RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
CDK13-205ENST00000484589 UBTFP17480 764 aaKnown RBP13.91□□□□□ -0.18
CDK13-205ENST00000484589 NUP160Q12769 1436 aa13.89□□□□□ -0.19
CDK13-205ENST00000484589 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
CDK13-205ENST00000484589 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
CDK13-205ENST00000484589 KIAA0586Q9BVV6 1533 aa13.83□□□□□ -0.2
CDK13-205ENST00000484589 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
CDK13-205ENST00000484589 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
CDK13-205ENST00000484589 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
CDK13-205ENST00000484589 JPH4Q96JJ6 628 aa13.81□□□□□ -0.2
CDK13-205ENST00000484589 IQGAP2Q13576 1575 aa13.79□□□□□ -0.2
CDK13-205ENST00000484589 TNIKQ9UKE5 1360 aa13.79□□□□□ -0.2
CDK13-205ENST00000484589 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
CDK13-205ENST00000484589 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
CDK13-205ENST00000484589 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
CDK13-205ENST00000484589 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
CDK13-205ENST00000484589 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
CDK13-205ENST00000484589 SHROOM2Q13796 1616 aa13.74□□□□□ -0.21
CDK13-205ENST00000484589 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
CDK13-205ENST00000484589 UGGT2Q9NYU1 1516 aa13.72□□□□□ -0.21
CDK13-205ENST00000484589 TTBK1Q5TCY1 1321 aaPredicted RBP13.71□□□□□ -0.21
CDK13-205ENST00000484589 CEP162Q5TB80 1403 aa13.71□□□□□ -0.22
CDK13-205ENST00000484589 ARHGAP35Q9NRY4 1499 aa13.69□□□□□ -0.22
CDK13-205ENST00000484589 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
CDK13-205ENST00000484589 CLIP1P30622 1438 aa13.68□□□□□ -0.22
CDK13-205ENST00000484589 MYT1Q01538 1121 aa13.68□□□□□ -0.22
CDK13-205ENST00000484589 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
CDK13-205ENST00000484589 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
CDK13-205ENST00000484589 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
CDK13-205ENST00000484589 KIAA0556O60303 1618 aa13.66□□□□□ -0.22
CDK13-205ENST00000484589 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
CDK13-205ENST00000484589 ARAP1Q96P48 1450 aa13.65□□□□□ -0.23
CDK13-205ENST00000484589 RIMBP3CA6NJZ7 1639 aa13.64□□□□□ -0.23
CDK13-205ENST00000484589 RIMBP3BA6NNM3 1639 aa13.64□□□□□ -0.23
CDK13-205ENST00000484589 RIMBP3Q9UFD9 1639 aa13.64□□□□□ -0.23
CDK13-205ENST00000484589 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
CDK13-205ENST00000484589 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
CDK13-205ENST00000484589 PTPRGP23470 1445 aa13.6□□□□□ -0.23
CDK13-205ENST00000484589 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
CDK13-205ENST00000484589 ARID3CA6NKF2 412 aa13.55□□□□□ -0.24
CDK13-205ENST00000484589 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.24
CDK13-205ENST00000484589 FMN1Q68DA7 1419 aa13.51□□□□□ -0.25
CDK13-205ENST00000484589 UACAQ9BZF9 1416 aa13.5□□□□□ -0.25
CDK13-205ENST00000484589 APLP2Q06481 763 aa13.5□□□□□ -0.25
CDK13-205ENST00000484589 ABCA8O94911 1581 aa13.5□□□□□ -0.25
CDK13-205ENST00000484589 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
CDK13-205ENST00000484589 VPS8Q8N3P4 1428 aa13.49□□□□□ -0.25
CDK13-205ENST00000484589 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
CDK13-205ENST00000484589 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
CDK13-205ENST00000484589 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
CDK13-205ENST00000484589 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
CDK13-205ENST00000484589 NUP153P49790 1475 aaKnown RBP13.47□□□□□ -0.25
CDK13-205ENST00000484589 ABCC2Q92887 1545 aa13.46□□□□□ -0.25
CDK13-205ENST00000484589 CASKIN1Q8WXD9 1431 aa13.46□□□□□ -0.25
CDK13-205ENST00000484589 LRRIQ1Q96JM4 1722 aa13.46□□□□□ -0.26
CDK13-205ENST00000484589 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
CDK13-205ENST00000484589 UHRF1BP1LA0JNW5 1464 aa13.43□□□□□ -0.26
CDK13-205ENST00000484589 ATP10BO94823 1461 aa13.43□□□□□ -0.26
CDK13-205ENST00000484589 FYCO1Q9BQS8 1478 aa13.43□□□□□ -0.26
CDK13-205ENST00000484589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
CDK13-205ENST00000484589 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
CDK13-205ENST00000484589 EPRSP07814 1512 aaKnown RBP13.41□□□□□ -0.26
CDK13-205ENST00000484589 KDM5BQ9UGL1 1544 aa13.4□□□□□ -0.26
CDK13-205ENST00000484589 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
CDK13-205ENST00000484589 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
CDK13-205ENST00000484589 PRKCSHP14314 528 aaPredicted RBP13.39□□□□□ -0.27
CDK13-205ENST00000484589 PPARGC1BQ86YN6 1023 aaKnown RBP13.39□□□□□ -0.27
CDK13-205ENST00000484589 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDK13-205ENST00000484589 KANK4Q5T7N3 995 aaPredicted RBP13.37□□□□□ -0.27
CDK13-205ENST00000484589 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
CDK13-205ENST00000484589 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
CDK13-205ENST00000484589 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
CDK13-205ENST00000484589 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
CDK13-205ENST00000484589 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
CDK13-205ENST00000484589 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.28
CDK13-205ENST00000484589 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
CDK13-205ENST00000484589 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
CDK13-205ENST00000484589 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
CDK13-205ENST00000484589 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
CDK13-205ENST00000484589 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
CDK13-205ENST00000484589 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
CDK13-205ENST00000484589 MTUS2Q5JR59 1369 aa13.29□□□□□ -0.28
CDK13-205ENST00000484589 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
CDK13-205ENST00000484589 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
CDK13-205ENST00000484589 KIF14Q15058 1648 aa13.27□□□□□ -0.29
CDK13-205ENST00000484589 ARXQ96QS3 562 aa13.24□□□□□ -0.29
CDK13-205ENST00000484589 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
CDK13-205ENST00000484589 KCNA4P22459 653 aa13.22□□□□□ -0.29
CDK13-205ENST00000484589 EHBP1L1Q8N3D4 1523 aa13.22□□□□□ -0.29
CDK13-205ENST00000484589 ABCC10Q5T3U5 1492 aa13.22□□□□□ -0.29
CDK13-205ENST00000484589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDK13-205ENST00000484589 DIP2BQ9P265 1576 aa13.21□□□□□ -0.29
CDK13-205ENST00000484589 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.3
CDK13-205ENST00000484589 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.3
CDK13-205ENST00000484589 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
CDK13-205ENST00000484589 KIF13AQ9H1H9 1805 aa13.2□□□□□ -0.3
CDK13-205ENST00000484589 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
CDK13-205ENST00000484589 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
CDK13-205ENST00000484589 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
CDK13-205ENST00000484589 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms