RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
SRRT-212ENST00000487311 KIF13AQ9H1H9 1805 aa28.51■■■□□ 2.15
SRRT-212ENST00000487311 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
SRRT-212ENST00000487311 KIAA0586Q9BVV6 1533 aa28.45■■■□□ 2.15
SRRT-212ENST00000487311 FAM69CQ0P6D2 419 aa28.45■■■□□ 2.14
SRRT-212ENST00000487311 NPM1P06748 294 aaKnown RBP eCLIP28.44■■■□□ 2.14
SRRT-212ENST00000487311 ADCY10Q96PN6 1610 aa28.39■■■□□ 2.13
SRRT-212ENST00000487311 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.13
SRRT-212ENST00000487311 CARMIL1Q5VZK9 1371 aa28.36■■■□□ 2.13
SRRT-212ENST00000487311 CUL7Q14999 1698 aa28.35■■■□□ 2.13
SRRT-212ENST00000487311 MAPKBP1O60336 1514 aa28.33■■■□□ 2.13
SRRT-212ENST00000487311 TTBK1Q5TCY1 1321 aaPredicted RBP28.29■■■□□ 2.12
SRRT-212ENST00000487311 DIP2BQ9P265 1576 aa28.27■■■□□ 2.12
SRRT-212ENST00000487311 PTPRGP23470 1445 aa28.26■■■□□ 2.11
SRRT-212ENST00000487311 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
SRRT-212ENST00000487311 CARMIL2Q6F5E8 1435 aa28.14■■■□□ 2.1
SRRT-212ENST00000487311 TSPOAP1O95153 1857 aa28.13■■■□□ 2.09
SRRT-212ENST00000487311 IQGAP2Q13576 1575 aa28.11■■■□□ 2.09
SRRT-212ENST00000487311 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
SRRT-212ENST00000487311 DISP1Q96F81 1524 aa28.07■■■□□ 2.08
SRRT-212ENST00000487311 KDM4FA0A1W2PPD8 638 aa28.05■■■□□ 2.08
SRRT-212ENST00000487311 KDM6BO15054 1643 aa28.05■■■□□ 2.08
SRRT-212ENST00000487311 ASXL2Q76L83 1435 aa28.04■■■□□ 2.08
SRRT-212ENST00000487311 RAPGEF2Q9Y4G8 1499 aa28.02■■■□□ 2.08
SRRT-212ENST00000487311 UACAQ9BZF9 1416 aa28.01■■■□□ 2.08
SRRT-212ENST00000487311 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
SRRT-212ENST00000487311 PLB1Q6P1J6 1458 aa27.97■■■□□ 2.07
SRRT-212ENST00000487311 UGGT2Q9NYU1 1516 aa27.95■■■□□ 2.06
SRRT-212ENST00000487311 GLI2P10070 1586 aa27.93■■■□□ 2.06
SRRT-212ENST00000487311 PPRC1Q5VV67 1664 aaKnown RBP27.91■■■□□ 2.06
SRRT-212ENST00000487311 KDM5BQ9UGL1 1544 aa27.91■■■□□ 2.06
SRRT-212ENST00000487311 KIAA0556O60303 1618 aa27.86■■■□□ 2.05
SRRT-212ENST00000487311 EPRSP07814 1512 aaKnown RBP27.86■■■□□ 2.05
SRRT-212ENST00000487311 COL17A1Q9UMD9 1497 aaPredicted RBP27.85■■■□□ 2.05
SRRT-212ENST00000487311 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
SRRT-212ENST00000487311 MAP3K4Q9Y6R4 1608 aa27.77■■■□□ 2.04
SRRT-212ENST00000487311 PRXQ9BXM0 1461 aa27.71■■■□□ 2.03
SRRT-212ENST00000487311 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
SRRT-212ENST00000487311 WDR7Q9Y4E6 1490 aa27.7■■■□□ 2.02
SRRT-212ENST00000487311 KCNH8Q96L42 1107 aa27.68■■■□□ 2.02
SRRT-212ENST00000487311 GOLGA3Q08378 1498 aa27.66■■■□□ 2.02
SRRT-212ENST00000487311 TEX14Q8IWB6 1497 aa27.66■■■□□ 2.02
SRRT-212ENST00000487311 ABCA8O94911 1581 aa27.65■■■□□ 2.02
SRRT-212ENST00000487311 ADGRL1O94910 1474 aa27.64■■■□□ 2.01
SRRT-212ENST00000487311 P3H3Q8IVL6 736 aa27.62■■■□□ 2.01
SRRT-212ENST00000487311 CD109Q6YHK3 1445 aa27.59■■■□□ 2.01
SRRT-212ENST00000487311 ARID3CA6NKF2 412 aa27.57■■■□□ 2
SRRT-212ENST00000487311 MAGI3Q5TCQ9 1506 aa27.54■■■□□ 2
SRRT-212ENST00000487311 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
SRRT-212ENST00000487311 ATP10BO94823 1461 aa27.5■■□□□ 1.99
SRRT-212ENST00000487311 CFAP43Q8NDM7 1665 aa27.49■■□□□ 1.99
SRRT-212ENST00000487311 FAM9AQ8IZU1 332 aaPredicted RBP27.41■■□□□ 1.98
SRRT-212ENST00000487311 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
SRRT-212ENST00000487311 SAMD9Q5K651 1589 aa27.35■■□□□ 1.97
SRRT-212ENST00000487311 ILDR1Q86SU0 546 aaPredicted RBP27.34■■□□□ 1.97
SRRT-212ENST00000487311 ARAP3Q8WWN8 1544 aa27.34■■□□□ 1.97
SRRT-212ENST00000487311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
SRRT-212ENST00000487311 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
SRRT-212ENST00000487311 HECW2Q9P2P5 1572 aa27.3■■□□□ 1.96
SRRT-212ENST00000487311 RAPGEF3O95398 923 aa27.29■■□□□ 1.96
SRRT-212ENST00000487311 RAPGEF6Q8TEU7 1601 aa27.29■■□□□ 1.96
SRRT-212ENST00000487311 ABCA9Q8IUA7 1624 aa27.28■■□□□ 1.96
SRRT-212ENST00000487311 KIF21BO75037 1637 aa27.27■■□□□ 1.96
SRRT-212ENST00000487311 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
SRRT-212ENST00000487311 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
SRRT-212ENST00000487311 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
SRRT-212ENST00000487311 EEA1Q15075 1411 aa27.21■■□□□ 1.95
SRRT-212ENST00000487311 NEO1Q92859 1461 aa27.17■■□□□ 1.94
SRRT-212ENST00000487311 PLEKHD1A6NEE1 506 aa27.15■■□□□ 1.94
SRRT-212ENST00000487311 FRMPD1Q5SYB0 1578 aa27.1■■□□□ 1.93
SRRT-212ENST00000487311 ADAMTSL3P82987 1691 aa27.08■■□□□ 1.92
SRRT-212ENST00000487311 EHMT2Q96KQ7 1210 aa27.07■■□□□ 1.92
SRRT-212ENST00000487311 PTPRMP28827 1452 aa27.06■■□□□ 1.92
SRRT-212ENST00000487311 ARID4BQ4LE39 1312 aaPredicted RBP27.04■■□□□ 1.92
SRRT-212ENST00000487311 AKNAQ7Z591 1439 aa27.03■■□□□ 1.92
SRRT-212ENST00000487311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.03■■□□□ 1.92
SRRT-212ENST00000487311 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
SRRT-212ENST00000487311 EFCAB5A4FU69 1503 aa27■■□□□ 1.91
SRRT-212ENST00000487311 FANCAO15360 1455 aa26.99■■□□□ 1.91
SRRT-212ENST00000487311 BCORL1Q5H9F3 1711 aa26.99■■□□□ 1.91
SRRT-212ENST00000487311 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
SRRT-212ENST00000487311 UBTFP17480 764 aaKnown RBP26.96■■□□□ 1.91
SRRT-212ENST00000487311 TTC37Q6PGP7 1564 aa26.96■■□□□ 1.91
SRRT-212ENST00000487311 RICTORQ6R327 1708 aa26.96■■□□□ 1.91
SRRT-212ENST00000487311 MADDQ8WXG6 1647 aa26.94■■□□□ 1.9
SRRT-212ENST00000487311 ATP1B4Q9UN42 357 aaPredicted RBP26.93■■□□□ 1.9
SRRT-212ENST00000487311 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
SRRT-212ENST00000487311 ARHGEF40Q8TER5 1519 aa26.9■■□□□ 1.9
SRRT-212ENST00000487311 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
SRRT-212ENST00000487311 PLCH2O75038 1416 aa26.87■■□□□ 1.89
SRRT-212ENST00000487311 CFAP74Q9C0B2 1584 aa26.86■■□□□ 1.89
SRRT-212ENST00000487311 ARHGAP35Q9NRY4 1499 aa26.86■■□□□ 1.89
SRRT-212ENST00000487311 SIGLEC1Q9BZZ2 1709 aa26.85■■□□□ 1.89
SRRT-212ENST00000487311 SCAPERQ9BY12 1400 aa26.84■■□□□ 1.89
SRRT-212ENST00000487311 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
SRRT-212ENST00000487311 ZMYM4Q5VZL5 1548 aa26.83■■□□□ 1.89
SRRT-212ENST00000487311 RIMS1Q86UR5 1692 aaKnown RBP26.82■■□□□ 1.88
SRRT-212ENST00000487311 LMTK3Q96Q04 1460 aa26.82■■□□□ 1.88
SRRT-212ENST00000487311 HECW1Q76N89 1606 aa26.81■■□□□ 1.88
SRRT-212ENST00000487311 MLECQ14165 292 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms