RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
PITRM1-210ENST00000488065 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
PITRM1-210ENST00000488065 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
PITRM1-210ENST00000488065 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
PITRM1-210ENST00000488065 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
PITRM1-210ENST00000488065 BIVM-ERCC5R4GMW8 1640 aa17.17■□□□□ 0.34
PITRM1-210ENST00000488065 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
PITRM1-210ENST00000488065 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
PITRM1-210ENST00000488065 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
PITRM1-210ENST00000488065 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
PITRM1-210ENST00000488065 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
PITRM1-210ENST00000488065 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
PITRM1-210ENST00000488065 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
PITRM1-210ENST00000488065 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
PITRM1-210ENST00000488065 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
PITRM1-210ENST00000488065 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
PITRM1-210ENST00000488065 NUP160Q12769 1436 aa16.96■□□□□ 0.3
PITRM1-210ENST00000488065 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
PITRM1-210ENST00000488065 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
PITRM1-210ENST00000488065 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
PITRM1-210ENST00000488065 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
PITRM1-210ENST00000488065 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
PITRM1-210ENST00000488065 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
PITRM1-210ENST00000488065 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
PITRM1-210ENST00000488065 EEA1Q15075 1411 aa16.83■□□□□ 0.28
PITRM1-210ENST00000488065 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
PITRM1-210ENST00000488065 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
PITRM1-210ENST00000488065 IGF1RP08069 1367 aa16.78■□□□□ 0.28
PITRM1-210ENST00000488065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
PITRM1-210ENST00000488065 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
PITRM1-210ENST00000488065 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
PITRM1-210ENST00000488065 DIP2BQ9P265 1576 aa16.71■□□□□ 0.27
PITRM1-210ENST00000488065 CUL7Q14999 1698 aa16.71■□□□□ 0.27
PITRM1-210ENST00000488065 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
PITRM1-210ENST00000488065 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
PITRM1-210ENST00000488065 KCNA4P22459 653 aa16.66■□□□□ 0.26
PITRM1-210ENST00000488065 ABCC10Q5T3U5 1492 aa16.66■□□□□ 0.26
PITRM1-210ENST00000488065 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
PITRM1-210ENST00000488065 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
PITRM1-210ENST00000488065 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
PITRM1-210ENST00000488065 TSPOAP1O95153 1857 aa16.63■□□□□ 0.25
PITRM1-210ENST00000488065 FAM69CQ0P6D2 419 aa16.6■□□□□ 0.25
PITRM1-210ENST00000488065 KDM6BO15054 1643 aa16.59■□□□□ 0.25
PITRM1-210ENST00000488065 KIF21BO75037 1637 aa16.59■□□□□ 0.25
PITRM1-210ENST00000488065 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
PITRM1-210ENST00000488065 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
PITRM1-210ENST00000488065 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
PITRM1-210ENST00000488065 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
PITRM1-210ENST00000488065 TTBK1Q5TCY1 1321 aaPredicted RBP16.51■□□□□ 0.23
PITRM1-210ENST00000488065 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
PITRM1-210ENST00000488065 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
PITRM1-210ENST00000488065 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
PITRM1-210ENST00000488065 PTPRGP23470 1445 aa16.45■□□□□ 0.22
PITRM1-210ENST00000488065 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
PITRM1-210ENST00000488065 KDM4FA0A1W2PPD8 638 aa16.44■□□□□ 0.22
PITRM1-210ENST00000488065 CTTNBP2Q8WZ74 1663 aa16.43■□□□□ 0.22
PITRM1-210ENST00000488065 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
PITRM1-210ENST00000488065 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
PITRM1-210ENST00000488065 ASXL2Q76L83 1435 aa16.43■□□□□ 0.22
PITRM1-210ENST00000488065 DISP1Q96F81 1524 aa16.42■□□□□ 0.22
PITRM1-210ENST00000488065 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
PITRM1-210ENST00000488065 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
PITRM1-210ENST00000488065 GLI2P10070 1586 aa16.38■□□□□ 0.21
PITRM1-210ENST00000488065 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
PITRM1-210ENST00000488065 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
PITRM1-210ENST00000488065 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
PITRM1-210ENST00000488065 UHRF1BP1LA0JNW5 1464 aa16.36■□□□□ 0.21
PITRM1-210ENST00000488065 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
PITRM1-210ENST00000488065 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
PITRM1-210ENST00000488065 ADGRL1O94910 1474 aa16.34■□□□□ 0.21
PITRM1-210ENST00000488065 EPRSP07814 1512 aaKnown RBP16.34■□□□□ 0.21
PITRM1-210ENST00000488065 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
PITRM1-210ENST00000488065 COL17A1Q9UMD9 1497 aaPredicted RBP16.33■□□□□ 0.2
PITRM1-210ENST00000488065 KDM5BQ9UGL1 1544 aa16.32■□□□□ 0.2
PITRM1-210ENST00000488065 P3H3Q8IVL6 736 aa16.3■□□□□ 0.2
PITRM1-210ENST00000488065 CLIP1P30622 1438 aa16.28■□□□□ 0.2
PITRM1-210ENST00000488065 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
PITRM1-210ENST00000488065 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
PITRM1-210ENST00000488065 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
PITRM1-210ENST00000488065 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
PITRM1-210ENST00000488065 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
PITRM1-210ENST00000488065 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
PITRM1-210ENST00000488065 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
PITRM1-210ENST00000488065 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
PITRM1-210ENST00000488065 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
PITRM1-210ENST00000488065 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
PITRM1-210ENST00000488065 CAPN15O75808 1086 aa16.2■□□□□ 0.18
PITRM1-210ENST00000488065 ABCA8O94911 1581 aa16.2■□□□□ 0.18
PITRM1-210ENST00000488065 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
PITRM1-210ENST00000488065 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
PITRM1-210ENST00000488065 FMN1Q68DA7 1419 aa16.13■□□□□ 0.17
PITRM1-210ENST00000488065 MAGI3Q5TCQ9 1506 aa16.12■□□□□ 0.17
PITRM1-210ENST00000488065 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
PITRM1-210ENST00000488065 DSG3P32926 999 aa16.11■□□□□ 0.17
PITRM1-210ENST00000488065 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
PITRM1-210ENST00000488065 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
PITRM1-210ENST00000488065 KCNH8Q96L42 1107 aa16.08■□□□□ 0.16
PITRM1-210ENST00000488065 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
PITRM1-210ENST00000488065 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
PITRM1-210ENST00000488065 CASKIN1Q8WXD9 1431 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms