RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 MS4A3Q96HJ5 214 aa12.92□□□□□ -0.34
PDCD4-209ENST00000489049 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
PDCD4-209ENST00000489049 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
PDCD4-209ENST00000489049 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
PDCD4-209ENST00000489049 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
PDCD4-209ENST00000489049 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
PDCD4-209ENST00000489049 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
PDCD4-209ENST00000489049 NUBP1P53384 320 aa12.78□□□□□ -0.36
PDCD4-209ENST00000489049 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
PDCD4-209ENST00000489049 MAP3K13O43283 966 aa12.76□□□□□ -0.37
PDCD4-209ENST00000489049 POTEB2H3BUK9 544 aa12.72□□□□□ -0.37
PDCD4-209ENST00000489049 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
PDCD4-209ENST00000489049 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
PDCD4-209ENST00000489049 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
PDCD4-209ENST00000489049 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
PDCD4-209ENST00000489049 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
PDCD4-209ENST00000489049 C7P10643 843 aa12.68□□□□□ -0.38
PDCD4-209ENST00000489049 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
PDCD4-209ENST00000489049 TIE1P35590 1138 aa12.66□□□□□ -0.38
PDCD4-209ENST00000489049 OTUD5Q96G74 571 aa12.66□□□□□ -0.38
PDCD4-209ENST00000489049 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
PDCD4-209ENST00000489049 PCDHB13Q9Y5F0 798 aa12.64□□□□□ -0.39
PDCD4-209ENST00000489049 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
PDCD4-209ENST00000489049 TTLL13PA6NNM8 815 aa12.59□□□□□ -0.39
PDCD4-209ENST00000489049 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
PDCD4-209ENST00000489049 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
PDCD4-209ENST00000489049 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
PDCD4-209ENST00000489049 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
PDCD4-209ENST00000489049 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
PDCD4-209ENST00000489049 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
PDCD4-209ENST00000489049 PYGBP11216 843 aa12.51□□□□□ -0.41
PDCD4-209ENST00000489049 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
PDCD4-209ENST00000489049 MAMSTRQ6ZN01 415 aa12.48□□□□□ -0.41
PDCD4-209ENST00000489049 IER5LQ5T953 404 aa12.47□□□□□ -0.41
PDCD4-209ENST00000489049 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
PDCD4-209ENST00000489049 COLQQ9Y215 455 aaPredicted RBP12.46□□□□□ -0.41
PDCD4-209ENST00000489049 SEC24BO95487 1268 aa12.45□□□□□ -0.42
PDCD4-209ENST00000489049 GSE1Q14687 1217 aa12.45□□□□□ -0.42
PDCD4-209ENST00000489049 SCUBE2Q9NQ36 999 aa12.43□□□□□ -0.42
PDCD4-209ENST00000489049 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
PDCD4-209ENST00000489049 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
PDCD4-209ENST00000489049 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
PDCD4-209ENST00000489049 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
PDCD4-209ENST00000489049 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
PDCD4-209ENST00000489049 IRX5P78411 483 aaPredicted RBP12.33□□□□□ -0.44
PDCD4-209ENST00000489049 PLCG2P16885 1265 aa12.32□□□□□ -0.44
PDCD4-209ENST00000489049 POTEMA6NI47 508 aa12.28□□□□□ -0.44
PDCD4-209ENST00000489049 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
PDCD4-209ENST00000489049 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
PDCD4-209ENST00000489049 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
PDCD4-209ENST00000489049 PSEN1P49768 467 aa12.23□□□□□ -0.45
PDCD4-209ENST00000489049 LCE2DQ5TA82 110 aaPredicted RBP12.23□□□□□ -0.45
PDCD4-209ENST00000489049 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
PDCD4-209ENST00000489049 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
PDCD4-209ENST00000489049 PDAP1Q13442 181 aaKnown RBP12.18□□□□□ -0.46
PDCD4-209ENST00000489049 SLAIN1Q8ND83 568 aa12.18□□□□□ -0.46
PDCD4-209ENST00000489049 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
PDCD4-209ENST00000489049 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
PDCD4-209ENST00000489049 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
PDCD4-209ENST00000489049 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
PDCD4-209ENST00000489049 ZCCHC6Q5VYS8 1495 aaKnown RBP12.11□□□□□ -0.47
PDCD4-209ENST00000489049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.475e-24■□□□□ 10.2
PDCD4-209ENST00000489049 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
PDCD4-209ENST00000489049 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
PDCD4-209ENST00000489049 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
PDCD4-209ENST00000489049 ILDR1Q86SU0 546 aaPredicted RBP12.07□□□□□ -0.48
PDCD4-209ENST00000489049 L3MBTL3Q96JM7 780 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-209ENST00000489049 ST18O60284 1047 aa12.03□□□□□ -0.48
PDCD4-209ENST00000489049 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
PDCD4-209ENST00000489049 DCAF1Q9Y4B6 1507 aa12.02□□□□□ -0.48
PDCD4-209ENST00000489049 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
PDCD4-209ENST00000489049 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
PDCD4-209ENST00000489049 SNPHO15079 494 aa11.97□□□□□ -0.49
PDCD4-209ENST00000489049 RIOK3O14730 519 aaKnown RBP11.96□□□□□ -0.49
PDCD4-209ENST00000489049 EFCAB3Q8N7B9 438 aa11.95□□□□□ -0.5
PDCD4-209ENST00000489049 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
PDCD4-209ENST00000489049 G3V3G9 751 aa11.91□□□□□ -0.5
PDCD4-209ENST00000489049 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
PDCD4-209ENST00000489049 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
PDCD4-209ENST00000489049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
PDCD4-209ENST00000489049 CDAN1Q8IWY9 1227 aa11.9□□□□□ -0.5
PDCD4-209ENST00000489049 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
PDCD4-209ENST00000489049 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
PDCD4-209ENST00000489049 SOX12O15370 315 aa11.84□□□□□ -0.51
PDCD4-209ENST00000489049 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
PDCD4-209ENST00000489049 MS4A4AQ96JQ5 239 aa11.79□□□□□ -0.52
PDCD4-209ENST00000489049 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
PDCD4-209ENST00000489049 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
PDCD4-209ENST00000489049 MICALL2Q8IY33 904 aa11.78□□□□□ -0.52
PDCD4-209ENST00000489049 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
PDCD4-209ENST00000489049 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.53
PDCD4-209ENST00000489049 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
PDCD4-209ENST00000489049 EMP3P54852 163 aa11.76□□□□□ -0.53
PDCD4-209ENST00000489049 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
PDCD4-209ENST00000489049 PKD2Q13563 968 aa11.73□□□□□ -0.53
PDCD4-209ENST00000489049 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
PDCD4-209ENST00000489049 DCAF8L2P0C7V8 631 aa11.71□□□□□ -0.53
PDCD4-209ENST00000489049 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
PDCD4-209ENST00000489049 STK25O00506 426 aa11.7□□□□□ -0.54
PDCD4-209ENST00000489049 NLRP6P59044 892 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms