RNA–Protein interactions for RNA: ENST00000490205.1

NELFCD-210, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 650 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-210ENST00000490205 POTEIP0CG38 1075 aa11.82□□□□□ -0.52
NELFCD-210ENST00000490205 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
NELFCD-210ENST00000490205 NUBP1P53384 320 aa11.8□□□□□ -0.52
NELFCD-210ENST00000490205 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
NELFCD-210ENST00000490205 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
NELFCD-210ENST00000490205 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
NELFCD-210ENST00000490205 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
NELFCD-210ENST00000490205 MAP3K13O43283 966 aa11.7□□□□□ -0.54
NELFCD-210ENST00000490205 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
NELFCD-210ENST00000490205 LHX8Q68G74 356 aa11.67□□□□□ -0.54
NELFCD-210ENST00000490205 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
NELFCD-210ENST00000490205 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
NELFCD-210ENST00000490205 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
NELFCD-210ENST00000490205 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
NELFCD-210ENST00000490205 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
NELFCD-210ENST00000490205 GSE1Q14687 1217 aa11.6□□□□□ -0.55
NELFCD-210ENST00000490205 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
NELFCD-210ENST00000490205 TIE1P35590 1138 aa11.58□□□□□ -0.56
NELFCD-210ENST00000490205 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
NELFCD-210ENST00000490205 TRPC6Q9Y210 931 aa11.58□□□□□ -0.56
NELFCD-210ENST00000490205 PYGBP11216 843 aa11.57□□□□□ -0.56
NELFCD-210ENST00000490205 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
NELFCD-210ENST00000490205 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
NELFCD-210ENST00000490205 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
NELFCD-210ENST00000490205 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
NELFCD-210ENST00000490205 C7P10643 843 aa11.53□□□□□ -0.56
NELFCD-210ENST00000490205 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
NELFCD-210ENST00000490205 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
NELFCD-210ENST00000490205 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
NELFCD-210ENST00000490205 CHRM1P11229 460 aaPredicted RBP11.46□□□□□ -0.57
NELFCD-210ENST00000490205 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
NELFCD-210ENST00000490205 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
NELFCD-210ENST00000490205 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
NELFCD-210ENST00000490205 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
NELFCD-210ENST00000490205 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
NELFCD-210ENST00000490205 IER5LQ5T953 404 aa11.39□□□□□ -0.59
NELFCD-210ENST00000490205 SEC24BO95487 1268 aa11.38□□□□□ -0.59
NELFCD-210ENST00000490205 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
NELFCD-210ENST00000490205 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
NELFCD-210ENST00000490205 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
NELFCD-210ENST00000490205 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
NELFCD-210ENST00000490205 COLQQ9Y215 455 aaPredicted RBP11.32□□□□□ -0.6
NELFCD-210ENST00000490205 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
NELFCD-210ENST00000490205 PSEN1P49768 467 aa11.3□□□□□ -0.6
NELFCD-210ENST00000490205 PLCG2P16885 1265 aa11.28□□□□□ -0.6
NELFCD-210ENST00000490205 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
NELFCD-210ENST00000490205 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
NELFCD-210ENST00000490205 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
NELFCD-210ENST00000490205 IRX5P78411 483 aaPredicted RBP11.26□□□□□ -0.61
NELFCD-210ENST00000490205 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
NELFCD-210ENST00000490205 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
NELFCD-210ENST00000490205 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
NELFCD-210ENST00000490205 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
NELFCD-210ENST00000490205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.621e-12■□□□□ 8.5
NELFCD-210ENST00000490205 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
NELFCD-210ENST00000490205 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
NELFCD-210ENST00000490205 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
NELFCD-210ENST00000490205 ECM2O94769 699 aaPredicted RBP11.1□□□□□ -0.63
NELFCD-210ENST00000490205 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
NELFCD-210ENST00000490205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.08□□□□□ -0.64
NELFCD-210ENST00000490205 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
NELFCD-210ENST00000490205 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
NELFCD-210ENST00000490205 ZFP91Q96JP5 570 aaPredicted RBP11.08□□□□□ -0.64
NELFCD-210ENST00000490205 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
NELFCD-210ENST00000490205 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
NELFCD-210ENST00000490205 PKD2Q13563 968 aa11.05□□□□□ -0.64
NELFCD-210ENST00000490205 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
NELFCD-210ENST00000490205 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
NELFCD-210ENST00000490205 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
NELFCD-210ENST00000490205 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
NELFCD-210ENST00000490205 G3V3G9 751 aa11□□□□□ -0.65
NELFCD-210ENST00000490205 SOX12O15370 315 aa10.99□□□□□ -0.65
NELFCD-210ENST00000490205 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
NELFCD-210ENST00000490205 RGL2O15211 777 aa10.97□□□□□ -0.65
NELFCD-210ENST00000490205 BOLA1Q9Y3E2 137 aa10.97□□□□□ -0.65
NELFCD-210ENST00000490205 POTEMA6NI47 508 aa10.96□□□□□ -0.65
NELFCD-210ENST00000490205 STK24Q9Y6E0 443 aa10.96□□□□□ -0.65
NELFCD-210ENST00000490205 STK25O00506 426 aa10.95□□□□□ -0.66
NELFCD-210ENST00000490205 POTEGQ6S5H5 508 aa10.94□□□□□ -0.66
NELFCD-210ENST00000490205 LCE2DQ5TA82 110 aaPredicted RBP10.93□□□□□ -0.66
NELFCD-210ENST00000490205 SNPHO15079 494 aa10.92□□□□□ -0.66
NELFCD-210ENST00000490205 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
NELFCD-210ENST00000490205 NLRP6P59044 892 aa10.89□□□□□ -0.67
NELFCD-210ENST00000490205 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
NELFCD-210ENST00000490205 TMEM121BQ9BXQ6 578 aaPredicted RBP10.88□□□□□ -0.67
NELFCD-210ENST00000490205 ST18O60284 1047 aa10.86□□□□□ -0.67
NELFCD-210ENST00000490205 MICALL2Q8IY33 904 aa10.84□□□□□ -0.67
NELFCD-210ENST00000490205 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
NELFCD-210ENST00000490205 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
NELFCD-210ENST00000490205 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
NELFCD-210ENST00000490205 HS6ST3Q8IZP7 471 aa10.76□□□□□ -0.69
NELFCD-210ENST00000490205 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
NELFCD-210ENST00000490205 TMEM92Q6UXU6 159 aa10.73□□□□□ -0.69
NELFCD-210ENST00000490205 DOK7Q18PE1 504 aa10.71□□□□□ -0.69
NELFCD-210ENST00000490205 HOXB3P14651 431 aaPredicted RBP10.7□□□□□ -0.7
NELFCD-210ENST00000490205 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
NELFCD-210ENST00000490205 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
NELFCD-210ENST00000490205 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
NELFCD-210ENST00000490205 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
NELFCD-210ENST00000490205 RIMBP2O15034 1052 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms