RNA–Protein interactions for RNA: ENST00000486509.1

CDC7-204, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-204ENST00000486509 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
CDC7-204ENST00000486509 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
CDC7-204ENST00000486509 GSE1Q14687 1217 aa11.09□□□□□ -0.63
CDC7-204ENST00000486509 PHF12Q96QT6 1004 aa11.08□□□□□ -0.64
CDC7-204ENST00000486509 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
CDC7-204ENST00000486509 PKD2Q13563 968 aa11.02□□□□□ -0.65
CDC7-204ENST00000486509 PYGBP11216 843 aa11.01□□□□□ -0.65
CDC7-204ENST00000486509 KIF12Q96FN5 646 aa11.01□□□□□ -0.65
CDC7-204ENST00000486509 MAP3K13O43283 966 aa10.98□□□□□ -0.65
CDC7-204ENST00000486509 GABBR2O75899 941 aa10.98□□□□□ -0.65
CDC7-204ENST00000486509 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
CDC7-204ENST00000486509 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
CDC7-204ENST00000486509 GALR2O43603 387 aaPredicted RBP10.94□□□□□ -0.66
CDC7-204ENST00000486509 CLCN6P51797 869 aa10.94□□□□□ -0.66
CDC7-204ENST00000486509 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
CDC7-204ENST00000486509 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
CDC7-204ENST00000486509 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
CDC7-204ENST00000486509 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
CDC7-204ENST00000486509 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
CDC7-204ENST00000486509 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
CDC7-204ENST00000486509 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
CDC7-204ENST00000486509 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
CDC7-204ENST00000486509 PCDHB8Q9UN66 801 aa10.88□□□□□ -0.67
CDC7-204ENST00000486509 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
CDC7-204ENST00000486509 RGL2O15211 777 aa10.85□□□□□ -0.67
CDC7-204ENST00000486509 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
CDC7-204ENST00000486509 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
CDC7-204ENST00000486509 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
CDC7-204ENST00000486509 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
CDC7-204ENST00000486509 TIE1P35590 1138 aa10.77□□□□□ -0.69
CDC7-204ENST00000486509 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
CDC7-204ENST00000486509 ATMINO43313 823 aaPredicted RBP10.75□□□□□ -0.69
CDC7-204ENST00000486509 PSEN1P49768 467 aa10.75□□□□□ -0.69
CDC7-204ENST00000486509 PDAP1Q13442 181 aaKnown RBP10.75□□□□□ -0.69
CDC7-204ENST00000486509 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
CDC7-204ENST00000486509 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
CDC7-204ENST00000486509 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
CDC7-204ENST00000486509 VGFO15240 615 aaPredicted RBP10.74□□□□□ -0.69
CDC7-204ENST00000486509 TMEM106CQ9BVX2 250 aa10.73□□□□□ -0.69
CDC7-204ENST00000486509 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
CDC7-204ENST00000486509 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.71□□□□□ -0.69
CDC7-204ENST00000486509 PELP1Q8IZL8 1130 aaKnown RBP10.71□□□□□ -0.69
CDC7-204ENST00000486509 ZFP91Q96JP5 570 aaPredicted RBP10.71□□□□□ -0.69
CDC7-204ENST00000486509 LHX8Q68G74 356 aa10.66□□□□□ -0.7
CDC7-204ENST00000486509 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
CDC7-204ENST00000486509 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
CDC7-204ENST00000486509 BCL11BQ9C0K0 894 aaPredicted RBP10.63□□□□□ -0.71
CDC7-204ENST00000486509 STK25O00506 426 aa10.62□□□□□ -0.71
CDC7-204ENST00000486509 DCAF8L2P0C7V8 631 aa10.61□□□□□ -0.71
CDC7-204ENST00000486509 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
CDC7-204ENST00000486509 HS6ST3Q8IZP7 471 aa10.6□□□□□ -0.71
CDC7-204ENST00000486509 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
CDC7-204ENST00000486509 CHGAP10645 457 aaKnown RBP10.59□□□□□ -0.71
CDC7-204ENST00000486509 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
CDC7-204ENST00000486509 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
CDC7-204ENST00000486509 METRNQ9UJH8 293 aa10.56□□□□□ -0.72
CDC7-204ENST00000486509 POTEFA5A3E0 1075 aa10.55□□□□□ -0.72
CDC7-204ENST00000486509 C7P10643 843 aa10.55□□□□□ -0.72
CDC7-204ENST00000486509 GOLGA2Q08379 1002 aa10.55□□□□□ -0.72
CDC7-204ENST00000486509 IER5LQ5T953 404 aa10.55□□□□□ -0.72
CDC7-204ENST00000486509 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
CDC7-204ENST00000486509 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
CDC7-204ENST00000486509 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
CDC7-204ENST00000486509 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
CDC7-204ENST00000486509 DNAJC5Q9H3Z4 198 aa10.51□□□□□ -0.73
CDC7-204ENST00000486509 NKX1-1Q15270 411 aaPredicted RBP10.49□□□□□ -0.73
CDC7-204ENST00000486509 SOX12O15370 315 aa10.48□□□□□ -0.73
CDC7-204ENST00000486509 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
CDC7-204ENST00000486509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.48□□□□□ -0.73
CDC7-204ENST00000486509 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
CDC7-204ENST00000486509 OCEL1Q9H607 264 aa10.47□□□□□ -0.73
CDC7-204ENST00000486509 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
CDC7-204ENST00000486509 POTEB2H3BUK9 544 aa10.46□□□□□ -0.73
CDC7-204ENST00000486509 SEC24BO95487 1268 aa10.46□□□□□ -0.73
CDC7-204ENST00000486509 PLCG2P16885 1265 aa10.45□□□□□ -0.74
CDC7-204ENST00000486509 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
CDC7-204ENST00000486509 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
CDC7-204ENST00000486509 NLRP6P59044 892 aa10.42□□□□□ -0.74
CDC7-204ENST00000486509 DPY19L2Q6NUT2 758 aa10.42□□□□□ -0.74
CDC7-204ENST00000486509 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
CDC7-204ENST00000486509 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
CDC7-204ENST00000486509 GTPBP6O43824 516 aaPredicted RBP10.37□□□□□ -0.75
CDC7-204ENST00000486509 PPP1R37O75864 691 aa10.34□□□□□ -0.75
CDC7-204ENST00000486509 L3MBTL3Q96JM7 780 aaPredicted RBP10.31□□□□□ -0.76
CDC7-204ENST00000486509 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
CDC7-204ENST00000486509 BOLA1Q9Y3E2 137 aa10.3□□□□□ -0.76
CDC7-204ENST00000486509 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
CDC7-204ENST00000486509 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
CDC7-204ENST00000486509 MICALL2Q8IY33 904 aa10.28□□□□□ -0.76
CDC7-204ENST00000486509 OTUD5Q96G74 571 aa10.28□□□□□ -0.76
CDC7-204ENST00000486509 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
CDC7-204ENST00000486509 SPRYD3Q8NCJ5 442 aa10.26□□□□□ -0.77
CDC7-204ENST00000486509 CFAP44Q96MT7 982 aa10.24□□□□□ -0.77
CDC7-204ENST00000486509 MAMSTRQ6ZN01 415 aa10.23□□□□□ -0.77
CDC7-204ENST00000486509 G3V3G9 751 aa10.22□□□□□ -0.77
CDC7-204ENST00000486509 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
CDC7-204ENST00000486509 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
CDC7-204ENST00000486509 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
CDC7-204ENST00000486509 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.19□□□□□ -0.78
CDC7-204ENST00000486509 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms