RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 PLEKHG5O94827 1062 aa11.03□□□□□ -0.64
PDCD4-207ENST00000483595 FARP1Q9Y4F1 1045 aaPredicted RBP11.01□□□□□ -0.65
PDCD4-207ENST00000483595 BICRAQ9NZM4 1560 aa11.01□□□□□ -0.65
PDCD4-207ENST00000483595 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
PDCD4-207ENST00000483595 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
PDCD4-207ENST00000483595 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
PDCD4-207ENST00000483595 NUBP1P53384 320 aa10.97□□□□□ -0.65
PDCD4-207ENST00000483595 RTN4Q9NQC3 1192 aaKnown RBP10.96□□□□□ -0.65
PDCD4-207ENST00000483595 PEG3Q9GZU2 1588 aa10.93□□□□□ -0.66
PDCD4-207ENST00000483595 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
PDCD4-207ENST00000483595 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
PDCD4-207ENST00000483595 WIZO95785 1651 aa10.92□□□□□ -0.66
PDCD4-207ENST00000483595 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDCD4-207ENST00000483595 AMER1Q5JTC6 1135 aaPredicted RBP10.89□□□□□ -0.67
PDCD4-207ENST00000483595 EVX2Q03828 476 aa10.88□□□□□ -0.67
PDCD4-207ENST00000483595 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
PDCD4-207ENST00000483595 HAX1O00165 279 aa10.86□□□□□ -0.67
PDCD4-207ENST00000483595 PKD2Q13563 968 aa10.85□□□□□ -0.67
PDCD4-207ENST00000483595 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
PDCD4-207ENST00000483595 FAM212AQ96EL1 285 aa10.81□□□□□ -0.68
PDCD4-207ENST00000483595 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
PDCD4-207ENST00000483595 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
PDCD4-207ENST00000483595 CIZ1Q9ULV3 898 aaPredicted RBP10.8□□□□□ -0.68
PDCD4-207ENST00000483595 ATAD2BQ9ULI0 1458 aa10.8□□□□□ -0.68
PDCD4-207ENST00000483595 CD44P16070 742 aaKnown RBP10.79□□□□□ -0.68
PDCD4-207ENST00000483595 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
PDCD4-207ENST00000483595 DCAF8Q5TAQ9 597 aa10.78□□□□□ -0.68
PDCD4-207ENST00000483595 GSE1Q14687 1217 aa10.76□□□□□ -0.69
PDCD4-207ENST00000483595 CCDC61Q9Y6R9 512 aa10.75□□□□□ -0.69
PDCD4-207ENST00000483595 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
PDCD4-207ENST00000483595 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
PDCD4-207ENST00000483595 HMGXB3Q12766 1538 aa10.73□□□□□ -0.69
PDCD4-207ENST00000483595 EIF4G1Q04637 1599 aaKnown RBP10.73□□□□□ -0.69
PDCD4-207ENST00000483595 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
PDCD4-207ENST00000483595 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
PDCD4-207ENST00000483595 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
PDCD4-207ENST00000483595 PYGBP11216 843 aa10.7□□□□□ -0.7
PDCD4-207ENST00000483595 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
PDCD4-207ENST00000483595 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
PDCD4-207ENST00000483595 RNF25Q96BH1 459 aaPredicted RBP10.68□□□□□ -0.7
PDCD4-207ENST00000483595 RGL2O15211 777 aa10.67□□□□□ -0.7
PDCD4-207ENST00000483595 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
PDCD4-207ENST00000483595 EEA1Q15075 1411 aa10.65□□□□□ -0.7
PDCD4-207ENST00000483595 CHRM1P11229 460 aaPredicted RBP10.64□□□□□ -0.71
PDCD4-207ENST00000483595 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
PDCD4-207ENST00000483595 MAP3K13O43283 966 aa10.61□□□□□ -0.71
PDCD4-207ENST00000483595 GABBR2O75899 941 aa10.58□□□□□ -0.72
PDCD4-207ENST00000483595 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
PDCD4-207ENST00000483595 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
PDCD4-207ENST00000483595 MS4A3Q96HJ5 214 aa10.56□□□□□ -0.72
PDCD4-207ENST00000483595 PCDHB8Q9UN66 801 aa10.56□□□□□ -0.72
PDCD4-207ENST00000483595 PCDHB13Q9Y5F0 798 aa10.56□□□□□ -0.72
PDCD4-207ENST00000483595 LOC105371045A0A1W2PR82 267 aa10.54□□□□□ -0.72
PDCD4-207ENST00000483595 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
PDCD4-207ENST00000483595 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
PDCD4-207ENST00000483595 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
PDCD4-207ENST00000483595 CFTRP13569 1480 aa10.52□□□□□ -0.73
PDCD4-207ENST00000483595 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
PDCD4-207ENST00000483595 ZNF467Q7Z7K2 595 aaPredicted RBP10.5□□□□□ -0.73
PDCD4-207ENST00000483595 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
PDCD4-207ENST00000483595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-207ENST00000483595 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-207ENST00000483595 ZFP91Q96JP5 570 aaPredicted RBP10.46□□□□□ -0.73
PDCD4-207ENST00000483595 CADPSQ9ULU8 1353 aa10.46□□□□□ -0.74
PDCD4-207ENST00000483595 TOP2BQ02880 1626 aa10.46□□□□□ -0.74
PDCD4-207ENST00000483595 CC2D2AQ9P2K1 1620 aa10.46□□□□□ -0.74
PDCD4-207ENST00000483595 FAM9AQ8IZU1 332 aaPredicted RBP10.45□□□□□ -0.74
PDCD4-207ENST00000483595 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
PDCD4-207ENST00000483595 PSEN1P49768 467 aa10.43□□□□□ -0.74
PDCD4-207ENST00000483595 CLCN6P51797 869 aa10.43□□□□□ -0.74
PDCD4-207ENST00000483595 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
PDCD4-207ENST00000483595 BIVM-ERCC5R4GMW8 1640 aa10.43□□□□□ -0.74
PDCD4-207ENST00000483595 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
PDCD4-207ENST00000483595 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
PDCD4-207ENST00000483595 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
PDCD4-207ENST00000483595 CHGAP10645 457 aaKnown RBP10.41□□□□□ -0.74
PDCD4-207ENST00000483595 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
PDCD4-207ENST00000483595 CEP164Q9UPV0 1460 aa10.4□□□□□ -0.74
PDCD4-207ENST00000483595 SOGA1O94964 1423 aa10.4□□□□□ -0.75
PDCD4-207ENST00000483595 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
PDCD4-207ENST00000483595 TRIM26Q12899 539 aaPredicted RBP10.39□□□□□ -0.75
PDCD4-207ENST00000483595 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
PDCD4-207ENST00000483595 BMP2KQ9NSY1 1161 aaPredicted RBP10.39□□□□□ -0.75
PDCD4-207ENST00000483595 STK25O00506 426 aa10.38□□□□□ -0.75
PDCD4-207ENST00000483595 KIF21BO75037 1637 aa10.37□□□□□ -0.75
PDCD4-207ENST00000483595 TIE1P35590 1138 aa10.37□□□□□ -0.75
PDCD4-207ENST00000483595 TTLL13PA6NNM8 815 aa10.36□□□□□ -0.75
PDCD4-207ENST00000483595 TMEM106CQ9BVX2 250 aa10.36□□□□□ -0.75
PDCD4-207ENST00000483595 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
PDCD4-207ENST00000483595 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
PDCD4-207ENST00000483595 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
PDCD4-207ENST00000483595 NKX1-1Q15270 411 aaPredicted RBP10.33□□□□□ -0.76
PDCD4-207ENST00000483595 LAMC3Q9Y6N6 1575 aa10.33□□□□□ -0.76
PDCD4-207ENST00000483595 CUX1P39880 1505 aa10.33□□□□□ -0.76
PDCD4-207ENST00000483595 ATMINO43313 823 aaPredicted RBP10.32□□□□□ -0.76
PDCD4-207ENST00000483595 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
PDCD4-207ENST00000483595 ERICH3Q5RHP9 1530 aa10.32□□□□□ -0.76
PDCD4-207ENST00000483595 ATN1P54259 1190 aaPredicted RBP10.31□□□□□ -0.76
PDCD4-207ENST00000483595 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
PDCD4-207ENST00000483595 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms