RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-222ENST00000487647 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
FGFR1-222ENST00000487647 CTTNBP2Q8WZ74 1663 aa22.97■■□□□ 1.27
FGFR1-222ENST00000487647 EFCAB5A4FU69 1503 aa22.95■■□□□ 1.26
FGFR1-222ENST00000487647 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
FGFR1-222ENST00000487647 GRIN2AQ12879 1464 aa22.9■■□□□ 1.26
FGFR1-222ENST00000487647 APLP2Q06481 763 aa22.9■■□□□ 1.26
FGFR1-222ENST00000487647 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
FGFR1-222ENST00000487647 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
FGFR1-222ENST00000487647 KIAA0586Q9BVV6 1533 aa22.85■■□□□ 1.25
FGFR1-222ENST00000487647 IQGAP2Q13576 1575 aa22.82■■□□□ 1.24
FGFR1-222ENST00000487647 SAMD9Q5K651 1589 aa22.81■■□□□ 1.24
FGFR1-222ENST00000487647 FMN1Q68DA7 1419 aa22.78■■□□□ 1.24
FGFR1-222ENST00000487647 PPARGC1BQ86YN6 1023 aaKnown RBP22.78■■□□□ 1.24
FGFR1-222ENST00000487647 NUP160Q12769 1436 aa22.77■■□□□ 1.24
FGFR1-222ENST00000487647 UGGT2Q9NYU1 1516 aa22.76■■□□□ 1.23
FGFR1-222ENST00000487647 FBLN2P98095 1184 aa22.76■■□□□ 1.23
FGFR1-222ENST00000487647 FHOD3Q2V2M9 1422 aa22.76■■□□□ 1.23
FGFR1-222ENST00000487647 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
FGFR1-222ENST00000487647 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
FGFR1-222ENST00000487647 CASKIN1Q8WXD9 1431 aa22.7■■□□□ 1.23
FGFR1-222ENST00000487647 CEP170Q5SW79 1584 aa22.7■■□□□ 1.22
FGFR1-222ENST00000487647 FYCO1Q9BQS8 1478 aa22.68■■□□□ 1.22
FGFR1-222ENST00000487647 JPH4Q96JJ6 628 aa22.61■■□□□ 1.21
FGFR1-222ENST00000487647 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
FGFR1-222ENST00000487647 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
FGFR1-222ENST00000487647 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
FGFR1-222ENST00000487647 CARMIL2Q6F5E8 1435 aa22.58■■□□□ 1.21
FGFR1-222ENST00000487647 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
FGFR1-222ENST00000487647 KIAA0556O60303 1618 aa22.58■■□□□ 1.21
FGFR1-222ENST00000487647 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
FGFR1-222ENST00000487647 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
FGFR1-222ENST00000487647 CHD1O14646 1710 aa22.53■■□□□ 1.2
FGFR1-222ENST00000487647 LRRC9Q6ZRR7 1453 aa22.52■■□□□ 1.2
FGFR1-222ENST00000487647 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
FGFR1-222ENST00000487647 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
FGFR1-222ENST00000487647 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
FGFR1-222ENST00000487647 PRG4Q92954 1404 aaPredicted RBP22.43■■□□□ 1.18
FGFR1-222ENST00000487647 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
FGFR1-222ENST00000487647 RRBP1Q9P2E9 1410 aaKnown RBP22.39■■□□□ 1.18
FGFR1-222ENST00000487647 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.17
FGFR1-222ENST00000487647 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
FGFR1-222ENST00000487647 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
FGFR1-222ENST00000487647 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
FGFR1-222ENST00000487647 PTPRGP23470 1445 aa22.33■■□□□ 1.17
FGFR1-222ENST00000487647 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
FGFR1-222ENST00000487647 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
FGFR1-222ENST00000487647 CCNB3Q8WWL7 1395 aa22.32■■□□□ 1.16
FGFR1-222ENST00000487647 LRRIQ1Q96JM4 1722 aa22.32■■□□□ 1.16
FGFR1-222ENST00000487647 CDK11AQ9UQ88 783 aaPredicted RBP22.31■■□□□ 1.16
FGFR1-222ENST00000487647 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
FGFR1-222ENST00000487647 PHLDB1Q86UU1 1377 aa22.28■■□□□ 1.16
FGFR1-222ENST00000487647 ABCA8O94911 1581 aa22.28■■□□□ 1.16
FGFR1-222ENST00000487647 HRCP23327 699 aa22.25■■□□□ 1.15
FGFR1-222ENST00000487647 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
FGFR1-222ENST00000487647 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
FGFR1-222ENST00000487647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.24■■□□□ 1.154e-8■□□□□ 10.2
FGFR1-222ENST00000487647 NCOA2Q15596 1464 aa22.23■■□□□ 1.15
FGFR1-222ENST00000487647 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
FGFR1-222ENST00000487647 MAGI3Q5TCQ9 1506 aa22.21■■□□□ 1.15
FGFR1-222ENST00000487647 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
FGFR1-222ENST00000487647 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
FGFR1-222ENST00000487647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.2■■□□□ 1.14
FGFR1-222ENST00000487647 HNRNPUL2Q1KMD3 747 aaKnown RBP22.2■■□□□ 1.14
FGFR1-222ENST00000487647 MYOM3Q5VTT5 1437 aa22.17■■□□□ 1.14
FGFR1-222ENST00000487647 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
FGFR1-222ENST00000487647 TROQ12816 1431 aaPredicted RBP22.16■■□□□ 1.14
FGFR1-222ENST00000487647 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
FGFR1-222ENST00000487647 ATP10BO94823 1461 aa22.15■■□□□ 1.14
FGFR1-222ENST00000487647 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
FGFR1-222ENST00000487647 ZEB1P37275 1124 aaPredicted RBP22.14■■□□□ 1.14
FGFR1-222ENST00000487647 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
FGFR1-222ENST00000487647 MIA2Q96PC5 1412 aa22.11■■□□□ 1.13
FGFR1-222ENST00000487647 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
FGFR1-222ENST00000487647 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
FGFR1-222ENST00000487647 ABCC2Q92887 1545 aa22.1■■□□□ 1.13
FGFR1-222ENST00000487647 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
FGFR1-222ENST00000487647 TCOF1Q13428 1488 aaKnown RBP22.04■■□□□ 1.12
FGFR1-222ENST00000487647 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
FGFR1-222ENST00000487647 ITGAEP38570 1179 aa22■■□□□ 1.11
FGFR1-222ENST00000487647 PTPN23Q9H3S7 1636 aa22■■□□□ 1.11
FGFR1-222ENST00000487647 KDM5BQ9UGL1 1544 aa21.98■■□□□ 1.11
FGFR1-222ENST00000487647 KIF14Q15058 1648 aa21.97■■□□□ 1.11
FGFR1-222ENST00000487647 GPATCH8Q9UKJ3 1502 aaKnown RBP21.94■■□□□ 1.1
FGFR1-222ENST00000487647 ABCC10Q5T3U5 1492 aa21.94■■□□□ 1.1
FGFR1-222ENST00000487647 SETD5Q9C0A6 1442 aa21.92■■□□□ 1.1
FGFR1-222ENST00000487647 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
FGFR1-222ENST00000487647 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
FGFR1-222ENST00000487647 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
FGFR1-222ENST00000487647 RAB3GAP2Q9H2M9 1393 aa21.86■■□□□ 1.09
FGFR1-222ENST00000487647 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
FGFR1-222ENST00000487647 PTPRKQ15262 1439 aa21.85■■□□□ 1.09
FGFR1-222ENST00000487647 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
FGFR1-222ENST00000487647 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
FGFR1-222ENST00000487647 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
FGFR1-222ENST00000487647 DAPK1P53355 1430 aa21.8■■□□□ 1.08
FGFR1-222ENST00000487647 ROCK1Q13464 1354 aa21.8■■□□□ 1.08
FGFR1-222ENST00000487647 DHX57Q6P158 1386 aaKnown RBP21.8■■□□□ 1.08
FGFR1-222ENST00000487647 ZNF644Q9H582 1327 aaPredicted RBP21.8■■□□□ 1.08
FGFR1-222ENST00000487647 NPM1P06748 294 aaKnown RBP eCLIP21.8■■□□□ 1.08
FGFR1-222ENST00000487647 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms