RNA–Protein interactions for RNA: ENST00000487803.5

SMIM7-209, Transcript of small integral membrane protein 7, humanhuman

TSL 1 (best)

Gene SMIM7, Length 2,190 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-209ENST00000487803 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
SMIM7-209ENST00000487803 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
SMIM7-209ENST00000487803 KANK4Q5T7N3 995 aaPredicted RBP15.4■□□□□ 0.06
SMIM7-209ENST00000487803 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
SMIM7-209ENST00000487803 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
SMIM7-209ENST00000487803 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
SMIM7-209ENST00000487803 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
SMIM7-209ENST00000487803 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
SMIM7-209ENST00000487803 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
SMIM7-209ENST00000487803 EFCAB5A4FU69 1503 aa15.31■□□□□ 0.04
SMIM7-209ENST00000487803 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
SMIM7-209ENST00000487803 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
SMIM7-209ENST00000487803 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
SMIM7-209ENST00000487803 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
SMIM7-209ENST00000487803 ZNF316A6NFI3 1004 aaPredicted RBP15.29■□□□□ 0.04
SMIM7-209ENST00000487803 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMIM7-209ENST00000487803 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
SMIM7-209ENST00000487803 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
SMIM7-209ENST00000487803 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
SMIM7-209ENST00000487803 LRRC9Q6ZRR7 1453 aa15.26■□□□□ 0.03
SMIM7-209ENST00000487803 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
SMIM7-209ENST00000487803 PCF11O94913 1555 aaKnown RBP15.25■□□□□ 0.03
SMIM7-209ENST00000487803 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
SMIM7-209ENST00000487803 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
SMIM7-209ENST00000487803 SAMD9Q5K651 1589 aa15.2■□□□□ 0.02
SMIM7-209ENST00000487803 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
SMIM7-209ENST00000487803 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
SMIM7-209ENST00000487803 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
SMIM7-209ENST00000487803 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
SMIM7-209ENST00000487803 IQGAP2Q13576 1575 aa15.17■□□□□ 0.02
SMIM7-209ENST00000487803 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
SMIM7-209ENST00000487803 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
SMIM7-209ENST00000487803 P3H3Q8IVL6 736 aa15.15■□□□□ 0.02
SMIM7-209ENST00000487803 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
SMIM7-209ENST00000487803 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
SMIM7-209ENST00000487803 RAB3GAP2Q9H2M9 1393 aa15.11■□□□□ 0.01
SMIM7-209ENST00000487803 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
SMIM7-209ENST00000487803 ACIN1Q9UKV3 1341 aaKnown RBP15.09■□□□□ 0.01
SMIM7-209ENST00000487803 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
SMIM7-209ENST00000487803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
SMIM7-209ENST00000487803 ITGAEP38570 1179 aa15.09■□□□□ 0.01
SMIM7-209ENST00000487803 SETD5Q9C0A6 1442 aa15.08■□□□□ 0.01
SMIM7-209ENST00000487803 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0
SMIM7-209ENST00000487803 CENPBP07199 599 aaPredicted RBP15.07■□□□□ 0
SMIM7-209ENST00000487803 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
SMIM7-209ENST00000487803 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
SMIM7-209ENST00000487803 MAPKBP1O60336 1514 aa15.05■□□□□ -0
SMIM7-209ENST00000487803 NEUROD1Q13562 356 aa15.04■□□□□ -0
SMIM7-209ENST00000487803 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
SMIM7-209ENST00000487803 LRRIQ1Q96JM4 1722 aa15.03■□□□□ -0
SMIM7-209ENST00000487803 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
SMIM7-209ENST00000487803 FGD6Q6ZV73 1430 aa15.01□□□□□ -0.01
SMIM7-209ENST00000487803 KIAA0556O60303 1618 aa15□□□□□ -0.01
SMIM7-209ENST00000487803 HECW1Q76N89 1606 aa15□□□□□ -0.01
SMIM7-209ENST00000487803 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
SMIM7-209ENST00000487803 MIER1Q8N108 512 aa14.99□□□□□ -0.01
SMIM7-209ENST00000487803 CCDC18Q5T9S5 1454 aa14.99□□□□□ -0.01
SMIM7-209ENST00000487803 FBLN2P98095 1184 aa14.98□□□□□ -0.01
SMIM7-209ENST00000487803 NUP160Q12769 1436 aa14.98□□□□□ -0.01
SMIM7-209ENST00000487803 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
SMIM7-209ENST00000487803 DISP1Q96F81 1524 aa14.96□□□□□ -0.01
SMIM7-209ENST00000487803 SUPT6HQ7KZ85 1726 aaKnown RBP14.96□□□□□ -0.01
SMIM7-209ENST00000487803 NCOA2Q15596 1464 aa14.95□□□□□ -0.02
SMIM7-209ENST00000487803 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
SMIM7-209ENST00000487803 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
SMIM7-209ENST00000487803 CHD1O14646 1710 aa14.92□□□□□ -0.02
SMIM7-209ENST00000487803 CARMIL2Q6F5E8 1435 aa14.92□□□□□ -0.02
SMIM7-209ENST00000487803 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
SMIM7-209ENST00000487803 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
SMIM7-209ENST00000487803 HFM1A2PYH4 1435 aa14.9□□□□□ -0.02
SMIM7-209ENST00000487803 MAGI3Q5TCQ9 1506 aa14.89□□□□□ -0.03
SMIM7-209ENST00000487803 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
SMIM7-209ENST00000487803 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
SMIM7-209ENST00000487803 PTPRKQ15262 1439 aa14.87□□□□□ -0.03
SMIM7-209ENST00000487803 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
SMIM7-209ENST00000487803 GTF3C3Q9Y5Q9 886 aa14.87□□□□□ -0.03
SMIM7-209ENST00000487803 TCOF1Q13428 1488 aaKnown RBP14.85□□□□□ -0.03
SMIM7-209ENST00000487803 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
SMIM7-209ENST00000487803 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
SMIM7-209ENST00000487803 NAIPQ13075 1403 aa14.83□□□□□ -0.03
SMIM7-209ENST00000487803 SIN3AQ96ST3 1273 aa14.83□□□□□ -0.04
SMIM7-209ENST00000487803 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
SMIM7-209ENST00000487803 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
SMIM7-209ENST00000487803 CDK11AQ9UQ88 783 aaPredicted RBP14.8□□□□□ -0.04
SMIM7-209ENST00000487803 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
SMIM7-209ENST00000487803 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
SMIM7-209ENST00000487803 AKNAQ7Z591 1439 aa14.79□□□□□ -0.04
SMIM7-209ENST00000487803 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
SMIM7-209ENST00000487803 PRG4Q92954 1404 aaPredicted RBP14.76□□□□□ -0.05
SMIM7-209ENST00000487803 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
SMIM7-209ENST00000487803 ABCA8O94911 1581 aa14.76□□□□□ -0.05
SMIM7-209ENST00000487803 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
SMIM7-209ENST00000487803 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
SMIM7-209ENST00000487803 TONSLQ96HA7 1378 aa14.72□□□□□ -0.05
SMIM7-209ENST00000487803 ADCY10Q96PN6 1610 aa14.72□□□□□ -0.05
SMIM7-209ENST00000487803 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
SMIM7-209ENST00000487803 PTPRGP23470 1445 aa14.71□□□□□ -0.06
SMIM7-209ENST00000487803 TROQ12816 1431 aaPredicted RBP14.71□□□□□ -0.06
SMIM7-209ENST00000487803 ITSN2Q9NZM3 1697 aa14.7□□□□□ -0.06
SMIM7-209ENST00000487803 CLASP1Q7Z460 1538 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms