RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 GRIN2BQ13224 1484 aa8.05□□□□□ -1.12
RAB3GAP1-204ENST00000487003 SNAPC4Q5SXM2 1469 aa8.05□□□□□ -1.12
RAB3GAP1-204ENST00000487003 PLEKHD1A6NEE1 506 aa8.04□□□□□ -1.12
RAB3GAP1-204ENST00000487003 TOP2BQ02880 1626 aa8.03□□□□□ -1.12
RAB3GAP1-204ENST00000487003 MTUS2Q5JR59 1369 aa8.02□□□□□ -1.13
RAB3GAP1-204ENST00000487003 TNIKQ9UKE5 1360 aa8.02□□□□□ -1.13
RAB3GAP1-204ENST00000487003 FHOD3Q2V2M9 1422 aa8.02□□□□□ -1.13
RAB3GAP1-204ENST00000487003 CHIC2Q9UKJ5 165 aa8.01□□□□□ -1.13
RAB3GAP1-204ENST00000487003 CARMIL2Q6F5E8 1435 aa8.01□□□□□ -1.13
RAB3GAP1-204ENST00000487003 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
RAB3GAP1-204ENST00000487003 FHAD1B1AJZ9 1412 aa8□□□□□ -1.13
RAB3GAP1-204ENST00000487003 TRIM26Q12899 539 aaPredicted RBP7.99□□□□□ -1.13
RAB3GAP1-204ENST00000487003 TRIM52Q96A61 297 aa7.99□□□□□ -1.13
RAB3GAP1-204ENST00000487003 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
RAB3GAP1-204ENST00000487003 PTPRGP23470 1445 aa7.97□□□□□ -1.13
RAB3GAP1-204ENST00000487003 PRG4Q92954 1404 aaPredicted RBP7.95□□□□□ -1.14
RAB3GAP1-204ENST00000487003 KANK4Q5T7N3 995 aaPredicted RBP7.94□□□□□ -1.14
RAB3GAP1-204ENST00000487003 CFDP1Q9UEE9 299 aaPredicted RBP7.94□□□□□ -1.14
RAB3GAP1-204ENST00000487003 WDR62O43379 1518 aa7.93□□□□□ -1.14
RAB3GAP1-204ENST00000487003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.143e-6■□□□□ 8.7
RAB3GAP1-204ENST00000487003 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
RAB3GAP1-204ENST00000487003 ARID4BQ4LE39 1312 aaPredicted RBP7.91□□□□□ -1.14
RAB3GAP1-204ENST00000487003 TSPY4P0CV99 314 aa7.91□□□□□ -1.14
RAB3GAP1-204ENST00000487003 TSPY10P0CW01 314 aa7.91□□□□□ -1.14
RAB3GAP1-204ENST00000487003 FAM69CQ0P6D2 419 aa7.9□□□□□ -1.14
RAB3GAP1-204ENST00000487003 SENP3Q9H4L4 574 aaPredicted RBP7.9□□□□□ -1.14
RAB3GAP1-204ENST00000487003 RRP7BPQ9NSQ0 103 aa7.9□□□□□ -1.14
RAB3GAP1-204ENST00000487003 GRIN2AQ12879 1464 aa7.9□□□□□ -1.14
RAB3GAP1-204ENST00000487003 ESF1Q9H501 851 aaKnown RBP7.9□□□□□ -1.14
RAB3GAP1-204ENST00000487003 MLECQ14165 292 aa7.9□□□□□ -1.15
RAB3GAP1-204ENST00000487003 BIVM-ERCC5R4GMW8 1640 aa7.89□□□□□ -1.15
RAB3GAP1-204ENST00000487003 PRXQ9BXM0 1461 aa7.89□□□□□ -1.15
RAB3GAP1-204ENST00000487003 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
RAB3GAP1-204ENST00000487003 MAGI1Q96QZ7 1491 aaPredicted RBP7.89□□□□□ -1.15
RAB3GAP1-204ENST00000487003 FMN1Q68DA7 1419 aa7.88□□□□□ -1.15
RAB3GAP1-204ENST00000487003 NEUROD1Q13562 356 aa7.87□□□□□ -1.15
RAB3GAP1-204ENST00000487003 THOC2Q8NI27 1593 aaKnown RBP7.86□□□□□ -1.15
RAB3GAP1-204ENST00000487003 CCNB3Q8WWL7 1395 aa7.86□□□□□ -1.15
RAB3GAP1-204ENST00000487003 VPS8Q8N3P4 1428 aa7.86□□□□□ -1.15
RAB3GAP1-204ENST00000487003 ERICH3Q5RHP9 1530 aa7.85□□□□□ -1.15
RAB3GAP1-204ENST00000487003 CHGAP10645 457 aaKnown RBP7.85□□□□□ -1.15
RAB3GAP1-204ENST00000487003 KIAA0586Q9BVV6 1533 aa7.85□□□□□ -1.15
RAB3GAP1-204ENST00000487003 PRDM2Q13029 1718 aa7.85□□□□□ -1.15
RAB3GAP1-204ENST00000487003 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
RAB3GAP1-204ENST00000487003 HNRNPMP52272 730 aaKnown RBP eCLIP7.84□□□□□ -1.152e-7■■■■■ 27
RAB3GAP1-204ENST00000487003 BCANQ96GW7 911 aa7.82□□□□□ -1.16
RAB3GAP1-204ENST00000487003 EFCAB2Q5VUJ9 269 aa7.82□□□□□ -1.16
RAB3GAP1-204ENST00000487003 ARHGAP35Q9NRY4 1499 aa7.82□□□□□ -1.16
RAB3GAP1-204ENST00000487003 ARAP1Q96P48 1450 aa7.82□□□□□ -1.16
RAB3GAP1-204ENST00000487003 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
RAB3GAP1-204ENST00000487003 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
RAB3GAP1-204ENST00000487003 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
RAB3GAP1-204ENST00000487003 IQGAP2Q13576 1575 aa7.8□□□□□ -1.16
RAB3GAP1-204ENST00000487003 GGT6Q6P531 493 aa7.8□□□□□ -1.16
RAB3GAP1-204ENST00000487003 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
RAB3GAP1-204ENST00000487003 STAG3Q9UJ98 1225 aa7.79□□□□□ -1.16
RAB3GAP1-204ENST00000487003 KIF21BO75037 1637 aa7.79□□□□□ -1.16
RAB3GAP1-204ENST00000487003 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
RAB3GAP1-204ENST00000487003 CUL7Q14999 1698 aa7.79□□□□□ -1.16
RAB3GAP1-204ENST00000487003 ADAMTS12P58397 1594 aa7.78□□□□□ -1.16
RAB3GAP1-204ENST00000487003 UACAQ9BZF9 1416 aa7.77□□□□□ -1.17
RAB3GAP1-204ENST00000487003 ABCA5Q8WWZ7 1642 aa7.76□□□□□ -1.17
RAB3GAP1-204ENST00000487003 PBRM1Q86U86 1689 aa7.75□□□□□ -1.17
RAB3GAP1-204ENST00000487003 RAPGEF3O95398 923 aa7.75□□□□□ -1.17
RAB3GAP1-204ENST00000487003 AFAP1Q8N556 730 aa7.75□□□□□ -1.17
RAB3GAP1-204ENST00000487003 CDK13Q14004 1512 aaKnown RBP7.75□□□□□ -1.17
RAB3GAP1-204ENST00000487003 SLC4A1APQ9BWU0 796 aaKnown RBP7.74□□□□□ -1.17
RAB3GAP1-204ENST00000487003 CCDC18Q5T9S5 1454 aa7.74□□□□□ -1.17
RAB3GAP1-204ENST00000487003 DNAJC5Q9H3Z4 198 aa7.74□□□□□ -1.17
RAB3GAP1-204ENST00000487003 SPAG9O60271 1321 aaKnown RBP7.73□□□□□ -1.17
RAB3GAP1-204ENST00000487003 KIF3BO15066 747 aa7.73□□□□□ -1.17
RAB3GAP1-204ENST00000487003 RGL3Q3MIN7 710 aa7.73□□□□□ -1.17
RAB3GAP1-204ENST00000487003 NUP160Q12769 1436 aa7.73□□□□□ -1.17
RAB3GAP1-204ENST00000487003 KDM2AQ9Y2K7 1162 aa7.72□□□□□ -1.17
RAB3GAP1-204ENST00000487003 CEP170Q5SW79 1584 aa7.72□□□□□ -1.17
RAB3GAP1-204ENST00000487003 CASKIN1Q8WXD9 1431 aa7.71□□□□□ -1.17
RAB3GAP1-204ENST00000487003 FOXD1Q16676 465 aa7.71□□□□□ -1.17
RAB3GAP1-204ENST00000487003 CHD1O14646 1710 aa7.7□□□□□ -1.18
RAB3GAP1-204ENST00000487003 EFCAB5A4FU69 1503 aa7.69□□□□□ -1.18
RAB3GAP1-204ENST00000487003 PHLDB1Q86UU1 1377 aa7.69□□□□□ -1.18
RAB3GAP1-204ENST00000487003 EPRSP07814 1512 aaKnown RBP7.68□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ERCC6L2Q5T890 1561 aa7.68□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ARHGEF11O15085 1522 aa7.67□□□□□ -1.18
RAB3GAP1-204ENST00000487003 CD109Q6YHK3 1445 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 DISP1Q96F81 1524 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 TROQ12816 1431 aaPredicted RBP7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 LRRC9Q6ZRR7 1453 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ARHGAP5Q13017 1502 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 PPP1R15AO75807 674 aaPredicted RBP7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ZEB1P37275 1124 aaPredicted RBP7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ASXL2Q76L83 1435 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 NCOA2Q15596 1464 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 FYCO1Q9BQS8 1478 aa7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 PCF11O94913 1555 aaKnown RBP7.66□□□□□ -1.18
RAB3GAP1-204ENST00000487003 ATP10BO94823 1461 aa7.65□□□□□ -1.18
RAB3GAP1-204ENST00000487003 WASHC2CQ9Y4E1 1318 aa7.65□□□□□ -1.18
RAB3GAP1-204ENST00000487003 SIN3AQ96ST3 1273 aa7.65□□□□□ -1.18
RAB3GAP1-204ENST00000487003 SCAPERQ9BY12 1400 aa7.64□□□□□ -1.19
RAB3GAP1-204ENST00000487003 KIAA0556O60303 1618 aa7.64□□□□□ -1.19
RAB3GAP1-204ENST00000487003 NUTM2DQ5VT03 806 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms