RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 CLCN6P51797 869 aa14.78□□□□□ -0.04
CTNNB1-215ENST00000488914 ZBTB47Q9UFB7 747 aaPredicted RBP14.78□□□□□ -0.04
CTNNB1-215ENST00000488914 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
CTNNB1-215ENST00000488914 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
CTNNB1-215ENST00000488914 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
CTNNB1-215ENST00000488914 KLHL34Q8N239 644 aa14.68□□□□□ -0.06
CTNNB1-215ENST00000488914 IFNLR1Q8IU57 520 aaPredicted RBP14.66□□□□□ -0.06
CTNNB1-215ENST00000488914 MAP3K13O43283 966 aa14.65□□□□□ -0.06
CTNNB1-215ENST00000488914 FAM212AQ96EL1 285 aa14.62□□□□□ -0.07
CTNNB1-215ENST00000488914 TRPC6Q9Y210 931 aa14.6□□□□□ -0.07
CTNNB1-215ENST00000488914 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
CTNNB1-215ENST00000488914 PELP1Q8IZL8 1130 aaKnown RBP14.57□□□□□ -0.08
CTNNB1-215ENST00000488914 ATMINO43313 823 aaPredicted RBP14.51□□□□□ -0.09
CTNNB1-215ENST00000488914 PYGBP11216 843 aa14.51□□□□□ -0.09
CTNNB1-215ENST00000488914 ASTLQ6HA08 431 aaPredicted RBP14.5□□□□□ -0.09
CTNNB1-215ENST00000488914 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
CTNNB1-215ENST00000488914 LHX8Q68G74 356 aa14.48□□□□□ -0.09
CTNNB1-215ENST00000488914 IFNL1Q8IU54 200 aa14.48□□□□□ -0.09
CTNNB1-215ENST00000488914 SPOCK2Q92563 424 aa14.48□□□□□ -0.09
CTNNB1-215ENST00000488914 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
CTNNB1-215ENST00000488914 ATN1P54259 1190 aaPredicted RBP14.46□□□□□ -0.09
CTNNB1-215ENST00000488914 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
CTNNB1-215ENST00000488914 GSE1Q14687 1217 aa14.42□□□□□ -0.1
CTNNB1-215ENST00000488914 TIE1P35590 1138 aa14.39□□□□□ -0.11
CTNNB1-215ENST00000488914 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
CTNNB1-215ENST00000488914 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
CTNNB1-215ENST00000488914 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
CTNNB1-215ENST00000488914 CIZ1Q9ULV3 898 aaPredicted RBP14.37□□□□□ -0.11
CTNNB1-215ENST00000488914 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
CTNNB1-215ENST00000488914 SLC39A7Q92504 469 aa14.32□□□□□ -0.12
CTNNB1-215ENST00000488914 CHRM1P11229 460 aaPredicted RBP14.3□□□□□ -0.12
CTNNB1-215ENST00000488914 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
CTNNB1-215ENST00000488914 C7P10643 843 aa14.29□□□□□ -0.12
CTNNB1-215ENST00000488914 POTEFA5A3E0 1075 aa14.28□□□□□ -0.12
CTNNB1-215ENST00000488914 TRIM35Q9UPQ4 493 aa14.28□□□□□ -0.12
CTNNB1-215ENST00000488914 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
CTNNB1-215ENST00000488914 COLQQ9Y215 455 aaPredicted RBP14.22□□□□□ -0.13
CTNNB1-215ENST00000488914 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
CTNNB1-215ENST00000488914 OTUD5Q96G74 571 aa14.2□□□□□ -0.14
CTNNB1-215ENST00000488914 PSEN1P49768 467 aa14.14□□□□□ -0.15
CTNNB1-215ENST00000488914 SEC24BO95487 1268 aa14.12□□□□□ -0.15
CTNNB1-215ENST00000488914 IER5LQ5T953 404 aa14.12□□□□□ -0.15
CTNNB1-215ENST00000488914 PDAP1Q13442 181 aaKnown RBP14.08□□□□□ -0.16
CTNNB1-215ENST00000488914 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
CTNNB1-215ENST00000488914 IRX5P78411 483 aaPredicted RBP14.07□□□□□ -0.16
CTNNB1-215ENST00000488914 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
CTNNB1-215ENST00000488914 PLCG2P16885 1265 aa14.01□□□□□ -0.17
CTNNB1-215ENST00000488914 PKD2Q13563 968 aa13.98□□□□□ -0.17
CTNNB1-215ENST00000488914 OCEL1Q9H607 264 aa13.98□□□□□ -0.17
CTNNB1-215ENST00000488914 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
CTNNB1-215ENST00000488914 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
CTNNB1-215ENST00000488914 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
CTNNB1-215ENST00000488914 MKRN3Q13064 507 aaKnown RBP13.96□□□□□ -0.17
CTNNB1-215ENST00000488914 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
CTNNB1-215ENST00000488914 PDCD7Q8N8D1 485 aaKnown RBP13.94□□□□□ -0.18
CTNNB1-215ENST00000488914 SCUBE2Q9NQ36 999 aa13.93□□□□□ -0.18
CTNNB1-215ENST00000488914 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
CTNNB1-215ENST00000488914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
CTNNB1-215ENST00000488914 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
CTNNB1-215ENST00000488914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.181e-7■■□□□ 11.4
CTNNB1-215ENST00000488914 RGL2O15211 777 aa13.87□□□□□ -0.19
CTNNB1-215ENST00000488914 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
CTNNB1-215ENST00000488914 DPY19L2Q6NUT2 758 aa13.87□□□□□ -0.19
CTNNB1-215ENST00000488914 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
CTNNB1-215ENST00000488914 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
CTNNB1-215ENST00000488914 SLAIN1Q8ND83 568 aa13.78□□□□□ -0.2
CTNNB1-215ENST00000488914 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
CTNNB1-215ENST00000488914 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
CTNNB1-215ENST00000488914 L3MBTL3Q96JM7 780 aaPredicted RBP13.73□□□□□ -0.21
CTNNB1-215ENST00000488914 STK24Q9Y6E0 443 aa13.73□□□□□ -0.21
CTNNB1-215ENST00000488914 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
CTNNB1-215ENST00000488914 PHF8Q9UPP1 1060 aa13.72□□□□□ -0.21
CTNNB1-215ENST00000488914 STK25O00506 426 aa13.71□□□□□ -0.21
CTNNB1-215ENST00000488914 MS4A4AQ96JQ5 239 aa13.71□□□□□ -0.21
CTNNB1-215ENST00000488914 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.71□□□□□ -0.21
CTNNB1-215ENST00000488914 SOX12O15370 315 aa13.69□□□□□ -0.22
CTNNB1-215ENST00000488914 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
CTNNB1-215ENST00000488914 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
CTNNB1-215ENST00000488914 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
CTNNB1-215ENST00000488914 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
CTNNB1-215ENST00000488914 MFRPQ9BY79 579 aa13.62□□□□□ -0.23
CTNNB1-215ENST00000488914 POTEMA6NI47 508 aa13.61□□□□□ -0.23
CTNNB1-215ENST00000488914 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
CTNNB1-215ENST00000488914 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
CTNNB1-215ENST00000488914 G3V3G9 751 aa13.58□□□□□ -0.24
CTNNB1-215ENST00000488914 NLRP6P59044 892 aa13.57□□□□□ -0.24
CTNNB1-215ENST00000488914 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
CTNNB1-215ENST00000488914 ST18O60284 1047 aa13.55□□□□□ -0.24
CTNNB1-215ENST00000488914 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
CTNNB1-215ENST00000488914 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
CTNNB1-215ENST00000488914 HS6ST3Q8IZP7 471 aa13.5□□□□□ -0.25
CTNNB1-215ENST00000488914 SNPHO15079 494 aa13.45□□□□□ -0.26
CTNNB1-215ENST00000488914 PPP1R37O75864 691 aa13.45□□□□□ -0.26
CTNNB1-215ENST00000488914 HOXB3P14651 431 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-215ENST00000488914 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-215ENST00000488914 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
CTNNB1-215ENST00000488914 DCAF8L2P0C7V8 631 aa13.34□□□□□ -0.27
CTNNB1-215ENST00000488914 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
CTNNB1-215ENST00000488914 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
CTNNB1-215ENST00000488914 KIF3CO14782 793 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms