RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 JPH4Q96JJ6 628 aa21.54■■□□□ 1.04
PHF1-210ENST00000488767 SHROOM2Q13796 1616 aa21.54■■□□□ 1.04
PHF1-210ENST00000488767 EEA1Q15075 1411 aa21.54■■□□□ 1.04
PHF1-210ENST00000488767 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
PHF1-210ENST00000488767 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
PHF1-210ENST00000488767 CSRNP3Q8WYN3 585 aa21.47■■□□□ 1.03
PHF1-210ENST00000488767 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
PHF1-210ENST00000488767 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
PHF1-210ENST00000488767 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
PHF1-210ENST00000488767 CARMIL2Q6F5E8 1435 aa21.4■■□□□ 1.02
PHF1-210ENST00000488767 FAM9AQ8IZU1 332 aaPredicted RBP21.39■■□□□ 1.01
PHF1-210ENST00000488767 CTTNBP2Q8WZ74 1663 aa21.33■■□□□ 1
PHF1-210ENST00000488767 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
PHF1-210ENST00000488767 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
PHF1-210ENST00000488767 PTPRGP23470 1445 aa21.27■■□□□ 1
PHF1-210ENST00000488767 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
PHF1-210ENST00000488767 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
PHF1-210ENST00000488767 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
PHF1-210ENST00000488767 TRHP20396 242 aaPredicted RBP21.24■□□□□ 0.99
PHF1-210ENST00000488767 KIF21BO75037 1637 aa21.24■□□□□ 0.99
PHF1-210ENST00000488767 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
PHF1-210ENST00000488767 KIAA0556O60303 1618 aa21.2■□□□□ 0.98
PHF1-210ENST00000488767 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
PHF1-210ENST00000488767 ADCY10Q96PN6 1610 aa21.13■□□□□ 0.97
PHF1-210ENST00000488767 EHMT2Q96KQ7 1210 aa21.12■□□□□ 0.97
PHF1-210ENST00000488767 UACAQ9BZF9 1416 aa21.12■□□□□ 0.97
PHF1-210ENST00000488767 RANGAP1P46060 587 aaPredicted RBP21.09■□□□□ 0.97
PHF1-210ENST00000488767 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
PHF1-210ENST00000488767 ABCC2Q92887 1545 aa21.06■□□□□ 0.96
PHF1-210ENST00000488767 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
PHF1-210ENST00000488767 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
PHF1-210ENST00000488767 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
PHF1-210ENST00000488767 EFCAB5A4FU69 1503 aa21.02■□□□□ 0.96
PHF1-210ENST00000488767 PLB1Q6P1J6 1458 aa20.99■□□□□ 0.95
PHF1-210ENST00000488767 KDM5BQ9UGL1 1544 aa20.96■□□□□ 0.95
PHF1-210ENST00000488767 ABCA8O94911 1581 aa20.95■□□□□ 0.94
PHF1-210ENST00000488767 ABCC10Q5T3U5 1492 aa20.94■□□□□ 0.94
PHF1-210ENST00000488767 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
PHF1-210ENST00000488767 FHOD3Q2V2M9 1422 aa20.94■□□□□ 0.94
PHF1-210ENST00000488767 ASXL2Q76L83 1435 aa20.93■□□□□ 0.94
PHF1-210ENST00000488767 ZCCHC11Q5TAX3 1644 aaKnown RBP20.91■□□□□ 0.94
PHF1-210ENST00000488767 DIP2BQ9P265 1576 aa20.89■□□□□ 0.93
PHF1-210ENST00000488767 RAPGEF6Q8TEU7 1601 aa20.87■□□□□ 0.93
PHF1-210ENST00000488767 KIF13AQ9H1H9 1805 aa20.86■□□□□ 0.93
PHF1-210ENST00000488767 FMN1Q68DA7 1419 aa20.85■□□□□ 0.93
PHF1-210ENST00000488767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
PHF1-210ENST00000488767 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
PHF1-210ENST00000488767 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.93
PHF1-210ENST00000488767 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.93
PHF1-210ENST00000488767 ARID3CA6NKF2 412 aa20.83■□□□□ 0.93
PHF1-210ENST00000488767 GLI2P10070 1586 aa20.79■□□□□ 0.92
PHF1-210ENST00000488767 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
PHF1-210ENST00000488767 ATP10BO94823 1461 aa20.78■□□□□ 0.92
PHF1-210ENST00000488767 NUP153P49790 1475 aaKnown RBP20.77■□□□□ 0.92
PHF1-210ENST00000488767 CLIP1P30622 1438 aa20.77■□□□□ 0.91
PHF1-210ENST00000488767 KCNH8Q96L42 1107 aa20.76■□□□□ 0.91
PHF1-210ENST00000488767 ATP1B4Q9UN42 357 aaPredicted RBP20.76■□□□□ 0.91
PHF1-210ENST00000488767 HECW1Q76N89 1606 aa20.73■□□□□ 0.91
PHF1-210ENST00000488767 PLEKHD1A6NEE1 506 aa20.71■□□□□ 0.91
PHF1-210ENST00000488767 TSPOAP1O95153 1857 aa20.69■□□□□ 0.9
PHF1-210ENST00000488767 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
PHF1-210ENST00000488767 CDK11AQ9UQ88 783 aaPredicted RBP20.68■□□□□ 0.9
PHF1-210ENST00000488767 MAP3K4Q9Y6R4 1608 aa20.67■□□□□ 0.9
PHF1-210ENST00000488767 CEP162Q5TB80 1403 aa20.66■□□□□ 0.9
PHF1-210ENST00000488767 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
PHF1-210ENST00000488767 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.9
PHF1-210ENST00000488767 CASKIN1Q8WXD9 1431 aa20.63■□□□□ 0.89
PHF1-210ENST00000488767 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
PHF1-210ENST00000488767 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
PHF1-210ENST00000488767 FYCO1Q9BQS8 1478 aa20.61■□□□□ 0.89
PHF1-210ENST00000488767 KDM6BO15054 1643 aa20.6■□□□□ 0.89
PHF1-210ENST00000488767 CCDC18Q5T9S5 1454 aa20.6■□□□□ 0.89
PHF1-210ENST00000488767 PCF11O94913 1555 aaKnown RBP20.59■□□□□ 0.89
PHF1-210ENST00000488767 MAGI3Q5TCQ9 1506 aa20.59■□□□□ 0.89
PHF1-210ENST00000488767 ABCA9Q8IUA7 1624 aa20.57■□□□□ 0.88
PHF1-210ENST00000488767 PPRC1Q5VV67 1664 aaKnown RBP20.57■□□□□ 0.88
PHF1-210ENST00000488767 TROQ12816 1431 aaPredicted RBP20.51■□□□□ 0.87
PHF1-210ENST00000488767 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
PHF1-210ENST00000488767 KIF14Q15058 1648 aa20.49■□□□□ 0.87
PHF1-210ENST00000488767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.48■□□□□ 0.87
PHF1-210ENST00000488767 NEO1Q92859 1461 aa20.46■□□□□ 0.87
PHF1-210ENST00000488767 LRRIQ1Q96JM4 1722 aa20.45■□□□□ 0.86
PHF1-210ENST00000488767 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
PHF1-210ENST00000488767 CFAP74Q9C0B2 1584 aa20.44■□□□□ 0.86
PHF1-210ENST00000488767 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
PHF1-210ENST00000488767 FANCAO15360 1455 aa20.41■□□□□ 0.86
PHF1-210ENST00000488767 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
PHF1-210ENST00000488767 ARAP3Q8WWN8 1544 aa20.4■□□□□ 0.86
PHF1-210ENST00000488767 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
PHF1-210ENST00000488767 PLCH2O75038 1416 aa20.39■□□□□ 0.85
PHF1-210ENST00000488767 MYO5CQ9NQX4 1742 aa20.37■□□□□ 0.85
PHF1-210ENST00000488767 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
PHF1-210ENST00000488767 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
PHF1-210ENST00000488767 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
PHF1-210ENST00000488767 DENND4BO75064 1496 aaPredicted RBP20.32■□□□□ 0.84
PHF1-210ENST00000488767 APLP2Q06481 763 aa20.32■□□□□ 0.84
PHF1-210ENST00000488767 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
PHF1-210ENST00000488767 ADGRL1O94910 1474 aa20.3■□□□□ 0.84
PHF1-210ENST00000488767 RAPGEF3O95398 923 aa20.3■□□□□ 0.84
PHF1-210ENST00000488767 CCNB3Q8WWL7 1395 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms