RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ARHGAP35Q9NRY4 1499 aa20.72■□□□□ 0.91
RER1-207ENST00000488353 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
RER1-207ENST00000488353 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
RER1-207ENST00000488353 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
RER1-207ENST00000488353 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
RER1-207ENST00000488353 TSHZ2Q9NRE2 1034 aa20.64■□□□□ 0.89
RER1-207ENST00000488353 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
RER1-207ENST00000488353 BCL11AQ9H165 835 aa20.59■□□□□ 0.89
RER1-207ENST00000488353 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
RER1-207ENST00000488353 WDR97A6NE52 1622 aa20.55■□□□□ 0.88
RER1-207ENST00000488353 CUL7Q14999 1698 aa20.5■□□□□ 0.87
RER1-207ENST00000488353 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
RER1-207ENST00000488353 GAPVD1Q14C86 1478 aa20.49■□□□□ 0.87
RER1-207ENST00000488353 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
RER1-207ENST00000488353 ITGAEP38570 1179 aa20.46■□□□□ 0.87
RER1-207ENST00000488353 FHOD3Q2V2M9 1422 aa20.45■□□□□ 0.86
RER1-207ENST00000488353 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
RER1-207ENST00000488353 TARBP1Q13395 1621 aaKnown RBP20.42■□□□□ 0.86
RER1-207ENST00000488353 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
RER1-207ENST00000488353 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
RER1-207ENST00000488353 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
RER1-207ENST00000488353 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
RER1-207ENST00000488353 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
RER1-207ENST00000488353 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
RER1-207ENST00000488353 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■□□ 15.2
RER1-207ENST00000488353 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
RER1-207ENST00000488353 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
RER1-207ENST00000488353 LRRC9Q6ZRR7 1453 aa20.32■□□□□ 0.84
RER1-207ENST00000488353 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
RER1-207ENST00000488353 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
RER1-207ENST00000488353 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
RER1-207ENST00000488353 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
RER1-207ENST00000488353 CASKIN1Q8WXD9 1431 aa20.26■□□□□ 0.83
RER1-207ENST00000488353 CFAP43Q8NDM7 1665 aa20.26■□□□□ 0.83
RER1-207ENST00000488353 FYCO1Q9BQS8 1478 aa20.26■□□□□ 0.83
RER1-207ENST00000488353 WDR62O43379 1518 aa20.23■□□□□ 0.83
RER1-207ENST00000488353 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
RER1-207ENST00000488353 FMN1Q68DA7 1419 aa20.23■□□□□ 0.83
RER1-207ENST00000488353 RAB3GAP2Q9H2M9 1393 aa20.22■□□□□ 0.83
RER1-207ENST00000488353 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
RER1-207ENST00000488353 GRIN2BQ13224 1484 aa20.2■□□□□ 0.82
RER1-207ENST00000488353 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
RER1-207ENST00000488353 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
RER1-207ENST00000488353 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
RER1-207ENST00000488353 BCANQ96GW7 911 aa20.19■□□□□ 0.82
RER1-207ENST00000488353 FKBP8Q14318 412 aa20.18■□□□□ 0.82
RER1-207ENST00000488353 FAM50AQ14320 339 aaKnown RBP20.18■□□□□ 0.82
RER1-207ENST00000488353 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
RER1-207ENST00000488353 KCNH8Q96L42 1107 aa20.13■□□□□ 0.81
RER1-207ENST00000488353 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
RER1-207ENST00000488353 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
RER1-207ENST00000488353 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
RER1-207ENST00000488353 LRRIQ1Q96JM4 1722 aa20.11■□□□□ 0.81
RER1-207ENST00000488353 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
RER1-207ENST00000488353 NEFLP07196 543 aa20.1■□□□□ 0.81
RER1-207ENST00000488353 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
RER1-207ENST00000488353 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
RER1-207ENST00000488353 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
RER1-207ENST00000488353 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
RER1-207ENST00000488353 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
RER1-207ENST00000488353 GRIN2AQ12879 1464 aa20■□□□□ 0.79
RER1-207ENST00000488353 FBLN2P98095 1184 aa19.99■□□□□ 0.79
RER1-207ENST00000488353 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
RER1-207ENST00000488353 MAGI3Q5TCQ9 1506 aa19.98■□□□□ 0.79
RER1-207ENST00000488353 UGGT2Q9NYU1 1516 aa19.97■□□□□ 0.79
RER1-207ENST00000488353 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
RER1-207ENST00000488353 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
RER1-207ENST00000488353 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
RER1-207ENST00000488353 HIRIP3Q9BW71 556 aaPredicted RBP19.95■□□□□ 0.78
RER1-207ENST00000488353 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
RER1-207ENST00000488353 MSH5O43196 834 aa19.94■□□□□ 0.78
RER1-207ENST00000488353 CDK13Q14004 1512 aaKnown RBP19.94■□□□□ 0.78
RER1-207ENST00000488353 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
RER1-207ENST00000488353 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
RER1-207ENST00000488353 EPRSP07814 1512 aaKnown RBP19.93■□□□□ 0.78
RER1-207ENST00000488353 DISP1Q96F81 1524 aa19.93■□□□□ 0.78
RER1-207ENST00000488353 SUPT6HQ7KZ85 1726 aaKnown RBP19.93■□□□□ 0.78
RER1-207ENST00000488353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.786e-7■■■□□ 19.2
RER1-207ENST00000488353 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
RER1-207ENST00000488353 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
RER1-207ENST00000488353 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
RER1-207ENST00000488353 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
RER1-207ENST00000488353 KIAA0556O60303 1618 aa19.9■□□□□ 0.78
RER1-207ENST00000488353 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
RER1-207ENST00000488353 PTPRKQ15262 1439 aa19.89■□□□□ 0.78
RER1-207ENST00000488353 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
RER1-207ENST00000488353 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
RER1-207ENST00000488353 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
RER1-207ENST00000488353 TRIM52Q96A61 297 aa19.84■□□□□ 0.77
RER1-207ENST00000488353 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
RER1-207ENST00000488353 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
RER1-207ENST00000488353 PTPN23Q9H3S7 1636 aa19.83■□□□□ 0.76
RER1-207ENST00000488353 ANP32CO43423 234 aa19.81■□□□□ 0.76
RER1-207ENST00000488353 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
RER1-207ENST00000488353 NUP153P49790 1475 aaKnown RBP19.8■□□□□ 0.76
RER1-207ENST00000488353 CDK11AQ9UQ88 783 aaPredicted RBP19.79■□□□□ 0.76
RER1-207ENST00000488353 JPH4Q96JJ6 628 aa19.78■□□□□ 0.76
RER1-207ENST00000488353 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
RER1-207ENST00000488353 HFM1A2PYH4 1435 aa19.77■□□□□ 0.76
RER1-207ENST00000488353 NUP160Q12769 1436 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms