RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
CAST-210ENST00000484552 AAMPQ13685 434 aa11.89□□□□□ -0.51
CAST-210ENST00000484552 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
CAST-210ENST00000484552 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
CAST-210ENST00000484552 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
CAST-210ENST00000484552 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAST-210ENST00000484552 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAST-210ENST00000484552 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
CAST-210ENST00000484552 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
CAST-210ENST00000484552 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
CAST-210ENST00000484552 NAP1L5Q96NT1 182 aaPredicted RBP11.82□□□□□ -0.52
CAST-210ENST00000484552 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
CAST-210ENST00000484552 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
CAST-210ENST00000484552 BICRAQ9NZM4 1560 aa11.81□□□□□ -0.52
CAST-210ENST00000484552 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
CAST-210ENST00000484552 NBR1Q14596 966 aa11.79□□□□□ -0.52
CAST-210ENST00000484552 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
CAST-210ENST00000484552 TICAM2Q86XR7 235 aa11.79□□□□□ -0.52
CAST-210ENST00000484552 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
CAST-210ENST00000484552 ARID3AQ99856 593 aa11.74□□□□□ -0.53
CAST-210ENST00000484552 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
CAST-210ENST00000484552 CLSTN1O94985 981 aa11.74□□□□□ -0.53
CAST-210ENST00000484552 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAST-210ENST00000484552 A0A0U1RQG5 324 aaPredicted RBP11.66□□□□□ -0.54
CAST-210ENST00000484552 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
CAST-210ENST00000484552 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
CAST-210ENST00000484552 NECTIN2Q92692 538 aa11.64□□□□□ -0.55
CAST-210ENST00000484552 IRX6P78412 446 aaPredicted RBP11.64□□□□□ -0.55
CAST-210ENST00000484552 GLIPR1L2Q4G1C9 344 aa11.64□□□□□ -0.55
CAST-210ENST00000484552 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
CAST-210ENST00000484552 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
CAST-210ENST00000484552 PSMD1Q99460 953 aa11.62□□□□□ -0.55
CAST-210ENST00000484552 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
CAST-210ENST00000484552 ZFP91Q96JP5 570 aaPredicted RBP11.6□□□□□ -0.55
CAST-210ENST00000484552 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
CAST-210ENST00000484552 POTEHQ6S545 545 aa11.58□□□□□ -0.56
CAST-210ENST00000484552 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
CAST-210ENST00000484552 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
CAST-210ENST00000484552 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
CAST-210ENST00000484552 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
CAST-210ENST00000484552 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
CAST-210ENST00000484552 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
CAST-210ENST00000484552 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
CAST-210ENST00000484552 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
CAST-210ENST00000484552 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
CAST-210ENST00000484552 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
CAST-210ENST00000484552 TSHZ2Q9NRE2 1034 aa11.5□□□□□ -0.57
CAST-210ENST00000484552 TMED8Q6PL24 325 aaPredicted RBP11.49□□□□□ -0.57
CAST-210ENST00000484552 CECR2Q9BXF3 1484 aa11.49□□□□□ -0.57
CAST-210ENST00000484552 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
CAST-210ENST00000484552 TEX2Q8IWB9 1127 aa11.49□□□□□ -0.57
CAST-210ENST00000484552 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
CAST-210ENST00000484552 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
CAST-210ENST00000484552 RAD21O60216 631 aa11.46□□□□□ -0.58
CAST-210ENST00000484552 RGS22Q8NE09 1264 aa11.46□□□□□ -0.58
CAST-210ENST00000484552 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.58
CAST-210ENST00000484552 SETQ01105 290 aaPredicted RBP11.45□□□□□ -0.58
CAST-210ENST00000484552 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
CAST-210ENST00000484552 PLCD4Q9BRC7 762 aa11.44□□□□□ -0.58
CAST-210ENST00000484552 DEKP35659 375 aaKnown RBP11.44□□□□□ -0.58
CAST-210ENST00000484552 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
CAST-210ENST00000484552 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
CAST-210ENST00000484552 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
CAST-210ENST00000484552 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
CAST-210ENST00000484552 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
CAST-210ENST00000484552 PTMSP20962 102 aa11.4□□□□□ -0.58
CAST-210ENST00000484552 C1orf115Q9H7X2 142 aa11.4□□□□□ -0.58
CAST-210ENST00000484552 PRDM16Q9HAZ2 1276 aa11.4□□□□□ -0.58
CAST-210ENST00000484552 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
CAST-210ENST00000484552 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
CAST-210ENST00000484552 PRDM10Q9NQV6 1147 aa11.39□□□□□ -0.59
CAST-210ENST00000484552 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
CAST-210ENST00000484552 IPO4Q8TEX9 1081 aaKnown RBP11.38□□□□□ -0.59
CAST-210ENST00000484552 RBM25P49756 843 aaKnown RBP11.36□□□□□ -0.59
CAST-210ENST00000484552 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
CAST-210ENST00000484552 DNAJC5Q9H3Z4 198 aa11.36□□□□□ -0.59
CAST-210ENST00000484552 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
CAST-210ENST00000484552 MCCP23508 829 aa11.34□□□□□ -0.59
CAST-210ENST00000484552 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
CAST-210ENST00000484552 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
CAST-210ENST00000484552 CCDC27Q2M243 656 aa11.3□□□□□ -0.6
CAST-210ENST00000484552 MAFGO15525 162 aa11.29□□□□□ -0.6
CAST-210ENST00000484552 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
CAST-210ENST00000484552 SECISBP2LQ93073 1101 aaKnown RBP11.29□□□□□ -0.6
CAST-210ENST00000484552 NEFMP07197 916 aa11.28□□□□□ -0.6
CAST-210ENST00000484552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.69e-7■■■□□ 16.4
CAST-210ENST00000484552 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
CAST-210ENST00000484552 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
CAST-210ENST00000484552 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
CAST-210ENST00000484552 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
CAST-210ENST00000484552 ANAPC15P60006 121 aa11.26□□□□□ -0.61
CAST-210ENST00000484552 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
CAST-210ENST00000484552 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
CAST-210ENST00000484552 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
CAST-210ENST00000484552 DNAJC2Q99543 621 aaKnown RBP11.23□□□□□ -0.61
CAST-210ENST00000484552 E9PSI1 815 aa11.21□□□□□ -0.61
CAST-210ENST00000484552 PKD2Q13563 968 aa11.21□□□□□ -0.62
CAST-210ENST00000484552 GPATCH11Q8N954 259 aa11.2□□□□□ -0.62
CAST-210ENST00000484552 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
CAST-210ENST00000484552 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms