RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
PKD1-221ENST00000488185 KIAA0586Q9BVV6 1533 aa34.99■■■■□ 3.19
PKD1-221ENST00000488185 PRG4Q92954 1404 aaPredicted RBP34.96■■■■□ 3.19
PKD1-221ENST00000488185 RAPGEF2Q9Y4G8 1499 aa34.79■■■■□ 3.16
PKD1-221ENST00000488185 TRHP20396 242 aaPredicted RBP34.73■■■■□ 3.15
PKD1-221ENST00000488185 IQGAP2Q13576 1575 aa34.66■■■■□ 3.14
PKD1-221ENST00000488185 PRXQ9BXM0 1461 aa34.63■■■■□ 3.13
PKD1-221ENST00000488185 CARMIL2Q6F5E8 1435 aa34.6■■■■□ 3.13
PKD1-221ENST00000488185 UGGT2Q9NYU1 1516 aa34.53■■■■□ 3.12
PKD1-221ENST00000488185 TNIKQ9UKE5 1360 aa34.52■■■■□ 3.12
PKD1-221ENST00000488185 PTPRGP23470 1445 aa34.52■■■■□ 3.12
PKD1-221ENST00000488185 EEA1Q15075 1411 aa34.5■■■■□ 3.11
PKD1-221ENST00000488185 DISP1Q96F81 1524 aa34.49■■■■□ 3.11
PKD1-221ENST00000488185 CSRNP3Q8WYN3 585 aa34.48■■■■□ 3.11
PKD1-221ENST00000488185 ADCY10Q96PN6 1610 aa34.44■■■■□ 3.1
PKD1-221ENST00000488185 NPM1P06748 294 aaKnown RBP eCLIP34.43■■■■□ 3.1
PKD1-221ENST00000488185 MAPKBP1O60336 1514 aa34.4■■■■□ 3.1
PKD1-221ENST00000488185 CTTNBP2Q8WZ74 1663 aa34.36■■■■□ 3.09
PKD1-221ENST00000488185 UHRF1BP1LA0JNW5 1464 aa34.33■■■■□ 3.09
PKD1-221ENST00000488185 KIAA0556O60303 1618 aa34.32■■■■□ 3.08
PKD1-221ENST00000488185 CHIC1Q5VXU3 224 aa34.31■■■■□ 3.08
PKD1-221ENST00000488185 GOLGA3Q08378 1498 aa34.3■■■■□ 3.08
PKD1-221ENST00000488185 UACAQ9BZF9 1416 aa34.29■■■■□ 3.08
PKD1-221ENST00000488185 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
PKD1-221ENST00000488185 ABCC2Q92887 1545 aa34.27■■■■□ 3.08
PKD1-221ENST00000488185 TTBK1Q5TCY1 1321 aaPredicted RBP34.2■■■■□ 3.07
PKD1-221ENST00000488185 KIF13AQ9H1H9 1805 aa34.2■■■■□ 3.07
PKD1-221ENST00000488185 FAM69CQ0P6D2 419 aa34.15■■■■□ 3.06
PKD1-221ENST00000488185 KDM5BQ9UGL1 1544 aa34.14■■■■□ 3.06
PKD1-221ENST00000488185 DIP2BQ9P265 1576 aa34.14■■■■□ 3.06
PKD1-221ENST00000488185 PLB1Q6P1J6 1458 aa34.09■■■■□ 3.05
PKD1-221ENST00000488185 KIF21BO75037 1637 aa34.08■■■■□ 3.05
PKD1-221ENST00000488185 FAM9AQ8IZU1 332 aaPredicted RBP34.07■■■■□ 3.04
PKD1-221ENST00000488185 ASXL2Q76L83 1435 aa34.05■■■■□ 3.04
PKD1-221ENST00000488185 ABCA8O94911 1581 aa34.02■■■■□ 3.04
PKD1-221ENST00000488185 SAMD9Q5K651 1589 aa34.01■■■■□ 3.03
PKD1-221ENST00000488185 GLI2P10070 1586 aa33.97■■■■□ 3.03
PKD1-221ENST00000488185 ZCCHC11Q5TAX3 1644 aaKnown RBP33.94■■■■□ 3.02
PKD1-221ENST00000488185 P3H3Q8IVL6 736 aa33.88■■■■□ 3.01
PKD1-221ENST00000488185 EPRSP07814 1512 aaKnown RBP33.87■■■■□ 3.01
PKD1-221ENST00000488185 WDR7Q9Y4E6 1490 aa33.83■■■■□ 3.01
PKD1-221ENST00000488185 EFCAB5A4FU69 1503 aa33.81■■■■□ 3
PKD1-221ENST00000488185 ATP10BO94823 1461 aa33.76■■■□□ 2.99
PKD1-221ENST00000488185 UBTFP17480 764 aaKnown RBP33.74■■■□□ 2.99
PKD1-221ENST00000488185 MAP3K4Q9Y6R4 1608 aa33.72■■■□□ 2.99
PKD1-221ENST00000488185 FHOD3Q2V2M9 1422 aa33.71■■■□□ 2.99
PKD1-221ENST00000488185 RAPGEF6Q8TEU7 1601 aa33.7■■■□□ 2.99
PKD1-221ENST00000488185 PPRC1Q5VV67 1664 aaKnown RBP33.69■■■□□ 2.98
PKD1-221ENST00000488185 TSPOAP1O95153 1857 aa33.69■■■□□ 2.98
PKD1-221ENST00000488185 RANGAP1P46060 587 aaPredicted RBP33.68■■■□□ 2.98
PKD1-221ENST00000488185 KDM6BO15054 1643 aa33.64■■■□□ 2.98
PKD1-221ENST00000488185 NUP153P49790 1475 aaKnown RBP33.64■■■□□ 2.98
PKD1-221ENST00000488185 TEX14Q8IWB6 1497 aa33.63■■■□□ 2.97
PKD1-221ENST00000488185 KCNH8Q96L42 1107 aa33.58■■■□□ 2.97
PKD1-221ENST00000488185 MAGI3Q5TCQ9 1506 aa33.58■■■□□ 2.97
PKD1-221ENST00000488185 CD109Q6YHK3 1445 aa33.56■■■□□ 2.96
PKD1-221ENST00000488185 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
PKD1-221ENST00000488185 CFAP43Q8NDM7 1665 aa33.55■■■□□ 2.96
PKD1-221ENST00000488185 ARID3CA6NKF2 412 aa33.54■■■□□ 2.96
PKD1-221ENST00000488185 EHMT2Q96KQ7 1210 aa33.54■■■□□ 2.96
PKD1-221ENST00000488185 FMN1Q68DA7 1419 aa33.52■■■□□ 2.96
PKD1-221ENST00000488185 COL17A1Q9UMD9 1497 aaPredicted RBP33.48■■■□□ 2.95
PKD1-221ENST00000488185 ABCA9Q8IUA7 1624 aa33.44■■■□□ 2.94
PKD1-221ENST00000488185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
PKD1-221ENST00000488185 HNRNPUL2Q1KMD3 747 aaKnown RBP33.44■■■□□ 2.94
PKD1-221ENST00000488185 PLEKHD1A6NEE1 506 aa33.42■■■□□ 2.94
PKD1-221ENST00000488185 PHLDB1Q86UU1 1377 aa33.37■■■□□ 2.93
PKD1-221ENST00000488185 ARAP3Q8WWN8 1544 aa33.31■■■□□ 2.92
PKD1-221ENST00000488185 HECW1Q76N89 1606 aa33.31■■■□□ 2.92
PKD1-221ENST00000488185 NEO1Q92859 1461 aa33.27■■■□□ 2.92
PKD1-221ENST00000488185 CDK13Q14004 1512 aaKnown RBP33.27■■■□□ 2.92
PKD1-221ENST00000488185 AEBP2Q6ZN18 517 aaPredicted RBP33.25■■■□□ 2.91
PKD1-221ENST00000488185 CDK11AQ9UQ88 783 aaPredicted RBP33.23■■■□□ 2.91
PKD1-221ENST00000488185 CLIP1P30622 1438 aa33.21■■■□□ 2.91
PKD1-221ENST00000488185 CASKIN1Q8WXD9 1431 aa33.21■■■□□ 2.91
PKD1-221ENST00000488185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.2■■■□□ 2.91
PKD1-221ENST00000488185 ATP1B4Q9UN42 357 aaPredicted RBP33.17■■■□□ 2.9
PKD1-221ENST00000488185 KDM4FA0A1W2PPD8 638 aa33.13■■■□□ 2.89
PKD1-221ENST00000488185 TROQ12816 1431 aaPredicted RBP33.11■■■□□ 2.89
PKD1-221ENST00000488185 CCDC18Q5T9S5 1454 aa33.1■■■□□ 2.89
PKD1-221ENST00000488185 TTC37Q6PGP7 1564 aa33.09■■■□□ 2.89
PKD1-221ENST00000488185 FYCO1Q9BQS8 1478 aa33.09■■■□□ 2.89
PKD1-221ENST00000488185 PLCH2O75038 1416 aa33.08■■■□□ 2.89
PKD1-221ENST00000488185 PCF11O94913 1555 aaKnown RBP33.08■■■□□ 2.89
PKD1-221ENST00000488185 FANCAO15360 1455 aa33.06■■■□□ 2.88
PKD1-221ENST00000488185 LRRIQ1Q96JM4 1722 aa33.05■■■□□ 2.88
PKD1-221ENST00000488185 AKNAQ7Z591 1439 aa33.04■■■□□ 2.88
PKD1-221ENST00000488185 CFAP74Q9C0B2 1584 aa33.04■■■□□ 2.88
PKD1-221ENST00000488185 RAPGEF3O95398 923 aa33.01■■■□□ 2.87
PKD1-221ENST00000488185 KIF14Q15058 1648 aa32.99■■■□□ 2.87
PKD1-221ENST00000488185 DENND4BO75064 1496 aaPredicted RBP32.98■■■□□ 2.87
PKD1-221ENST00000488185 CEP162Q5TB80 1403 aa32.96■■■□□ 2.87
PKD1-221ENST00000488185 ADGRL1O94910 1474 aa32.96■■■□□ 2.87
PKD1-221ENST00000488185 FRMPD1Q5SYB0 1578 aa32.96■■■□□ 2.87
PKD1-221ENST00000488185 EFCAB2Q5VUJ9 269 aa32.93■■■□□ 2.86
PKD1-221ENST00000488185 MYO5CQ9NQX4 1742 aa32.88■■■□□ 2.85
PKD1-221ENST00000488185 RICTORQ6R327 1708 aa32.88■■■□□ 2.85
PKD1-221ENST00000488185 ZMYM4Q5VZL5 1548 aa32.85■■■□□ 2.85
PKD1-221ENST00000488185 SCAPERQ9BY12 1400 aa32.84■■■□□ 2.85
PKD1-221ENST00000488185 MAGI2Q86UL8 1455 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms