RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ATMINO43313 823 aaPredicted RBP9.75□□□□□ -0.85
PRPF38B-205ENST00000485810 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
PRPF38B-205ENST00000485810 POTEJP0CG39 1038 aa9.73□□□□□ -0.85
PRPF38B-205ENST00000485810 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
PRPF38B-205ENST00000485810 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
PRPF38B-205ENST00000485810 TRPC6Q9Y210 931 aa9.7□□□□□ -0.86
PRPF38B-205ENST00000485810 MIER1Q8N108 512 aa9.68□□□□□ -0.86
PRPF38B-205ENST00000485810 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
PRPF38B-205ENST00000485810 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
PRPF38B-205ENST00000485810 MAP3K13O43283 966 aa9.65□□□□□ -0.86
PRPF38B-205ENST00000485810 POTEFA5A3E0 1075 aa9.64□□□□□ -0.87
PRPF38B-205ENST00000485810 C7P10643 843 aa9.63□□□□□ -0.87
PRPF38B-205ENST00000485810 SLC39A7Q92504 469 aa9.63□□□□□ -0.87
PRPF38B-205ENST00000485810 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
PRPF38B-205ENST00000485810 NUBP1P53384 320 aa9.61□□□□□ -0.87
PRPF38B-205ENST00000485810 FKBP8Q14318 412 aa9.57□□□□□ -0.88
PRPF38B-205ENST00000485810 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
PRPF38B-205ENST00000485810 PLEKHG5O94827 1062 aa9.56□□□□□ -0.88
PRPF38B-205ENST00000485810 TIE1P35590 1138 aa9.55□□□□□ -0.88
PRPF38B-205ENST00000485810 TTLL13PA6NNM8 815 aa9.53□□□□□ -0.88
PRPF38B-205ENST00000485810 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
PRPF38B-205ENST00000485810 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.88
PRPF38B-205ENST00000485810 POTEMA6NI47 508 aa9.5□□□□□ -0.89
PRPF38B-205ENST00000485810 POTEGQ6S5H5 508 aa9.49□□□□□ -0.89
PRPF38B-205ENST00000485810 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
PRPF38B-205ENST00000485810 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
PRPF38B-205ENST00000485810 PCDHB13Q9Y5F0 798 aa9.48□□□□□ -0.89
PRPF38B-205ENST00000485810 MAMSTRQ6ZN01 415 aa9.47□□□□□ -0.89
PRPF38B-205ENST00000485810 TRIM35Q9UPQ4 493 aa9.45□□□□□ -0.9
PRPF38B-205ENST00000485810 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
PRPF38B-205ENST00000485810 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
PRPF38B-205ENST00000485810 SCUBE2Q9NQ36 999 aa9.41□□□□□ -0.9
PRPF38B-205ENST00000485810 IER5LQ5T953 404 aa9.4□□□□□ -0.9
PRPF38B-205ENST00000485810 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
PRPF38B-205ENST00000485810 TMEM106CQ9BVX2 250 aa9.38□□□□□ -0.91
PRPF38B-205ENST00000485810 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
PRPF38B-205ENST00000485810 SEC24BO95487 1268 aa9.37□□□□□ -0.91
PRPF38B-205ENST00000485810 PYGBP11216 843 aa9.37□□□□□ -0.91
PRPF38B-205ENST00000485810 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
PRPF38B-205ENST00000485810 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
PRPF38B-205ENST00000485810 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
PRPF38B-205ENST00000485810 FBXO3Q9UK99 471 aa9.31□□□□□ -0.92
PRPF38B-205ENST00000485810 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
PRPF38B-205ENST00000485810 PLCG2P16885 1265 aa9.25□□□□□ -0.93
PRPF38B-205ENST00000485810 SLAIN1Q8ND83 568 aa9.25□□□□□ -0.93
PRPF38B-205ENST00000485810 OCEL1Q9H607 264 aa9.24□□□□□ -0.93
PRPF38B-205ENST00000485810 ST18O60284 1047 aa9.22□□□□□ -0.93
PRPF38B-205ENST00000485810 KLHL34Q8N239 644 aa9.22□□□□□ -0.93
PRPF38B-205ENST00000485810 CHRM1P11229 460 aaPredicted RBP9.21□□□□□ -0.94
PRPF38B-205ENST00000485810 GSE1Q14687 1217 aa9.2□□□□□ -0.94
PRPF38B-205ENST00000485810 PDCD7Q8N8D1 485 aaKnown RBP9.2□□□□□ -0.94
PRPF38B-205ENST00000485810 IFNLR1Q8IU57 520 aaPredicted RBP9.18□□□□□ -0.94
PRPF38B-205ENST00000485810 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
PRPF38B-205ENST00000485810 CDAN1Q8IWY9 1227 aa9.16□□□□□ -0.94
PRPF38B-205ENST00000485810 PSEN1P49768 467 aa9.14□□□□□ -0.95
PRPF38B-205ENST00000485810 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
PRPF38B-205ENST00000485810 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
PRPF38B-205ENST00000485810 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
PRPF38B-205ENST00000485810 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
PRPF38B-205ENST00000485810 MKRN3Q13064 507 aaKnown RBP9.08□□□□□ -0.96
PRPF38B-205ENST00000485810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.08□□□□□ -0.968e-9■■■□□ 18.4
PRPF38B-205ENST00000485810 PDAP1Q13442 181 aaKnown RBP9.06□□□□□ -0.96
PRPF38B-205ENST00000485810 MARVELD3Q96A59 401 aa9.05□□□□□ -0.96
PRPF38B-205ENST00000485810 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
PRPF38B-205ENST00000485810 TMEM121BQ9BXQ6 578 aaPredicted RBP9.04□□□□□ -0.96
PRPF38B-205ENST00000485810 GOLGA2Q08379 1002 aa9.03□□□□□ -0.96
PRPF38B-205ENST00000485810 L3MBTL3Q96JM7 780 aaPredicted RBP9.03□□□□□ -0.96
PRPF38B-205ENST00000485810 SNPHO15079 494 aa9.02□□□□□ -0.97
PRPF38B-205ENST00000485810 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
PRPF38B-205ENST00000485810 POTEB3A0JP26 581 aa9.01□□□□□ -0.97
PRPF38B-205ENST00000485810 POTEBQ6S5H4 581 aa9.01□□□□□ -0.97
PRPF38B-205ENST00000485810 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
PRPF38B-205ENST00000485810 SPNS2Q8IVW8 549 aa8.98□□□□□ -0.97
PRPF38B-205ENST00000485810 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
PRPF38B-205ENST00000485810 MMRN1Q13201 1228 aa8.95□□□□□ -0.98
PRPF38B-205ENST00000485810 EFCAB3Q8N7B9 438 aa8.94□□□□□ -0.98
PRPF38B-205ENST00000485810 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
PRPF38B-205ENST00000485810 RNF25Q96BH1 459 aaPredicted RBP8.92□□□□□ -0.98
PRPF38B-205ENST00000485810 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
PRPF38B-205ENST00000485810 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
PRPF38B-205ENST00000485810 EMP3P54852 163 aa8.91□□□□□ -0.98
PRPF38B-205ENST00000485810 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.98
PRPF38B-205ENST00000485810 FAM205CA6NFA0 338 aa8.88□□□□□ -0.99
PRPF38B-205ENST00000485810 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
PRPF38B-205ENST00000485810 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
PRPF38B-205ENST00000485810 MS4A4AQ96JQ5 239 aa8.87□□□□□ -0.99
PRPF38B-205ENST00000485810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.84□□□□□ -0.99
PRPF38B-205ENST00000485810 ZFP91Q96JP5 570 aaPredicted RBP8.84□□□□□ -0.99
PRPF38B-205ENST00000485810 RIOK3O14730 519 aaKnown RBP8.83□□□□□ -1
PRPF38B-205ENST00000485810 HOXB1P14653 301 aaPredicted RBP8.83□□□□□ -1
PRPF38B-205ENST00000485810 MICALL2Q8IY33 904 aa8.83□□□□□ -1
PRPF38B-205ENST00000485810 G3V3G9 751 aa8.82□□□□□ -1
PRPF38B-205ENST00000485810 PHF8Q9UPP1 1060 aa8.81□□□□□ -1
PRPF38B-205ENST00000485810 SOX12O15370 315 aa8.79□□□□□ -1
PRPF38B-205ENST00000485810 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1.01
PRPF38B-205ENST00000485810 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
PRPF38B-205ENST00000485810 ZNF710Q8N1W2 664 aa8.75□□□□□ -1.01
PRPF38B-205ENST00000485810 FBXO22Q8NEZ5 403 aa8.75□□□□□ -1.01
PRPF38B-205ENST00000485810 GPR153Q6NV75 609 aa8.74□□□□□ -1.01
PRPF38B-205ENST00000485810 ERBB3P21860 1342 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms