RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ABCC10Q5T3U5 1492 aa19.72■□□□□ 0.75
SMARCC1-205ENST00000483847 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
SMARCC1-205ENST00000483847 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
SMARCC1-205ENST00000483847 DIP2BQ9P265 1576 aa19.68■□□□□ 0.74
SMARCC1-205ENST00000483847 MAPKBP1O60336 1514 aa19.67■□□□□ 0.74
SMARCC1-205ENST00000483847 ADCY10Q96PN6 1610 aa19.66■□□□□ 0.74
SMARCC1-205ENST00000483847 NPM1P06748 294 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMARCC1-205ENST00000483847 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
SMARCC1-205ENST00000483847 KDM6BO15054 1643 aa19.6■□□□□ 0.73
SMARCC1-205ENST00000483847 TSPOAP1O95153 1857 aa19.57■□□□□ 0.72
SMARCC1-205ENST00000483847 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.72
SMARCC1-205ENST00000483847 IGF1RP08069 1367 aa19.46■□□□□ 0.71
SMARCC1-205ENST00000483847 CUL7Q14999 1698 aa19.43■□□□□ 0.7
SMARCC1-205ENST00000483847 ILDR1Q86SU0 546 aaPredicted RBP19.43■□□□□ 0.7
SMARCC1-205ENST00000483847 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
SMARCC1-205ENST00000483847 PTPRGP23470 1445 aa19.42■□□□□ 0.7
SMARCC1-205ENST00000483847 PPRC1Q5VV67 1664 aaKnown RBP19.4■□□□□ 0.7
SMARCC1-205ENST00000483847 KIF27Q86VH2 1401 aa19.39■□□□□ 0.69
SMARCC1-205ENST00000483847 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
SMARCC1-205ENST00000483847 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
SMARCC1-205ENST00000483847 GLI2P10070 1586 aa19.35■□□□□ 0.69
SMARCC1-205ENST00000483847 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
SMARCC1-205ENST00000483847 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
SMARCC1-205ENST00000483847 PLB1Q6P1J6 1458 aa19.33■□□□□ 0.68
SMARCC1-205ENST00000483847 CARMIL2Q6F5E8 1435 aa19.32■□□□□ 0.68
SMARCC1-205ENST00000483847 COL17A1Q9UMD9 1497 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-205ENST00000483847 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
SMARCC1-205ENST00000483847 IQGAP2Q13576 1575 aa19.29■□□□□ 0.68
SMARCC1-205ENST00000483847 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
SMARCC1-205ENST00000483847 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
SMARCC1-205ENST00000483847 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
SMARCC1-205ENST00000483847 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
SMARCC1-205ENST00000483847 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
SMARCC1-205ENST00000483847 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
SMARCC1-205ENST00000483847 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
SMARCC1-205ENST00000483847 ZCCHC11Q5TAX3 1644 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-205ENST00000483847 TEX14Q8IWB6 1497 aa19.17■□□□□ 0.66
SMARCC1-205ENST00000483847 UGGT2Q9NYU1 1516 aa19.15■□□□□ 0.66
SMARCC1-205ENST00000483847 KIAA0556O60303 1618 aa19.14■□□□□ 0.65
SMARCC1-205ENST00000483847 WDR7Q9Y4E6 1490 aa19.1■□□□□ 0.65
SMARCC1-205ENST00000483847 RAPGEF2Q9Y4G8 1499 aa19.08■□□□□ 0.64
SMARCC1-205ENST00000483847 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
SMARCC1-205ENST00000483847 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
SMARCC1-205ENST00000483847 CFAP43Q8NDM7 1665 aa19.02■□□□□ 0.64
SMARCC1-205ENST00000483847 CD109Q6YHK3 1445 aa19.02■□□□□ 0.64
SMARCC1-205ENST00000483847 KIF21BO75037 1637 aa19■□□□□ 0.63
SMARCC1-205ENST00000483847 KCNH8Q96L42 1107 aa19■□□□□ 0.63
SMARCC1-205ENST00000483847 ABCA8O94911 1581 aa18.99■□□□□ 0.63
SMARCC1-205ENST00000483847 CTTNBP2Q8WZ74 1663 aa18.98■□□□□ 0.63
SMARCC1-205ENST00000483847 GOLGA3Q08378 1498 aa18.92■□□□□ 0.62
SMARCC1-205ENST00000483847 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
SMARCC1-205ENST00000483847 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
SMARCC1-205ENST00000483847 FBXO41Q8TF61 875 aa18.87■□□□□ 0.61
SMARCC1-205ENST00000483847 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
SMARCC1-205ENST00000483847 PTPRMP28827 1452 aa18.84■□□□□ 0.61
SMARCC1-205ENST00000483847 ATP10BO94823 1461 aa18.83■□□□□ 0.6
SMARCC1-205ENST00000483847 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
SMARCC1-205ENST00000483847 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
SMARCC1-205ENST00000483847 RAPGEF3O95398 923 aa18.8■□□□□ 0.6
SMARCC1-205ENST00000483847 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
SMARCC1-205ENST00000483847 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
SMARCC1-205ENST00000483847 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
SMARCC1-205ENST00000483847 BCORL1Q5H9F3 1711 aa18.76■□□□□ 0.59
SMARCC1-205ENST00000483847 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
SMARCC1-205ENST00000483847 PCF11O94913 1555 aaKnown RBP18.74■□□□□ 0.59
SMARCC1-205ENST00000483847 NEO1Q92859 1461 aa18.73■□□□□ 0.59
SMARCC1-205ENST00000483847 LMTK3Q96Q04 1460 aa18.72■□□□□ 0.59
SMARCC1-205ENST00000483847 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
SMARCC1-205ENST00000483847 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
SMARCC1-205ENST00000483847 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
SMARCC1-205ENST00000483847 RIMS1Q86UR5 1692 aaKnown RBP18.68■□□□□ 0.58
SMARCC1-205ENST00000483847 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-205ENST00000483847 ARHGEF40Q8TER5 1519 aa18.65■□□□□ 0.58
SMARCC1-205ENST00000483847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
SMARCC1-205ENST00000483847 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
SMARCC1-205ENST00000483847 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
SMARCC1-205ENST00000483847 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
SMARCC1-205ENST00000483847 HSPA2P54652 639 aa18.63■□□□□ 0.57
SMARCC1-205ENST00000483847 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
SMARCC1-205ENST00000483847 DENND4BO75064 1496 aaPredicted RBP18.6■□□□□ 0.57
SMARCC1-205ENST00000483847 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
SMARCC1-205ENST00000483847 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
SMARCC1-205ENST00000483847 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
SMARCC1-205ENST00000483847 FANCAO15360 1455 aa18.56■□□□□ 0.56
SMARCC1-205ENST00000483847 YEATS2Q9ULM3 1422 aa18.56■□□□□ 0.56
SMARCC1-205ENST00000483847 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
SMARCC1-205ENST00000483847 ZMYM4Q5VZL5 1548 aa18.54■□□□□ 0.56
SMARCC1-205ENST00000483847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.56
SMARCC1-205ENST00000483847 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
SMARCC1-205ENST00000483847 CFAP74Q9C0B2 1584 aa18.54■□□□□ 0.56
SMARCC1-205ENST00000483847 CSRNP3Q8WYN3 585 aa18.53■□□□□ 0.56
SMARCC1-205ENST00000483847 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
SMARCC1-205ENST00000483847 PLEKHD1A6NEE1 506 aa18.52■□□□□ 0.56
SMARCC1-205ENST00000483847 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
SMARCC1-205ENST00000483847 CERKQ8TCT0 537 aa18.51■□□□□ 0.55
SMARCC1-205ENST00000483847 MLECQ14165 292 aa18.5■□□□□ 0.55
SMARCC1-205ENST00000483847 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
SMARCC1-205ENST00000483847 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
SMARCC1-205ENST00000483847 FER1L4A9Z1Z3 1794 aa18.49■□□□□ 0.55
SMARCC1-205ENST00000483847 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms