RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 ERCC6L2Q5T890 1561 aa35.78■■■■□ 3.32
NECAB3-211ENST00000485399 FHAD1B1AJZ9 1412 aa35.76■■■■□ 3.31
NECAB3-211ENST00000485399 CUL7Q14999 1698 aa35.76■■■■□ 3.31
NECAB3-211ENST00000485399 CARMIL1Q5VZK9 1371 aa35.7■■■■□ 3.31
NECAB3-211ENST00000485399 SHROOM2Q13796 1616 aa35.69■■■■□ 3.3
NECAB3-211ENST00000485399 PRXQ9BXM0 1461 aa35.68■■■■□ 3.3
NECAB3-211ENST00000485399 KIF21BO75037 1637 aa35.64■■■■□ 3.3
NECAB3-211ENST00000485399 RAPGEF2Q9Y4G8 1499 aa35.6■■■■□ 3.29
NECAB3-211ENST00000485399 GOLGA3Q08378 1498 aa35.51■■■■□ 3.27
NECAB3-211ENST00000485399 EHMT2Q96KQ7 1210 aa35.44■■■■□ 3.26
NECAB3-211ENST00000485399 LOC105371045A0A1W2PR82 267 aa35.41■■■■□ 3.26
NECAB3-211ENST00000485399 PRG4Q92954 1404 aaPredicted RBP35.41■■■■□ 3.26
NECAB3-211ENST00000485399 JPH4Q96JJ6 628 aa35.37■■■■□ 3.25
NECAB3-211ENST00000485399 UBTFP17480 764 aaKnown RBP35.36■■■■□ 3.25
NECAB3-211ENST00000485399 TNIKQ9UKE5 1360 aa35.24■■■■□ 3.23
NECAB3-211ENST00000485399 KIF13AQ9H1H9 1805 aa35.24■■■■□ 3.23
NECAB3-211ENST00000485399 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
NECAB3-211ENST00000485399 KIAA0586Q9BVV6 1533 aa35.17■■■■□ 3.22
NECAB3-211ENST00000485399 ADCY10Q96PN6 1610 aa35.09■■■■□ 3.21
NECAB3-211ENST00000485399 IQGAP2Q13576 1575 aa35.07■■■■□ 3.2
NECAB3-211ENST00000485399 MAPKBP1O60336 1514 aa35.04■■■■□ 3.2
NECAB3-211ENST00000485399 ABCC10Q5T3U5 1492 aa35.01■■■■□ 3.2
NECAB3-211ENST00000485399 DIP2BQ9P265 1576 aa34.95■■■■□ 3.19
NECAB3-211ENST00000485399 CEP162Q5TB80 1403 aa34.95■■■■□ 3.18
NECAB3-211ENST00000485399 NPM1P06748 294 aaKnown RBP eCLIP34.93■■■■□ 3.18
NECAB3-211ENST00000485399 AEBP2Q6ZN18 517 aaPredicted RBP34.92■■■■□ 3.18
NECAB3-211ENST00000485399 RANGAP1P46060 587 aaPredicted RBP34.91■■■■□ 3.18
NECAB3-211ENST00000485399 FAM69CQ0P6D2 419 aa34.9■■■■□ 3.18
NECAB3-211ENST00000485399 UGGT2Q9NYU1 1516 aa34.9■■■■□ 3.18
NECAB3-211ENST00000485399 CLIP1P30622 1438 aa34.89■■■■□ 3.18
NECAB3-211ENST00000485399 EFCAB5A4FU69 1503 aa34.83■■■■□ 3.17
NECAB3-211ENST00000485399 PTPRGP23470 1445 aa34.83■■■■□ 3.17
NECAB3-211ENST00000485399 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
NECAB3-211ENST00000485399 CARMIL2Q6F5E8 1435 aa34.77■■■■□ 3.16
NECAB3-211ENST00000485399 ARHGAP35Q9NRY4 1499 aa34.77■■■■□ 3.16
NECAB3-211ENST00000485399 DISP1Q96F81 1524 aa34.73■■■■□ 3.15
NECAB3-211ENST00000485399 KIAA0556O60303 1618 aa34.71■■■■□ 3.15
NECAB3-211ENST00000485399 ABCC2Q92887 1545 aa34.7■■■■□ 3.15
NECAB3-211ENST00000485399 P3H3Q8IVL6 736 aa34.68■■■■□ 3.14
NECAB3-211ENST00000485399 TSPOAP1O95153 1857 aa34.67■■■■□ 3.14
NECAB3-211ENST00000485399 TTBK1Q5TCY1 1321 aaPredicted RBP34.67■■■■□ 3.14
NECAB3-211ENST00000485399 UHRF1BP1LA0JNW5 1464 aa34.64■■■■□ 3.14
NECAB3-211ENST00000485399 KDM6BO15054 1643 aa34.63■■■■□ 3.13
NECAB3-211ENST00000485399 FHOD3Q2V2M9 1422 aa34.62■■■■□ 3.13
NECAB3-211ENST00000485399 ASXL2Q76L83 1435 aa34.58■■■■□ 3.13
NECAB3-211ENST00000485399 UACAQ9BZF9 1416 aa34.58■■■■□ 3.13
NECAB3-211ENST00000485399 PLB1Q6P1J6 1458 aa34.55■■■■□ 3.12
NECAB3-211ENST00000485399 GLI2P10070 1586 aa34.53■■■■□ 3.12
NECAB3-211ENST00000485399 PPRC1Q5VV67 1664 aaKnown RBP34.52■■■■□ 3.12
NECAB3-211ENST00000485399 FMN1Q68DA7 1419 aa34.51■■■■□ 3.11
NECAB3-211ENST00000485399 KDM5BQ9UGL1 1544 aa34.5■■■■□ 3.11
NECAB3-211ENST00000485399 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
NECAB3-211ENST00000485399 ZCCHC11Q5TAX3 1644 aaKnown RBP34.43■■■■□ 3.1
NECAB3-211ENST00000485399 EPRSP07814 1512 aaKnown RBP34.39■■■■□ 3.1
NECAB3-211ENST00000485399 MAP3K4Q9Y6R4 1608 aa34.36■■■■□ 3.09
NECAB3-211ENST00000485399 CASKIN1Q8WXD9 1431 aa34.32■■■■□ 3.09
NECAB3-211ENST00000485399 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
NECAB3-211ENST00000485399 PCF11O94913 1555 aaKnown RBP34.3■■■■□ 3.08
NECAB3-211ENST00000485399 FYCO1Q9BQS8 1478 aa34.29■■■■□ 3.08
NECAB3-211ENST00000485399 RAPGEF6Q8TEU7 1601 aa34.29■■■■□ 3.08
NECAB3-211ENST00000485399 ABCA8O94911 1581 aa34.27■■■■□ 3.08
NECAB3-211ENST00000485399 COL17A1Q9UMD9 1497 aaPredicted RBP34.25■■■■□ 3.07
NECAB3-211ENST00000485399 WDR7Q9Y4E6 1490 aa34.23■■■■□ 3.07
NECAB3-211ENST00000485399 HECW1Q76N89 1606 aa34.23■■■■□ 3.07
NECAB3-211ENST00000485399 ATP1B4Q9UN42 357 aaPredicted RBP34.23■■■■□ 3.07
NECAB3-211ENST00000485399 TEX14Q8IWB6 1497 aa34.19■■■■□ 3.06
NECAB3-211ENST00000485399 APLP2Q06481 763 aa34.14■■■■□ 3.06
NECAB3-211ENST00000485399 NUP153P49790 1475 aaKnown RBP34.14■■■■□ 3.06
NECAB3-211ENST00000485399 CCDC18Q5T9S5 1454 aa34.1■■■■□ 3.05
NECAB3-211ENST00000485399 LRRIQ1Q96JM4 1722 aa34.09■■■■□ 3.05
NECAB3-211ENST00000485399 MAP3K1Q13233 1512 aa34.07■■■■□ 3.05
NECAB3-211ENST00000485399 CFAP43Q8NDM7 1665 aa34.07■■■■□ 3.04
NECAB3-211ENST00000485399 MAGI3Q5TCQ9 1506 aa34.03■■■■□ 3.04
NECAB3-211ENST00000485399 ADGRL1O94910 1474 aa34.03■■■■□ 3.04
NECAB3-211ENST00000485399 TIAM1Q13009 1591 aa34.02■■■■□ 3.04
NECAB3-211ENST00000485399 ATP10BO94823 1461 aa34.01■■■■□ 3.03
NECAB3-211ENST00000485399 CD109Q6YHK3 1445 aa34.01■■■■□ 3.03
NECAB3-211ENST00000485399 ARID3CA6NKF2 412 aa34■■■■□ 3.03
NECAB3-211ENST00000485399 CDK13Q14004 1512 aaKnown RBP34■■■■□ 3.03
NECAB3-211ENST00000485399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.98■■■■□ 3.03
NECAB3-211ENST00000485399 HNRNPUL2Q1KMD3 747 aaKnown RBP33.98■■■■□ 3.03
NECAB3-211ENST00000485399 KCNH8Q96L42 1107 aa33.97■■■■□ 3.03
NECAB3-211ENST00000485399 CDK11AQ9UQ88 783 aaPredicted RBP33.93■■■■□ 3.02
NECAB3-211ENST00000485399 LRRC9Q6ZRR7 1453 aa33.87■■■■□ 3.01
NECAB3-211ENST00000485399 KANK4Q5T7N3 995 aaPredicted RBP33.85■■■■□ 3.01
NECAB3-211ENST00000485399 MTUS2Q5JR59 1369 aa33.84■■■■□ 3.01
NECAB3-211ENST00000485399 PLEKHD1A6NEE1 506 aa33.84■■■■□ 3.01
NECAB3-211ENST00000485399 ABCA9Q8IUA7 1624 aa33.8■■■■□ 3
NECAB3-211ENST00000485399 EHBP1L1Q8N3D4 1523 aa33.8■■■■□ 3
NECAB3-211ENST00000485399 PPARGC1BQ86YN6 1023 aaKnown RBP33.78■■■■□ 3
NECAB3-211ENST00000485399 ARAP3Q8WWN8 1544 aa33.77■■■■□ 3
NECAB3-211ENST00000485399 TROQ12816 1431 aaPredicted RBP33.77■■■■□ 3
NECAB3-211ENST00000485399 SUPT6HQ7KZ85 1726 aaKnown RBP33.69■■■□□ 2.98
NECAB3-211ENST00000485399 KIF14Q15058 1648 aa33.63■■■□□ 2.97
NECAB3-211ENST00000485399 PHLDB1Q86UU1 1377 aa33.63■■■□□ 2.97
NECAB3-211ENST00000485399 HECW2Q9P2P5 1572 aa33.61■■■□□ 2.97
NECAB3-211ENST00000485399 NEO1Q92859 1461 aa33.6■■■□□ 2.97
NECAB3-211ENST00000485399 NCOA2Q15596 1464 aa33.59■■■□□ 2.97
NECAB3-211ENST00000485399 FRMPD1Q5SYB0 1578 aa33.55■■■□□ 2.96
NECAB3-211ENST00000485399 RAPGEF3O95398 923 aa33.51■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms