RNA–Protein interactions for RNA: ENST00000488813.1

COA1-218, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 1,641 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-218ENST00000488813 THOC2Q8NI27 1593 aaKnown RBP16.16■□□□□ 0.18
COA1-218ENST00000488813 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.179e-6■□□□□ 10.2
COA1-218ENST00000488813 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
COA1-218ENST00000488813 TRIM26Q12899 539 aaPredicted RBP16.12■□□□□ 0.17
COA1-218ENST00000488813 CUL7Q14999 1698 aa16.12■□□□□ 0.17
COA1-218ENST00000488813 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
COA1-218ENST00000488813 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
COA1-218ENST00000488813 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
COA1-218ENST00000488813 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.16
COA1-218ENST00000488813 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
COA1-218ENST00000488813 ARHGAP35Q9NRY4 1499 aa16.04■□□□□ 0.16
COA1-218ENST00000488813 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
COA1-218ENST00000488813 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
COA1-218ENST00000488813 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
COA1-218ENST00000488813 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
COA1-218ENST00000488813 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
COA1-218ENST00000488813 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
COA1-218ENST00000488813 APLP2Q06481 763 aa15.96■□□□□ 0.15
COA1-218ENST00000488813 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
COA1-218ENST00000488813 MAGI1Q96QZ7 1491 aaPredicted RBP15.94■□□□□ 0.14
COA1-218ENST00000488813 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
COA1-218ENST00000488813 P3H3Q8IVL6 736 aa15.91■□□□□ 0.14
COA1-218ENST00000488813 EFCAB5A4FU69 1503 aa15.9■□□□□ 0.14
COA1-218ENST00000488813 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
COA1-218ENST00000488813 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
COA1-218ENST00000488813 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
COA1-218ENST00000488813 GRIN2AQ12879 1464 aa15.88■□□□□ 0.13
COA1-218ENST00000488813 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
COA1-218ENST00000488813 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
COA1-218ENST00000488813 FHOD3Q2V2M9 1422 aa15.86■□□□□ 0.13
COA1-218ENST00000488813 KIAA0586Q9BVV6 1533 aa15.85■□□□□ 0.13
COA1-218ENST00000488813 FBLN2P98095 1184 aa15.83■□□□□ 0.13
COA1-218ENST00000488813 KANK4Q5T7N3 995 aaPredicted RBP15.82■□□□□ 0.12
COA1-218ENST00000488813 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
COA1-218ENST00000488813 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
COA1-218ENST00000488813 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
COA1-218ENST00000488813 MAP3K1Q13233 1512 aa15.79■□□□□ 0.12
COA1-218ENST00000488813 UGGT2Q9NYU1 1516 aa15.79■□□□□ 0.12
COA1-218ENST00000488813 NUP160Q12769 1436 aa15.79■□□□□ 0.12
COA1-218ENST00000488813 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
COA1-218ENST00000488813 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
COA1-218ENST00000488813 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
COA1-218ENST00000488813 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
COA1-218ENST00000488813 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
COA1-218ENST00000488813 PCF11O94913 1555 aaKnown RBP15.71■□□□□ 0.11
COA1-218ENST00000488813 TIAM1Q13009 1591 aa15.71■□□□□ 0.11
COA1-218ENST00000488813 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
COA1-218ENST00000488813 HRCP23327 699 aa15.69■□□□□ 0.1
COA1-218ENST00000488813 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
COA1-218ENST00000488813 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
COA1-218ENST00000488813 CARMIL2Q6F5E8 1435 aa15.65■□□□□ 0.1
COA1-218ENST00000488813 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
COA1-218ENST00000488813 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
COA1-218ENST00000488813 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
COA1-218ENST00000488813 PRG4Q92954 1404 aaPredicted RBP15.58■□□□□ 0.08
COA1-218ENST00000488813 MTUS2Q5JR59 1369 aa15.58■□□□□ 0.08
COA1-218ENST00000488813 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
COA1-218ENST00000488813 PHLDB1Q86UU1 1377 aa15.57■□□□□ 0.08
COA1-218ENST00000488813 CCNB3Q8WWL7 1395 aa15.57■□□□□ 0.08
COA1-218ENST00000488813 EPRSP07814 1512 aaKnown RBP15.56■□□□□ 0.08
COA1-218ENST00000488813 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
COA1-218ENST00000488813 CHD1O14646 1710 aa15.55■□□□□ 0.08
COA1-218ENST00000488813 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.08
COA1-218ENST00000488813 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
COA1-218ENST00000488813 PTPRGP23470 1445 aa15.51■□□□□ 0.07
COA1-218ENST00000488813 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
COA1-218ENST00000488813 ARID3CA6NKF2 412 aa15.5■□□□□ 0.07
COA1-218ENST00000488813 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
COA1-218ENST00000488813 EHBP1L1Q8N3D4 1523 aa15.49■□□□□ 0.07
COA1-218ENST00000488813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
COA1-218ENST00000488813 CDK11AQ9UQ88 783 aaPredicted RBP15.49■□□□□ 0.07
COA1-218ENST00000488813 CDK13Q14004 1512 aaKnown RBP15.49■□□□□ 0.07
COA1-218ENST00000488813 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
COA1-218ENST00000488813 SHROOM2Q13796 1616 aa15.48■□□□□ 0.07
COA1-218ENST00000488813 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
COA1-218ENST00000488813 NCOA2Q15596 1464 aa15.48■□□□□ 0.07
COA1-218ENST00000488813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.48■□□□□ 0.07
COA1-218ENST00000488813 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
COA1-218ENST00000488813 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
COA1-218ENST00000488813 FAM50AQ14320 339 aaKnown RBP15.45■□□□□ 0.06
COA1-218ENST00000488813 ABCA8O94911 1581 aa15.45■□□□□ 0.06
COA1-218ENST00000488813 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
COA1-218ENST00000488813 FGD6Q6ZV73 1430 aa15.44■□□□□ 0.06
COA1-218ENST00000488813 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
COA1-218ENST00000488813 ITGAEP38570 1179 aa15.42■□□□□ 0.06
COA1-218ENST00000488813 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
COA1-218ENST00000488813 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
COA1-218ENST00000488813 ATP10BO94823 1461 aa15.41■□□□□ 0.06
COA1-218ENST00000488813 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
COA1-218ENST00000488813 UACAQ9BZF9 1416 aa15.4■□□□□ 0.06
COA1-218ENST00000488813 TROQ12816 1431 aaPredicted RBP15.4■□□□□ 0.06
COA1-218ENST00000488813 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
COA1-218ENST00000488813 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
COA1-218ENST00000488813 MIA2Q96PC5 1412 aa15.36■□□□□ 0.05
COA1-218ENST00000488813 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
COA1-218ENST00000488813 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
COA1-218ENST00000488813 SETD5Q9C0A6 1442 aa15.3■□□□□ 0.04
COA1-218ENST00000488813 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
COA1-218ENST00000488813 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
COA1-218ENST00000488813 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms