RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 CUX1P39880 1505 aa11.35□□□□□ -0.59
PDZD11-204ENST00000486461 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
PDZD11-204ENST00000486461 LMTK3Q96Q04 1460 aa11.32□□□□□ -0.6
PDZD11-204ENST00000486461 ABCA5Q8WWZ7 1642 aa11.31□□□□□ -0.6
PDZD11-204ENST00000486461 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
PDZD11-204ENST00000486461 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
PDZD11-204ENST00000486461 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
PDZD11-204ENST00000486461 ADCY10Q96PN6 1610 aa11.25□□□□□ -0.61
PDZD11-204ENST00000486461 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
PDZD11-204ENST00000486461 SOCS7O14512 581 aa11.23□□□□□ -0.61
PDZD11-204ENST00000486461 PPRC1Q5VV67 1664 aaKnown RBP11.17□□□□□ -0.62
PDZD11-204ENST00000486461 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
PDZD11-204ENST00000486461 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
PDZD11-204ENST00000486461 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
PDZD11-204ENST00000486461 WRNQ14191 1432 aaPredicted RBP eCLIP11.15□□□□□ -0.62
PDZD11-204ENST00000486461 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.63
PDZD11-204ENST00000486461 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
PDZD11-204ENST00000486461 GLI2P10070 1586 aa11.14□□□□□ -0.63
PDZD11-204ENST00000486461 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
PDZD11-204ENST00000486461 PLB1Q6P1J6 1458 aa11.12□□□□□ -0.63
PDZD11-204ENST00000486461 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
PDZD11-204ENST00000486461 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
PDZD11-204ENST00000486461 ABCC2Q92887 1545 aa11.08□□□□□ -0.64
PDZD11-204ENST00000486461 PTPRGP23470 1445 aa11.08□□□□□ -0.64
PDZD11-204ENST00000486461 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
PDZD11-204ENST00000486461 MAP3K4Q9Y6R4 1608 aa11.05□□□□□ -0.64
PDZD11-204ENST00000486461 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
PDZD11-204ENST00000486461 CUL7Q14999 1698 aa11.03□□□□□ -0.64
PDZD11-204ENST00000486461 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
PDZD11-204ENST00000486461 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
PDZD11-204ENST00000486461 KIF21BO75037 1637 aa11□□□□□ -0.65
PDZD11-204ENST00000486461 PTPRMP28827 1452 aa11□□□□□ -0.65
PDZD11-204ENST00000486461 PCF11O94913 1555 aaKnown RBP10.99□□□□□ -0.65
PDZD11-204ENST00000486461 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
PDZD11-204ENST00000486461 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
PDZD11-204ENST00000486461 UHRF1BP1LA0JNW5 1464 aa10.98□□□□□ -0.65
PDZD11-204ENST00000486461 CARMIL2Q6F5E8 1435 aa10.97□□□□□ -0.65
PDZD11-204ENST00000486461 SPATA31D1Q6ZQQ2 1576 aa10.97□□□□□ -0.65
PDZD11-204ENST00000486461 UACAQ9BZF9 1416 aa10.96□□□□□ -0.65
PDZD11-204ENST00000486461 ADAMTSL3P82987 1691 aa10.95□□□□□ -0.66
PDZD11-204ENST00000486461 KDM5BQ9UGL1 1544 aa10.94□□□□□ -0.66
PDZD11-204ENST00000486461 CD109Q6YHK3 1445 aa10.92□□□□□ -0.66
PDZD11-204ENST00000486461 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
PDZD11-204ENST00000486461 HSPA2P54652 639 aa10.91□□□□□ -0.66
PDZD11-204ENST00000486461 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
PDZD11-204ENST00000486461 WDR7Q9Y4E6 1490 aa10.89□□□□□ -0.67
PDZD11-204ENST00000486461 CFAP43Q8NDM7 1665 aa10.88□□□□□ -0.67
PDZD11-204ENST00000486461 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
PDZD11-204ENST00000486461 ARID4BQ4LE39 1312 aaPredicted RBP10.86□□□□□ -0.67
PDZD11-204ENST00000486461 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
PDZD11-204ENST00000486461 IGF1RP08069 1367 aa10.86□□□□□ -0.67
PDZD11-204ENST00000486461 BCORL1Q5H9F3 1711 aa10.86□□□□□ -0.67
PDZD11-204ENST00000486461 ARAP3Q8WWN8 1544 aa10.84□□□□□ -0.67
PDZD11-204ENST00000486461 IQGAP2Q13576 1575 aa10.84□□□□□ -0.67
PDZD11-204ENST00000486461 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
PDZD11-204ENST00000486461 DISP1Q96F81 1524 aa10.82□□□□□ -0.68
PDZD11-204ENST00000486461 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
PDZD11-204ENST00000486461 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
PDZD11-204ENST00000486461 CARMIL1Q5VZK9 1371 aa10.78□□□□□ -0.68
PDZD11-204ENST00000486461 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
PDZD11-204ENST00000486461 RAPGEF3O95398 923 aa10.78□□□□□ -0.68
PDZD11-204ENST00000486461 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.69
PDZD11-204ENST00000486461 KIAA0556O60303 1618 aa10.74□□□□□ -0.69
PDZD11-204ENST00000486461 YEATS2Q9ULM3 1422 aa10.74□□□□□ -0.69
PDZD11-204ENST00000486461 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
PDZD11-204ENST00000486461 POGZQ7Z3K3 1410 aa10.72□□□□□ -0.69
PDZD11-204ENST00000486461 NEO1Q92859 1461 aa10.7□□□□□ -0.7
PDZD11-204ENST00000486461 ARHGEF40Q8TER5 1519 aa10.69□□□□□ -0.7
PDZD11-204ENST00000486461 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
PDZD11-204ENST00000486461 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
PDZD11-204ENST00000486461 FANCAO15360 1455 aa10.68□□□□□ -0.7
PDZD11-204ENST00000486461 PREX1Q8TCU6 1659 aa10.68□□□□□ -0.7
PDZD11-204ENST00000486461 ABCA8O94911 1581 aa10.68□□□□□ -0.7
PDZD11-204ENST00000486461 ABCA9Q8IUA7 1624 aa10.67□□□□□ -0.7
PDZD11-204ENST00000486461 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
PDZD11-204ENST00000486461 MLECQ14165 292 aa10.66□□□□□ -0.7
PDZD11-204ENST00000486461 FER1L4A9Z1Z3 1794 aa10.66□□□□□ -0.7
PDZD11-204ENST00000486461 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.7
PDZD11-204ENST00000486461 PTPRTO14522 1441 aa10.65□□□□□ -0.7
PDZD11-204ENST00000486461 AKNAQ7Z591 1439 aa10.65□□□□□ -0.7
PDZD11-204ENST00000486461 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
PDZD11-204ENST00000486461 SUPT5HO00267 1087 aaKnown RBP10.64□□□□□ -0.71
PDZD11-204ENST00000486461 DENND4BO75064 1496 aaPredicted RBP10.63□□□□□ -0.71
PDZD11-204ENST00000486461 LTBP4Q8N2S1 1624 aa10.63□□□□□ -0.71
PDZD11-204ENST00000486461 SETD1BQ9UPS6 1966 aaKnown RBP10.63□□□□□ -0.71
PDZD11-204ENST00000486461 GOLGA3Q08378 1498 aa10.62□□□□□ -0.71
PDZD11-204ENST00000486461 UHRF1BP1Q6BDS2 1440 aa10.61□□□□□ -0.71
PDZD11-204ENST00000486461 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
PDZD11-204ENST00000486461 CEBPAP49715 358 aaPredicted RBP10.61□□□□□ -0.71
PDZD11-204ENST00000486461 FAM9AQ8IZU1 332 aaPredicted RBP10.61□□□□□ -0.71
PDZD11-204ENST00000486461 RICTORQ6R327 1708 aa10.61□□□□□ -0.71
PDZD11-204ENST00000486461 RAPGEF2Q9Y4G8 1499 aa10.61□□□□□ -0.71
PDZD11-204ENST00000486461 SIGLEC1Q9BZZ2 1709 aa10.6□□□□□ -0.71
PDZD11-204ENST00000486461 ATP10BO94823 1461 aa10.6□□□□□ -0.71
PDZD11-204ENST00000486461 FHOD3Q2V2M9 1422 aa10.59□□□□□ -0.71
PDZD11-204ENST00000486461 EFCAB5A4FU69 1503 aa10.59□□□□□ -0.71
PDZD11-204ENST00000486461 ZFYVE16Q7Z3T8 1539 aa10.59□□□□□ -0.71
PDZD11-204ENST00000486461 MED1Q15648 1581 aaPredicted RBP10.59□□□□□ -0.71
PDZD11-204ENST00000486461 PHF23Q9BUL5 403 aaPredicted RBP10.57□□□□□ -0.72
PDZD11-204ENST00000486461 ZMYM4Q5VZL5 1548 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms