□□ 0.93
SNX12-205ENST00000490561 HECW1Q76N89 1606 aa20.86■□□□□ 0.93
SNX12-205ENST00000490561 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
SNX12-205ENST00000490561 ABCA8O94911 1581 aa20.85■□□□□ 0.93
SNX12-205ENST00000490561 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
SNX12-205ENST00000490561 UACAQ9BZF9 1416 aa20.85■□□□□ 0.93
SNX12-205ENST00000490561 PCF11O94913 1555 aaKnown RBP20.85■□□□□ 0.93
SNX12-205ENST00000490561 UHRF1BP1LA0JNW5 1464 aa20.83■□□□□ 0.93
SNX12-205ENST00000490561 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
SNX12-205ENST00000490561 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
SNX12-205ENST00000490561 CCDC18Q5T9S5 1454 aa20.8■□□□□ 0.92
SNX12-205ENST00000490561 APLP2Q06481 763 aa20.78■□□□□ 0.92
SNX12-205ENST00000490561 NUP153P49790 1475 aaKnown RBP20.76■□□□□ 0.91
SNX12-205ENST00000490561 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
SNX12-205ENST00000490561 MAP3K1Q13233 1512 aa20.76■□□□□ 0.91
SNX12-205ENST00000490561 EPRSP07814 1512 aaKnown RBP20.73■□□□□ 0.91
SNX12-205ENST00000490561 ADCY10Q96PN6 1610 aa20.71■□□□□ 0.91
SNX12-205ENST00000490561 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
SNX12-205ENST00000490561 KDM5BQ9UGL1 1544 aa20.69■□□□□ 0.9
SNX12-205ENST00000490561 TIAM1Q13009 1591 aa20.69■□□□□ 0.9
SNX12-205ENST00000490561 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
SNX12-205ENST00000490561 CFAP43Q8NDM7 1665 aa20.69■□□□□ 0.9
SNX12-205ENST00000490561 NPM1P06748 294 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNX12-205ENST00000490561 ATP10BO94823 1461 aa20.67■□□□□ 0.9
SNX12-205ENST00000490561 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
SNX12-205ENST00000490561 LRRIQ1Q96JM4 1722 aa20.64■□□□□ 0.9
SNX12-205ENST00000490561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SNX12-205ENST00000490561 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
SNX12-205ENST00000490561 ZCCHC11Q5TAX3 1644 aaKnown RBP20.63■□□□□ 0.89
SNX12-205ENST00000490561 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
SNX12-205ENST00000490561 LRRC9Q6ZRR7 1453 aa20.6■□□□□ 0.89
SNX12-205ENST00000490561 MTUS2Q5JR59 1369 aa20.59■□□□□ 0.89
SNX12-205ENST00000490561 EHBP1L1Q8N3D4 1523 aa20.59■□□□□ 0.89
SNX12-205ENST00000490561 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
SNX12-205ENST00000490561 TROQ12816 1431 aaPredicted RBP20.56■□□□□ 0.88
SNX12-205ENST00000490561 MAPKBP1O60336 1514 aa20.53■□□□□ 0.88
SNX12-205ENST00000490561 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
SNX12-205ENST00000490561 KANK4Q5T7N3 995 aaPredicted RBP20.51■□□□□ 0.87
SNX12-205ENST00000490561 MAGI3Q5TCQ9 1506 aa20.51■□□□□ 0.87
SNX12-205ENST00000490561 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
SNX12-205ENST00000490561 SUPT6HQ7KZ85 1726 aaKnown RBP20.49■□□□□ 0.87
SNX12-205ENST00000490561 KIF14Q15058 1648 aa20.48■□□□□ 0.87
SNX12-205ENST00000490561 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
SNX12-205ENST00000490561 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
SNX12-205ENST00000490561 ABCC10Q5T3U5 1492 aa20.38■□□□□ 0.85
SNX12-205ENST00000490561 KCNH8Q96L42 1107 aa20.38■□□□□ 0.85
SNX12-205ENST00000490561 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
SNX12-205ENST00000490561 GLI2P10070 1586 aa20.36■□□□□ 0.85
SNX12-205ENST00000490561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX12-205ENST00000490561 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SNX12-205ENST00000490561 ABCA9Q8IUA7 1624 aa20.35■□□□□ 0.85
SNX12-205ENST00000490561 ITSN2Q9NZM3 1697 aa20.34■□□□□ 0.85
SNX12-205ENST00000490561 PHLDB1Q86UU1 1377 aa20.33■□□□□ 0.84
SNX12-205ENST00000490561 TTC37Q6PGP7 1564 aa20.32■□□□□ 0.84
SNX12-205ENST00000490561 DIP2BQ9P265 1576 aa20.31■□□□□ 0.84
SNX12-205ENST00000490561 MIA2Q96PC5 1412 aa20.31■□□□□ 0.84
SNX12-205ENST00000490561 ARAP3Q8WWN8 1544 aa20.31■□□□□ 0.84
SNX12-205ENST00000490561 GPATCH8Q9UKJ3 1502 aaKnown RBP20.31■□□□□ 0.84
SNX12-205ENST00000490561 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
SNX12-205ENST00000490561 PLCH2O75038 1416 aa20.28■□□□□ 0.84
SNX12-205ENST00000490561 PREX2Q70Z35 1606 aa20.28■□□□□ 0.84
SNX12-205ENST00000490561 FGD6Q6ZV73 1430 aa20.27■□□□□ 0.84
SNX12-205ENST00000490561 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.83
SNX12-205ENST00000490561 RRBP1Q9P2E9 1410 aaKnown RBP20.27■□□□□ 0.83
SNX12-205ENST00000490561 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
SNX12-205ENST00000490561 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
SNX12-205ENST00000490561 CD109Q6YHK3 1445 aa20.26■□□□□ 0.83
SNX12-205ENST00000490561 MAP3K4Q9Y6R4 1608 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms