RNA–Protein interactions for RNA: ENST00000483437.1

KPNA4-203, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 5

Gene KPNA4, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-203ENST00000483437 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
KPNA4-203ENST00000483437 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
KPNA4-203ENST00000483437 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
KPNA4-203ENST00000483437 NUBP1P53384 320 aa12.24□□□□□ -0.45
KPNA4-203ENST00000483437 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
KPNA4-203ENST00000483437 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
KPNA4-203ENST00000483437 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
KPNA4-203ENST00000483437 LHX8Q68G74 356 aa12.18□□□□□ -0.46
KPNA4-203ENST00000483437 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
KPNA4-203ENST00000483437 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
KPNA4-203ENST00000483437 MAP3K13O43283 966 aa12.12□□□□□ -0.47
KPNA4-203ENST00000483437 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
KPNA4-203ENST00000483437 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
KPNA4-203ENST00000483437 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
KPNA4-203ENST00000483437 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
KPNA4-203ENST00000483437 DCAF8Q5TAQ9 597 aa12.09□□□□□ -0.47
KPNA4-203ENST00000483437 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
KPNA4-203ENST00000483437 GSE1Q14687 1217 aa12.04□□□□□ -0.48
KPNA4-203ENST00000483437 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
KPNA4-203ENST00000483437 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
KPNA4-203ENST00000483437 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
KPNA4-203ENST00000483437 SGIP1Q9BQI5 828 aa12□□□□□ -0.49
KPNA4-203ENST00000483437 TIE1P35590 1138 aa11.97□□□□□ -0.49
KPNA4-203ENST00000483437 IFNL1Q8IU54 200 aa11.97□□□□□ -0.49
KPNA4-203ENST00000483437 PCDHB13Q9Y5F0 798 aa11.97□□□□□ -0.49
KPNA4-203ENST00000483437 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
KPNA4-203ENST00000483437 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
KPNA4-203ENST00000483437 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
KPNA4-203ENST00000483437 C7P10643 843 aa11.93□□□□□ -0.5
KPNA4-203ENST00000483437 PYGBP11216 843 aa11.93□□□□□ -0.5
KPNA4-203ENST00000483437 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
KPNA4-203ENST00000483437 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
KPNA4-203ENST00000483437 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
KPNA4-203ENST00000483437 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
KPNA4-203ENST00000483437 TRIM41Q8WV44 630 aa11.89□□□□□ -0.51
KPNA4-203ENST00000483437 PKD2Q13563 968 aa11.84□□□□□ -0.51
KPNA4-203ENST00000483437 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
KPNA4-203ENST00000483437 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
KPNA4-203ENST00000483437 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
KPNA4-203ENST00000483437 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
KPNA4-203ENST00000483437 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
KPNA4-203ENST00000483437 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
KPNA4-203ENST00000483437 IER5LQ5T953 404 aa11.77□□□□□ -0.53
KPNA4-203ENST00000483437 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
KPNA4-203ENST00000483437 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.53
KPNA4-203ENST00000483437 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
KPNA4-203ENST00000483437 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
KPNA4-203ENST00000483437 RGL2O15211 777 aa11.68□□□□□ -0.54
KPNA4-203ENST00000483437 SEC24BO95487 1268 aa11.68□□□□□ -0.54
KPNA4-203ENST00000483437 PDAP1Q13442 181 aaKnown RBP11.67□□□□□ -0.54
KPNA4-203ENST00000483437 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
KPNA4-203ENST00000483437 PSEN1P49768 467 aa11.66□□□□□ -0.54
KPNA4-203ENST00000483437 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
KPNA4-203ENST00000483437 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
KPNA4-203ENST00000483437 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
KPNA4-203ENST00000483437 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
KPNA4-203ENST00000483437 PLCG2P16885 1265 aa11.6□□□□□ -0.55
KPNA4-203ENST00000483437 OCEL1Q9H607 264 aa11.6□□□□□ -0.55
KPNA4-203ENST00000483437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
KPNA4-203ENST00000483437 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
KPNA4-203ENST00000483437 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
KPNA4-203ENST00000483437 LCE2DQ5TA82 110 aaPredicted RBP11.56□□□□□ -0.56
KPNA4-203ENST00000483437 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
KPNA4-203ENST00000483437 GOLGA2Q08379 1002 aa11.52□□□□□ -0.57
KPNA4-203ENST00000483437 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
KPNA4-203ENST00000483437 STK25O00506 426 aa11.5□□□□□ -0.57
KPNA4-203ENST00000483437 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
KPNA4-203ENST00000483437 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
KPNA4-203ENST00000483437 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
KPNA4-203ENST00000483437 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
KPNA4-203ENST00000483437 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■□□□ 14.2
KPNA4-203ENST00000483437 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
KPNA4-203ENST00000483437 POTEMA6NI47 508 aa11.44□□□□□ -0.58
KPNA4-203ENST00000483437 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
KPNA4-203ENST00000483437 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
KPNA4-203ENST00000483437 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
KPNA4-203ENST00000483437 EFCAB3Q8N7B9 438 aa11.44□□□□□ -0.58
KPNA4-203ENST00000483437 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
KPNA4-203ENST00000483437 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
KPNA4-203ENST00000483437 SOX12O15370 315 aa11.38□□□□□ -0.59
KPNA4-203ENST00000483437 L3MBTL3Q96JM7 780 aaPredicted RBP11.38□□□□□ -0.59
KPNA4-203ENST00000483437 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
KPNA4-203ENST00000483437 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
KPNA4-203ENST00000483437 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
KPNA4-203ENST00000483437 ST18O60284 1047 aa11.31□□□□□ -0.6
KPNA4-203ENST00000483437 NLRP6P59044 892 aa11.31□□□□□ -0.6
KPNA4-203ENST00000483437 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
KPNA4-203ENST00000483437 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
KPNA4-203ENST00000483437 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
KPNA4-203ENST00000483437 BOLA1Q9Y3E2 137 aa11.31□□□□□ -0.6
KPNA4-203ENST00000483437 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
KPNA4-203ENST00000483437 FBXO22Q8NEZ5 403 aa11.28□□□□□ -0.6
KPNA4-203ENST00000483437 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
KPNA4-203ENST00000483437 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
KPNA4-203ENST00000483437 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
KPNA4-203ENST00000483437 SNPHO15079 494 aa11.21□□□□□ -0.61
KPNA4-203ENST00000483437 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
KPNA4-203ENST00000483437 G3V3G9 751 aa11.19□□□□□ -0.62
KPNA4-203ENST00000483437 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
KPNA4-203ENST00000483437 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms