RNA–Protein interactions for RNA: ENST00000488153.5

SMYD3-213, Transcript of SET and MYND domain containing 3, humanhuman

TSL 3

Gene SMYD3, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-213ENST00000488153 LMTK3Q96Q04 1460 aa9.79□□□□□ -0.84
SMYD3-213ENST00000488153 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
SMYD3-213ENST00000488153 SOCS7O14512 581 aa9.76□□□□□ -0.85
SMYD3-213ENST00000488153 TOP2AP11388 1531 aaKnown RBP9.73□□□□□ -0.85
SMYD3-213ENST00000488153 SPDYE4A6NLX3 237 aa9.73□□□□□ -0.85
SMYD3-213ENST00000488153 PITPNM1O00562 1244 aa9.73□□□□□ -0.85
SMYD3-213ENST00000488153 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
SMYD3-213ENST00000488153 SUPT5HO00267 1087 aaKnown RBP9.69□□□□□ -0.86
SMYD3-213ENST00000488153 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
SMYD3-213ENST00000488153 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
SMYD3-213ENST00000488153 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
SMYD3-213ENST00000488153 CCDC88BA6NC98 1476 aa9.64□□□□□ -0.87
SMYD3-213ENST00000488153 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
SMYD3-213ENST00000488153 LAMC3Q9Y6N6 1575 aa9.63□□□□□ -0.87
SMYD3-213ENST00000488153 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
SMYD3-213ENST00000488153 PROM2Q8N271 834 aa9.61□□□□□ -0.87
SMYD3-213ENST00000488153 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
SMYD3-213ENST00000488153 WDR62O43379 1518 aa9.61□□□□□ -0.87
SMYD3-213ENST00000488153 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
SMYD3-213ENST00000488153 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
SMYD3-213ENST00000488153 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
SMYD3-213ENST00000488153 FKBP8Q14318 412 aa9.58□□□□□ -0.88
SMYD3-213ENST00000488153 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
SMYD3-213ENST00000488153 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMYD3-213ENST00000488153 ILDR2Q71H61 639 aa9.57□□□□□ -0.88
SMYD3-213ENST00000488153 CFTRP13569 1480 aa9.56□□□□□ -0.88
SMYD3-213ENST00000488153 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
SMYD3-213ENST00000488153 KDM4FA0A1W2PPD8 638 aa9.51□□□□□ -0.89
SMYD3-213ENST00000488153 CEP164Q9UPV0 1460 aa9.51□□□□□ -0.89
SMYD3-213ENST00000488153 PRDM2Q13029 1718 aa9.48□□□□□ -0.89
SMYD3-213ENST00000488153 HECW2Q9P2P5 1572 aa9.48□□□□□ -0.89
SMYD3-213ENST00000488153 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
SMYD3-213ENST00000488153 PRR29P0C7W0 189 aa9.47□□□□□ -0.89
SMYD3-213ENST00000488153 PRKAR2AP13861 404 aaKnown RBP9.45□□□□□ -0.9
SMYD3-213ENST00000488153 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
SMYD3-213ENST00000488153 URB2Q14146 1524 aaKnown RBP9.44□□□□□ -0.9
SMYD3-213ENST00000488153 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
SMYD3-213ENST00000488153 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
SMYD3-213ENST00000488153 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
SMYD3-213ENST00000488153 DNMBPQ6XZF7 1577 aa9.37□□□□□ -0.91
SMYD3-213ENST00000488153 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
SMYD3-213ENST00000488153 CUX1P39880 1505 aa9.33□□□□□ -0.92
SMYD3-213ENST00000488153 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
SMYD3-213ENST00000488153 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
SMYD3-213ENST00000488153 SPATA31D1Q6ZQQ2 1576 aa9.31□□□□□ -0.92
SMYD3-213ENST00000488153 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
SMYD3-213ENST00000488153 IFT140Q96RY7 1462 aa9.3□□□□□ -0.92
SMYD3-213ENST00000488153 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
SMYD3-213ENST00000488153 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
SMYD3-213ENST00000488153 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
SMYD3-213ENST00000488153 CHD1O14646 1710 aa9.29□□□□□ -0.92
SMYD3-213ENST00000488153 EVX2Q03828 476 aa9.29□□□□□ -0.92
SMYD3-213ENST00000488153 ZNF608Q9ULD9 1512 aaPredicted RBP9.29□□□□□ -0.92
SMYD3-213ENST00000488153 SOGA1O94964 1423 aa9.28□□□□□ -0.92
SMYD3-213ENST00000488153 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.925e-6■■■■■ 29.2
SMYD3-213ENST00000488153 SYNJ1O43426 1573 aa9.27□□□□□ -0.93
SMYD3-213ENST00000488153 TARBP1Q13395 1621 aaKnown RBP9.27□□□□□ -0.93
SMYD3-213ENST00000488153 C19orf67A6NJJ6 358 aa9.25□□□□□ -0.93
SMYD3-213ENST00000488153 HAX1O00165 279 aa9.25□□□□□ -0.93
SMYD3-213ENST00000488153 TOP2BQ02880 1626 aa9.24□□□□□ -0.93
SMYD3-213ENST00000488153 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
SMYD3-213ENST00000488153 AQRO60306 1485 aaKnown RBP eCLIP9.24□□□□□ -0.931e-6■■■■□ 20.6
SMYD3-213ENST00000488153 ADGRL1O94910 1474 aa9.24□□□□□ -0.93
SMYD3-213ENST00000488153 EIF4G3O43432 1585 aaKnown RBP9.24□□□□□ -0.93
SMYD3-213ENST00000488153 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
SMYD3-213ENST00000488153 KIF13AQ9H1H9 1805 aa9.22□□□□□ -0.93
SMYD3-213ENST00000488153 KDM6BO15054 1643 aa9.21□□□□□ -0.93
SMYD3-213ENST00000488153 MIER1Q8N108 512 aa9.2□□□□□ -0.94
SMYD3-213ENST00000488153 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
SMYD3-213ENST00000488153 WDR97A6NE52 1622 aa9.2□□□□□ -0.94
SMYD3-213ENST00000488153 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
SMYD3-213ENST00000488153 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
SMYD3-213ENST00000488153 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
SMYD3-213ENST00000488153 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
SMYD3-213ENST00000488153 GAPVD1Q14C86 1478 aa9.16□□□□□ -0.94
SMYD3-213ENST00000488153 CD44P16070 742 aaKnown RBP9.16□□□□□ -0.94
SMYD3-213ENST00000488153 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
SMYD3-213ENST00000488153 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.94
SMYD3-213ENST00000488153 ABCA5Q8WWZ7 1642 aa9.15□□□□□ -0.94
SMYD3-213ENST00000488153 GRIN2BQ13224 1484 aa9.15□□□□□ -0.95
SMYD3-213ENST00000488153 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
SMYD3-213ENST00000488153 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
SMYD3-213ENST00000488153 CHMP7Q8WUX9 453 aaPredicted RBP9.1□□□□□ -0.95
SMYD3-213ENST00000488153 MAGI1Q96QZ7 1491 aaPredicted RBP9.09□□□□□ -0.95
SMYD3-213ENST00000488153 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
SMYD3-213ENST00000488153 KIF27Q86VH2 1401 aa9.07□□□□□ -0.96
SMYD3-213ENST00000488153 NUBP1P53384 320 aa9.07□□□□□ -0.96
SMYD3-213ENST00000488153 IFNLR1Q8IU57 520 aaPredicted RBP9.07□□□□□ -0.96
SMYD3-213ENST00000488153 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
SMYD3-213ENST00000488153 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
SMYD3-213ENST00000488153 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
SMYD3-213ENST00000488153 ERICH3Q5RHP9 1530 aa9.06□□□□□ -0.96
SMYD3-213ENST00000488153 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
SMYD3-213ENST00000488153 ZNF579Q8NAF0 562 aaKnown RBP9.05□□□□□ -0.96
SMYD3-213ENST00000488153 FHAD1B1AJZ9 1412 aa9.05□□□□□ -0.96
SMYD3-213ENST00000488153 IGF1RP08069 1367 aa9.04□□□□□ -0.96
SMYD3-213ENST00000488153 ABCC10Q5T3U5 1492 aa9.03□□□□□ -0.96
SMYD3-213ENST00000488153 FAM69CQ0P6D2 419 aa9.03□□□□□ -0.96
SMYD3-213ENST00000488153 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
SMYD3-213ENST00000488153 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms