RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
TRIM56-204ENST00000487252 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
TRIM56-204ENST00000487252 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
TRIM56-204ENST00000487252 ADCY10Q96PN6 1610 aa22.13■■□□□ 1.13
TRIM56-204ENST00000487252 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
TRIM56-204ENST00000487252 NPM1P06748 294 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRIM56-204ENST00000487252 FBXO41Q8TF61 875 aa22.1■■□□□ 1.13
TRIM56-204ENST00000487252 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
TRIM56-204ENST00000487252 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
TRIM56-204ENST00000487252 PPRC1Q5VV67 1664 aaKnown RBP21.98■■□□□ 1.11
TRIM56-204ENST00000487252 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
TRIM56-204ENST00000487252 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.13e-7■■□□□ 13.1
TRIM56-204ENST00000487252 COL17A1Q9UMD9 1497 aaPredicted RBP21.9■■□□□ 1.1
TRIM56-204ENST00000487252 GLI2P10070 1586 aa21.9■■□□□ 1.1
TRIM56-204ENST00000487252 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
TRIM56-204ENST00000487252 LMTK3Q96Q04 1460 aa21.79■■□□□ 1.08
TRIM56-204ENST00000487252 PLB1Q6P1J6 1458 aa21.77■■□□□ 1.08
TRIM56-204ENST00000487252 TOP2BQ02880 1626 aa21.77■■□□□ 1.08
TRIM56-204ENST00000487252 ASXL2Q76L83 1435 aa21.76■■□□□ 1.07
TRIM56-204ENST00000487252 ABCC2Q92887 1545 aa21.75■■□□□ 1.07
TRIM56-204ENST00000487252 KIAA0586Q9BVV6 1533 aa21.73■■□□□ 1.07
TRIM56-204ENST00000487252 MAP3K4Q9Y6R4 1608 aa21.73■■□□□ 1.07
TRIM56-204ENST00000487252 PTPRGP23470 1445 aa21.68■■□□□ 1.06
TRIM56-204ENST00000487252 TEX14Q8IWB6 1497 aa21.68■■□□□ 1.06
TRIM56-204ENST00000487252 EPRSP07814 1512 aaKnown RBP21.65■■□□□ 1.06
TRIM56-204ENST00000487252 SOCS7O14512 581 aa21.64■■□□□ 1.05
TRIM56-204ENST00000487252 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
TRIM56-204ENST00000487252 CUL7Q14999 1698 aa21.63■■□□□ 1.05
TRIM56-204ENST00000487252 ILDR2Q71H61 639 aa21.58■■□□□ 1.05
TRIM56-204ENST00000487252 TNIKQ9UKE5 1360 aa21.57■■□□□ 1.04
TRIM56-204ENST00000487252 KDM5BQ9UGL1 1544 aa21.55■■□□□ 1.04
TRIM56-204ENST00000487252 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
TRIM56-204ENST00000487252 KIF21BO75037 1637 aa21.5■■□□□ 1.03
TRIM56-204ENST00000487252 CARMIL2Q6F5E8 1435 aa21.48■■□□□ 1.03
TRIM56-204ENST00000487252 PTPRMP28827 1452 aa21.48■■□□□ 1.03
TRIM56-204ENST00000487252 ADAMTSL3P82987 1691 aa21.46■■□□□ 1.03
TRIM56-204ENST00000487252 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
TRIM56-204ENST00000487252 IGF1RP08069 1367 aa21.45■■□□□ 1.02
TRIM56-204ENST00000487252 ZCCHC11Q5TAX3 1644 aaKnown RBP21.44■■□□□ 1.02
TRIM56-204ENST00000487252 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
TRIM56-204ENST00000487252 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
TRIM56-204ENST00000487252 DISP3Q9P2K9 1392 aa21.42■■□□□ 1.02
TRIM56-204ENST00000487252 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.01
TRIM56-204ENST00000487252 DISP1Q96F81 1524 aa21.37■■□□□ 1.01
TRIM56-204ENST00000487252 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
TRIM56-204ENST00000487252 CERKQ8TCT0 537 aa21.35■■□□□ 1.01
TRIM56-204ENST00000487252 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
TRIM56-204ENST00000487252 CD109Q6YHK3 1445 aa21.34■■□□□ 1.01
TRIM56-204ENST00000487252 ARAP3Q8WWN8 1544 aa21.32■■□□□ 1
TRIM56-204ENST00000487252 KIF27Q86VH2 1401 aa21.27■■□□□ 1
TRIM56-204ENST00000487252 BCORL1Q5H9F3 1711 aa21.26■□□□□ 0.99
TRIM56-204ENST00000487252 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
TRIM56-204ENST00000487252 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
TRIM56-204ENST00000487252 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
TRIM56-204ENST00000487252 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
TRIM56-204ENST00000487252 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
TRIM56-204ENST00000487252 HSPA2P54652 639 aa21.18■□□□□ 0.98
TRIM56-204ENST00000487252 KIAA0556O60303 1618 aa21.18■□□□□ 0.98
TRIM56-204ENST00000487252 PHLDB1Q86UU1 1377 aa21.14■□□□□ 0.98
TRIM56-204ENST00000487252 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
TRIM56-204ENST00000487252 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
TRIM56-204ENST00000487252 ABCA8O94911 1581 aa21.08■□□□□ 0.97
TRIM56-204ENST00000487252 FRMPD1Q5SYB0 1578 aa21.07■□□□□ 0.96
TRIM56-204ENST00000487252 RAPGEF3O95398 923 aa21.06■□□□□ 0.96
TRIM56-204ENST00000487252 ABCA9Q8IUA7 1624 aa21.02■□□□□ 0.96
TRIM56-204ENST00000487252 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
TRIM56-204ENST00000487252 NEO1Q92859 1461 aa21.01■□□□□ 0.95
TRIM56-204ENST00000487252 ARHGEF40Q8TER5 1519 aa20.99■□□□□ 0.95
TRIM56-204ENST00000487252 STRCQ7RTU9 1775 aa20.95■□□□□ 0.94
TRIM56-204ENST00000487252 SUPT5HO00267 1087 aaKnown RBP20.94■□□□□ 0.94
TRIM56-204ENST00000487252 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
TRIM56-204ENST00000487252 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
TRIM56-204ENST00000487252 TTC37Q6PGP7 1564 aa20.92■□□□□ 0.94
TRIM56-204ENST00000487252 SIGLEC1Q9BZZ2 1709 aa20.91■□□□□ 0.94
TRIM56-204ENST00000487252 GOLGA3Q08378 1498 aa20.89■□□□□ 0.94
TRIM56-204ENST00000487252 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
TRIM56-204ENST00000487252 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
TRIM56-204ENST00000487252 RICTORQ6R327 1708 aa20.89■□□□□ 0.93
TRIM56-204ENST00000487252 PREX1Q8TCU6 1659 aa20.89■□□□□ 0.93
TRIM56-204ENST00000487252 ATP10BO94823 1461 aa20.88■□□□□ 0.93
TRIM56-204ENST00000487252 FANCAO15360 1455 aa20.88■□□□□ 0.93
TRIM56-204ENST00000487252 IQSEC2Q5JU85 1478 aa20.86■□□□□ 0.93
TRIM56-204ENST00000487252 FER1L4A9Z1Z3 1794 aa20.85■□□□□ 0.93
TRIM56-204ENST00000487252 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
TRIM56-204ENST00000487252 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
TRIM56-204ENST00000487252 LTBP4Q8N2S1 1624 aa20.83■□□□□ 0.93
TRIM56-204ENST00000487252 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
TRIM56-204ENST00000487252 ZMYM4Q5VZL5 1548 aa20.82■□□□□ 0.92
TRIM56-204ENST00000487252 AKNAQ7Z591 1439 aa20.81■□□□□ 0.92
TRIM56-204ENST00000487252 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
TRIM56-204ENST00000487252 PTPRTO14522 1441 aa20.8■□□□□ 0.92
TRIM56-204ENST00000487252 ARHGEF12Q9NZN5 1544 aa20.77■□□□□ 0.92
TRIM56-204ENST00000487252 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
TRIM56-204ENST00000487252 ZFYVE16Q7Z3T8 1539 aa20.75■□□□□ 0.91
TRIM56-204ENST00000487252 MAGI2Q86UL8 1455 aa20.75■□□□□ 0.91
TRIM56-204ENST00000487252 ARID3CA6NKF2 412 aa20.72■□□□□ 0.91
TRIM56-204ENST00000487252 SETD1BQ9UPS6 1966 aaKnown RBP20.72■□□□□ 0.91
TRIM56-204ENST00000487252 UHRF1BP1Q6BDS2 1440 aa20.69■□□□□ 0.9
TRIM56-204ENST00000487252 MLECQ14165 292 aa20.68■□□□□ 0.9
TRIM56-204ENST00000487252 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms