RNA–Protein interactions for RNA: ENST00000488411.1

ZC3H11A-210, Transcript of zinc finger CCCH-type containing 11A, humanhuman

TSL 2

Gene ZC3H11A, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H11A-210ENST00000488411 SLC39A7Q92504 469 aa14.19□□□□□ -0.14
ZC3H11A-210ENST00000488411 C7P10643 843 aa14.18□□□□□ -0.14
ZC3H11A-210ENST00000488411 METRNQ9UJH8 293 aa14.18□□□□□ -0.14
ZC3H11A-210ENST00000488411 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
ZC3H11A-210ENST00000488411 PLSCR2Q9NRY7 297 aa14.17□□□□□ -0.14
ZC3H11A-210ENST00000488411 CCDC61Q9Y6R9 512 aa14.16□□□□□ -0.14
ZC3H11A-210ENST00000488411 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
ZC3H11A-210ENST00000488411 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
ZC3H11A-210ENST00000488411 POTEMA6NI47 508 aa14.07□□□□□ -0.16
ZC3H11A-210ENST00000488411 ATN1P54259 1190 aaPredicted RBP14.06□□□□□ -0.16
ZC3H11A-210ENST00000488411 MAMSTRQ6ZN01 415 aa14.06□□□□□ -0.16
ZC3H11A-210ENST00000488411 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
ZC3H11A-210ENST00000488411 MIER1Q8N108 512 aa14.03□□□□□ -0.16
ZC3H11A-210ENST00000488411 POTEGQ6S5H5 508 aa14.02□□□□□ -0.17
ZC3H11A-210ENST00000488411 BMP2KQ9NSY1 1161 aaPredicted RBP13.99□□□□□ -0.17
ZC3H11A-210ENST00000488411 MAP3K13O43283 966 aa13.98□□□□□ -0.17
ZC3H11A-210ENST00000488411 RASEFQ8IZ41 740 aa13.98□□□□□ -0.17
ZC3H11A-210ENST00000488411 TIE1P35590 1138 aa13.96□□□□□ -0.17
ZC3H11A-210ENST00000488411 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
ZC3H11A-210ENST00000488411 SCUBE2Q9NQ36 999 aa13.94□□□□□ -0.18
ZC3H11A-210ENST00000488411 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
ZC3H11A-210ENST00000488411 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
ZC3H11A-210ENST00000488411 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
ZC3H11A-210ENST00000488411 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
ZC3H11A-210ENST00000488411 TTLL13PA6NNM8 815 aa13.85□□□□□ -0.19
ZC3H11A-210ENST00000488411 LCE2DQ5TA82 110 aaPredicted RBP13.85□□□□□ -0.19
ZC3H11A-210ENST00000488411 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
ZC3H11A-210ENST00000488411 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
ZC3H11A-210ENST00000488411 COLQQ9Y215 455 aaPredicted RBP13.81□□□□□ -0.2
ZC3H11A-210ENST00000488411 NUBP1P53384 320 aa13.8□□□□□ -0.2
ZC3H11A-210ENST00000488411 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
ZC3H11A-210ENST00000488411 SEC24BO95487 1268 aa13.79□□□□□ -0.2
ZC3H11A-210ENST00000488411 IER5LQ5T953 404 aa13.79□□□□□ -0.2
ZC3H11A-210ENST00000488411 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
ZC3H11A-210ENST00000488411 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
ZC3H11A-210ENST00000488411 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
ZC3H11A-210ENST00000488411 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
ZC3H11A-210ENST00000488411 FKBP8Q14318 412 aa13.61□□□□□ -0.23
ZC3H11A-210ENST00000488411 PLCG2P16885 1265 aa13.58□□□□□ -0.24
ZC3H11A-210ENST00000488411 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
ZC3H11A-210ENST00000488411 SLAIN1Q8ND83 568 aa13.57□□□□□ -0.24
ZC3H11A-210ENST00000488411 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
ZC3H11A-210ENST00000488411 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
ZC3H11A-210ENST00000488411 ST18O60284 1047 aa13.5□□□□□ -0.25
ZC3H11A-210ENST00000488411 OCEL1Q9H607 264 aa13.5□□□□□ -0.25
ZC3H11A-210ENST00000488411 PYGBP11216 843 aa13.49□□□□□ -0.25
ZC3H11A-210ENST00000488411 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
ZC3H11A-210ENST00000488411 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
ZC3H11A-210ENST00000488411 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
ZC3H11A-210ENST00000488411 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
ZC3H11A-210ENST00000488411 SNPHO15079 494 aa13.37□□□□□ -0.27
ZC3H11A-210ENST00000488411 GSE1Q14687 1217 aa13.36□□□□□ -0.27
ZC3H11A-210ENST00000488411 ZNF467Q7Z7K2 595 aaPredicted RBP13.34□□□□□ -0.27
ZC3H11A-210ENST00000488411 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
ZC3H11A-210ENST00000488411 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
ZC3H11A-210ENST00000488411 PDCD7Q8N8D1 485 aaKnown RBP13.31□□□□□ -0.28
ZC3H11A-210ENST00000488411 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
ZC3H11A-210ENST00000488411 ABCC9O60706 1549 aa13.29□□□□□ -0.28
ZC3H11A-210ENST00000488411 MKRN3Q13064 507 aaKnown RBP13.28□□□□□ -0.28
ZC3H11A-210ENST00000488411 GOLGA2Q08379 1002 aa13.27□□□□□ -0.29
ZC3H11A-210ENST00000488411 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
ZC3H11A-210ENST00000488411 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
ZC3H11A-210ENST00000488411 PSEN1P49768 467 aa13.22□□□□□ -0.29
ZC3H11A-210ENST00000488411 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
ZC3H11A-210ENST00000488411 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
ZC3H11A-210ENST00000488411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.296e-9■□□□□ 10
ZC3H11A-210ENST00000488411 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
ZC3H11A-210ENST00000488411 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
ZC3H11A-210ENST00000488411 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
ZC3H11A-210ENST00000488411 PDAP1Q13442 181 aaKnown RBP13.14□□□□□ -0.31
ZC3H11A-210ENST00000488411 EMP3P54852 163 aa13.12□□□□□ -0.31
ZC3H11A-210ENST00000488411 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
ZC3H11A-210ENST00000488411 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
ZC3H11A-210ENST00000488411 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
ZC3H11A-210ENST00000488411 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
ZC3H11A-210ENST00000488411 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
ZC3H11A-210ENST00000488411 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
ZC3H11A-210ENST00000488411 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
ZC3H11A-210ENST00000488411 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
ZC3H11A-210ENST00000488411 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
ZC3H11A-210ENST00000488411 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
ZC3H11A-210ENST00000488411 G3V3G9 751 aa13.01□□□□□ -0.33
ZC3H11A-210ENST00000488411 KRTAP3-3Q9BYR6 98 aa13.01□□□□□ -0.33
ZC3H11A-210ENST00000488411 KRTAP3-2Q9BYR7 98 aa13.01□□□□□ -0.33
ZC3H11A-210ENST00000488411 HOXB3P14651 431 aaPredicted RBP12.96□□□□□ -0.33
ZC3H11A-210ENST00000488411 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
ZC3H11A-210ENST00000488411 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
ZC3H11A-210ENST00000488411 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
ZC3H11A-210ENST00000488411 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
ZC3H11A-210ENST00000488411 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
ZC3H11A-210ENST00000488411 ERBB3P21860 1342 aa12.82□□□□□ -0.36
ZC3H11A-210ENST00000488411 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
ZC3H11A-210ENST00000488411 MICALL2Q8IY33 904 aa12.77□□□□□ -0.37
ZC3H11A-210ENST00000488411 SOX12O15370 315 aa12.76□□□□□ -0.37
ZC3H11A-210ENST00000488411 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
ZC3H11A-210ENST00000488411 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
ZC3H11A-210ENST00000488411 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
ZC3H11A-210ENST00000488411 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
ZC3H11A-210ENST00000488411 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
ZC3H11A-210ENST00000488411 MS4A4AQ96JQ5 239 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms