RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
DDR1-244ENST00000482873 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
DDR1-244ENST00000482873 POLA1P09884 1462 aaPredicted RBP22.11■■□□□ 1.13
DDR1-244ENST00000482873 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
DDR1-244ENST00000482873 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
DDR1-244ENST00000482873 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
DDR1-244ENST00000482873 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
DDR1-244ENST00000482873 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
DDR1-244ENST00000482873 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
DDR1-244ENST00000482873 TIAM1Q13009 1591 aa22.02■■□□□ 1.12
DDR1-244ENST00000482873 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
DDR1-244ENST00000482873 SIN3AQ96ST3 1273 aa22.01■■□□□ 1.11
DDR1-244ENST00000482873 DNMBPQ6XZF7 1577 aa22■■□□□ 1.11
DDR1-244ENST00000482873 BCL11AQ9H165 835 aa21.99■■□□□ 1.11
DDR1-244ENST00000482873 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
DDR1-244ENST00000482873 PCF11O94913 1555 aaKnown RBP21.96■■□□□ 1.11
DDR1-244ENST00000482873 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
DDR1-244ENST00000482873 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
DDR1-244ENST00000482873 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
DDR1-244ENST00000482873 HIRIP3Q9BW71 556 aaPredicted RBP21.9■■□□□ 1.1
DDR1-244ENST00000482873 TSHZ2Q9NRE2 1034 aa21.89■■□□□ 1.1
DDR1-244ENST00000482873 SETD5Q9C0A6 1442 aa21.88■■□□□ 1.09
DDR1-244ENST00000482873 PRKCSHP14314 528 aaPredicted RBP21.87■■□□□ 1.09
DDR1-244ENST00000482873 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
DDR1-244ENST00000482873 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
DDR1-244ENST00000482873 GAPVD1Q14C86 1478 aa21.81■■□□□ 1.08
DDR1-244ENST00000482873 MTUS2Q5JR59 1369 aa21.81■■□□□ 1.08
DDR1-244ENST00000482873 MAP3K1Q13233 1512 aa21.8■■□□□ 1.08
DDR1-244ENST00000482873 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
DDR1-244ENST00000482873 KCNH8Q96L42 1107 aa21.79■■□□□ 1.08
DDR1-244ENST00000482873 CASKIN1Q8WXD9 1431 aa21.78■■□□□ 1.08
DDR1-244ENST00000482873 KIF21AQ7Z4S6 1674 aa21.76■■□□□ 1.07
DDR1-244ENST00000482873 FYCO1Q9BQS8 1478 aa21.75■■□□□ 1.07
DDR1-244ENST00000482873 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.075e-8■■■■■ 51
DDR1-244ENST00000482873 ANP32EQ9BTT0 268 aa21.73■■□□□ 1.07
DDR1-244ENST00000482873 CHIC2Q9UKJ5 165 aa21.73■■□□□ 1.07
DDR1-244ENST00000482873 DDX10Q13206 875 aaKnown RBP21.73■■□□□ 1.07
DDR1-244ENST00000482873 CUL7Q14999 1698 aa21.73■■□□□ 1.07
DDR1-244ENST00000482873 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
DDR1-244ENST00000482873 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
DDR1-244ENST00000482873 EFCAB5A4FU69 1503 aa21.7■■□□□ 1.06
DDR1-244ENST00000482873 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
DDR1-244ENST00000482873 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
DDR1-244ENST00000482873 PTPRKQ15262 1439 aa21.68■■□□□ 1.06
DDR1-244ENST00000482873 FGD6Q6ZV73 1430 aa21.68■■□□□ 1.06
DDR1-244ENST00000482873 RRP7BPQ9NSQ0 103 aa21.67■■□□□ 1.06
DDR1-244ENST00000482873 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
DDR1-244ENST00000482873 BCANQ96GW7 911 aa21.65■■□□□ 1.06
DDR1-244ENST00000482873 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
DDR1-244ENST00000482873 NCOA2Q15596 1464 aa21.6■■□□□ 1.05
DDR1-244ENST00000482873 FKBP8Q14318 412 aa21.58■■□□□ 1.04
DDR1-244ENST00000482873 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
DDR1-244ENST00000482873 LRRIQ1Q96JM4 1722 aa21.57■■□□□ 1.04
DDR1-244ENST00000482873 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
DDR1-244ENST00000482873 GRIN2BQ13224 1484 aa21.55■■□□□ 1.04
DDR1-244ENST00000482873 CCDC18Q5T9S5 1454 aa21.54■■□□□ 1.04
DDR1-244ENST00000482873 SAMD9Q5K651 1589 aa21.54■■□□□ 1.04
DDR1-244ENST00000482873 TARBP1Q13395 1621 aaKnown RBP21.54■■□□□ 1.04
DDR1-244ENST00000482873 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
DDR1-244ENST00000482873 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
DDR1-244ENST00000482873 MAGI3Q5TCQ9 1506 aa21.53■■□□□ 1.04
DDR1-244ENST00000482873 TONSLQ96HA7 1378 aa21.52■■□□□ 1.04
DDR1-244ENST00000482873 FBLN2P98095 1184 aa21.52■■□□□ 1.03
DDR1-244ENST00000482873 FOXD1Q16676 465 aa21.51■■□□□ 1.03
DDR1-244ENST00000482873 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
DDR1-244ENST00000482873 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
DDR1-244ENST00000482873 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
DDR1-244ENST00000482873 ERCC6Q03468 1493 aa21.48■■□□□ 1.03
DDR1-244ENST00000482873 NAIPQ13075 1403 aa21.48■■□□□ 1.03
DDR1-244ENST00000482873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
DDR1-244ENST00000482873 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
DDR1-244ENST00000482873 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
DDR1-244ENST00000482873 RBM19Q9Y4C8 960 aaKnown RBP21.42■■□□□ 1.02
DDR1-244ENST00000482873 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
DDR1-244ENST00000482873 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
DDR1-244ENST00000482873 SUPT6HQ7KZ85 1726 aaKnown RBP21.4■■□□□ 1.02
DDR1-244ENST00000482873 EPRSP07814 1512 aaKnown RBP21.4■■□□□ 1.02
DDR1-244ENST00000482873 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
DDR1-244ENST00000482873 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
DDR1-244ENST00000482873 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.01
DDR1-244ENST00000482873 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
DDR1-244ENST00000482873 UGGT2Q9NYU1 1516 aa21.37■■□□□ 1.01
DDR1-244ENST00000482873 NEFLP07196 543 aa21.37■■□□□ 1.01
DDR1-244ENST00000482873 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
DDR1-244ENST00000482873 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
DDR1-244ENST00000482873 ZNF777Q9ULD5 760 aaPredicted RBP21.34■■□□□ 1.01
DDR1-244ENST00000482873 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
DDR1-244ENST00000482873 ANP32CO43423 234 aa21.32■■□□□ 1
DDR1-244ENST00000482873 CCER2I3L3R5 266 aa21.32■■□□□ 1
DDR1-244ENST00000482873 KDM6BO15054 1643 aa21.31■■□□□ 1
DDR1-244ENST00000482873 MPHOSPH9Q99550 1183 aa21.31■■□□□ 1
DDR1-244ENST00000482873 HECW1Q76N89 1606 aa21.29■■□□□ 1
DDR1-244ENST00000482873 ARHGEF11O15085 1522 aa21.27■■□□□ 1
DDR1-244ENST00000482873 WDR62O43379 1518 aa21.27■■□□□ 1
DDR1-244ENST00000482873 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
DDR1-244ENST00000482873 HSPA5P11021 654 aaKnown RBP21.25■□□□□ 0.99
DDR1-244ENST00000482873 L3MBTL2Q969R5 705 aa21.25■□□□□ 0.99
DDR1-244ENST00000482873 DENND4BO75064 1496 aaPredicted RBP21.25■□□□□ 0.99
DDR1-244ENST00000482873 DISP1Q96F81 1524 aa21.24■□□□□ 0.99
DDR1-244ENST00000482873 CNGB1Q14028 1251 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms