RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PELP1Q8IZL8 1130 aaKnown RBP11.1□□□□□ -0.63
CD46-215ENST00000488596 C7P10643 843 aa11.09□□□□□ -0.63
CD46-215ENST00000488596 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
CD46-215ENST00000488596 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
CD46-215ENST00000488596 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
CD46-215ENST00000488596 ATMINO43313 823 aaPredicted RBP11.04□□□□□ -0.64
CD46-215ENST00000488596 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
CD46-215ENST00000488596 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
CD46-215ENST00000488596 SCUBE2Q9NQ36 999 aa10.96□□□□□ -0.65
CD46-215ENST00000488596 FKBP8Q14318 412 aa10.94□□□□□ -0.66
CD46-215ENST00000488596 MIER1Q8N108 512 aa10.94□□□□□ -0.66
CD46-215ENST00000488596 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
CD46-215ENST00000488596 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
CD46-215ENST00000488596 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
CD46-215ENST00000488596 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
CD46-215ENST00000488596 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
CD46-215ENST00000488596 KIF12Q96FN5 646 aa10.86□□□□□ -0.67
CD46-215ENST00000488596 FAM163AQ96GL9 167 aaPredicted RBP10.86□□□□□ -0.67
CD46-215ENST00000488596 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
CD46-215ENST00000488596 TIE1P35590 1138 aa10.82□□□□□ -0.68
CD46-215ENST00000488596 RASEFQ8IZ41 740 aa10.82□□□□□ -0.68
CD46-215ENST00000488596 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
CD46-215ENST00000488596 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
CD46-215ENST00000488596 MAP3K13O43283 966 aa10.75□□□□□ -0.69
CD46-215ENST00000488596 NUBP1P53384 320 aa10.74□□□□□ -0.69
CD46-215ENST00000488596 SEC24BO95487 1268 aa10.73□□□□□ -0.69
CD46-215ENST00000488596 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
CD46-215ENST00000488596 IER5LQ5T953 404 aa10.72□□□□□ -0.69
CD46-215ENST00000488596 TTLL13PA6NNM8 815 aa10.71□□□□□ -0.69
CD46-215ENST00000488596 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
CD46-215ENST00000488596 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
CD46-215ENST00000488596 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
CD46-215ENST00000488596 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
CD46-215ENST00000488596 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
CD46-215ENST00000488596 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
CD46-215ENST00000488596 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
CD46-215ENST00000488596 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
CD46-215ENST00000488596 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
CD46-215ENST00000488596 ST18O60284 1047 aa10.57□□□□□ -0.72
CD46-215ENST00000488596 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
CD46-215ENST00000488596 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
CD46-215ENST00000488596 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
CD46-215ENST00000488596 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CD46-215ENST00000488596 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
CD46-215ENST00000488596 PYGBP11216 843 aa10.52□□□□□ -0.73
CD46-215ENST00000488596 KLHL34Q8N239 644 aa10.51□□□□□ -0.73
CD46-215ENST00000488596 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
CD46-215ENST00000488596 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
CD46-215ENST00000488596 SNPHO15079 494 aa10.47□□□□□ -0.73
CD46-215ENST00000488596 MMRN1Q13201 1228 aa10.45□□□□□ -0.74
CD46-215ENST00000488596 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
CD46-215ENST00000488596 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
CD46-215ENST00000488596 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
CD46-215ENST00000488596 IFNLR1Q8IU57 520 aaPredicted RBP10.42□□□□□ -0.74
CD46-215ENST00000488596 GSE1Q14687 1217 aa10.41□□□□□ -0.74
CD46-215ENST00000488596 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
CD46-215ENST00000488596 CHRM1P11229 460 aaPredicted RBP10.34□□□□□ -0.75
CD46-215ENST00000488596 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
CD46-215ENST00000488596 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
CD46-215ENST00000488596 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
CD46-215ENST00000488596 CIZ1Q9ULV3 898 aaPredicted RBP10.29□□□□□ -0.76
CD46-215ENST00000488596 PSEN1P49768 467 aa10.26□□□□□ -0.77
CD46-215ENST00000488596 C3orf67Q6ZVT6 689 aa10.26□□□□□ -0.77
CD46-215ENST00000488596 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
CD46-215ENST00000488596 EMP3P54852 163 aa10.24□□□□□ -0.77
CD46-215ENST00000488596 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
CD46-215ENST00000488596 GOLGA2Q08379 1002 aa10.2□□□□□ -0.78
CD46-215ENST00000488596 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
CD46-215ENST00000488596 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
CD46-215ENST00000488596 HS3ST6Q96QI5 342 aa10.19□□□□□ -0.78
CD46-215ENST00000488596 KRTAP3-3Q9BYR6 98 aa10.18□□□□□ -0.78
CD46-215ENST00000488596 KRTAP3-2Q9BYR7 98 aa10.18□□□□□ -0.78
CD46-215ENST00000488596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.782e-11■□□□□ 11.2
CD46-215ENST00000488596 FAM205CA6NFA0 338 aa10.14□□□□□ -0.79
CD46-215ENST00000488596 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
CD46-215ENST00000488596 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
CD46-215ENST00000488596 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
CD46-215ENST00000488596 ILDR1Q86SU0 546 aaPredicted RBP10.12□□□□□ -0.79
CD46-215ENST00000488596 DPY19L2Q6NUT2 758 aa10.11□□□□□ -0.79
CD46-215ENST00000488596 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
CD46-215ENST00000488596 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
CD46-215ENST00000488596 G3V3G9 751 aa10.03□□□□□ -0.8
CD46-215ENST00000488596 HOXB3P14651 431 aaPredicted RBP10.03□□□□□ -0.8
CD46-215ENST00000488596 EFCAB3Q8N7B9 438 aa10.03□□□□□ -0.8
CD46-215ENST00000488596 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.81
CD46-215ENST00000488596 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
CD46-215ENST00000488596 BOLA1Q9Y3E2 137 aa10.01□□□□□ -0.81
CD46-215ENST00000488596 DOK7Q18PE1 504 aa10□□□□□ -0.81
CD46-215ENST00000488596 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
CD46-215ENST00000488596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.98□□□□□ -0.81
CD46-215ENST00000488596 ZFP91Q96JP5 570 aaPredicted RBP9.98□□□□□ -0.81
CD46-215ENST00000488596 ERBB3P21860 1342 aa9.97□□□□□ -0.81
CD46-215ENST00000488596 RNF166Q96A37 237 aaPredicted RBP9.96□□□□□ -0.82
CD46-215ENST00000488596 RIMBP2O15034 1052 aa9.95□□□□□ -0.82
CD46-215ENST00000488596 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
CD46-215ENST00000488596 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
CD46-215ENST00000488596 SOX12O15370 315 aa9.9□□□□□ -0.82
CD46-215ENST00000488596 ZSWIM6Q9HCJ5 1215 aa9.9□□□□□ -0.82
CD46-215ENST00000488596 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
CD46-215ENST00000488596 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms