RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
SHANK2-216ENST00000482659 RAPGEF2Q9Y4G8 1499 aa7.47□□□□□ -1.21
SHANK2-216ENST00000482659 KCNA4P22459 653 aa7.46□□□□□ -1.22
SHANK2-216ENST00000482659 RUSC2Q8N2Y8 1516 aa7.46□□□□□ -1.22
SHANK2-216ENST00000482659 KIAA0586Q9BVV6 1533 aa7.45□□□□□ -1.22
SHANK2-216ENST00000482659 ADAMTS12P58397 1594 aa7.45□□□□□ -1.22
SHANK2-216ENST00000482659 PRXQ9BXM0 1461 aa7.44□□□□□ -1.22
SHANK2-216ENST00000482659 MAPK8IP2Q13387 824 aaPredicted RBP7.44□□□□□ -1.22
SHANK2-216ENST00000482659 CYB5RLQ6IPT4 315 aa7.44□□□□□ -1.22
SHANK2-216ENST00000482659 CUL7Q14999 1698 aa7.42□□□□□ -1.22
SHANK2-216ENST00000482659 UBTFP17480 764 aaKnown RBP7.41□□□□□ -1.22
SHANK2-216ENST00000482659 NCBP3Q53F19 620 aaKnown RBP7.41□□□□□ -1.22
SHANK2-216ENST00000482659 CARMIL2Q6F5E8 1435 aa7.41□□□□□ -1.22
SHANK2-216ENST00000482659 PRG4Q92954 1404 aaPredicted RBP7.41□□□□□ -1.22
SHANK2-216ENST00000482659 PBRM1Q86U86 1689 aa7.41□□□□□ -1.22
SHANK2-216ENST00000482659 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.22
SHANK2-216ENST00000482659 ARHGEF11O15085 1522 aa7.39□□□□□ -1.23
SHANK2-216ENST00000482659 CEP170Q5SW79 1584 aa7.38□□□□□ -1.23
SHANK2-216ENST00000482659 NPM1P06748 294 aaKnown RBP eCLIP7.38□□□□□ -1.23
SHANK2-216ENST00000482659 CNKSR2Q8WXI2 1034 aa7.38□□□□□ -1.23
SHANK2-216ENST00000482659 PTPRGP23470 1445 aa7.36□□□□□ -1.23
SHANK2-216ENST00000482659 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
SHANK2-216ENST00000482659 GOLGA3Q08378 1498 aa7.36□□□□□ -1.23
SHANK2-216ENST00000482659 CHD1O14646 1710 aa7.35□□□□□ -1.23
SHANK2-216ENST00000482659 ARAP1Q96P48 1450 aa7.33□□□□□ -1.24
SHANK2-216ENST00000482659 EHMT2Q96KQ7 1210 aa7.33□□□□□ -1.24
SHANK2-216ENST00000482659 IQGAP2Q13576 1575 aa7.33□□□□□ -1.24
SHANK2-216ENST00000482659 UGGT2Q9NYU1 1516 aa7.32□□□□□ -1.24
SHANK2-216ENST00000482659 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
SHANK2-216ENST00000482659 RANGAP1P46060 587 aaPredicted RBP7.32□□□□□ -1.24
SHANK2-216ENST00000482659 DMRT2Q9Y5R5 561 aa7.32□□□□□ -1.24
SHANK2-216ENST00000482659 RIMBP3CA6NJZ7 1639 aa7.31□□□□□ -1.24
SHANK2-216ENST00000482659 RIMBP3BA6NNM3 1639 aa7.31□□□□□ -1.24
SHANK2-216ENST00000482659 RIMBP3Q9UFD9 1639 aa7.31□□□□□ -1.24
SHANK2-216ENST00000482659 P3H3Q8IVL6 736 aa7.31□□□□□ -1.24
SHANK2-216ENST00000482659 KIF21BO75037 1637 aa7.3□□□□□ -1.24
SHANK2-216ENST00000482659 SHROOM2Q13796 1616 aa7.3□□□□□ -1.24
SHANK2-216ENST00000482659 NPM3O75607 178 aaKnown RBP7.3□□□□□ -1.24
SHANK2-216ENST00000482659 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
SHANK2-216ENST00000482659 UACAQ9BZF9 1416 aa7.29□□□□□ -1.24
SHANK2-216ENST00000482659 TRHP20396 242 aaPredicted RBP7.29□□□□□ -1.24
SHANK2-216ENST00000482659 ERCC6L2Q5T890 1561 aa7.27□□□□□ -1.25
SHANK2-216ENST00000482659 UHRF1BP1LA0JNW5 1464 aa7.26□□□□□ -1.25
SHANK2-216ENST00000482659 LOC105371045A0A1W2PR82 267 aa7.26□□□□□ -1.25
SHANK2-216ENST00000482659 FMN1Q68DA7 1419 aa7.26□□□□□ -1.25
SHANK2-216ENST00000482659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.25□□□□□ -1.25
SHANK2-216ENST00000482659 HNRNPUL2Q1KMD3 747 aaKnown RBP7.25□□□□□ -1.25
SHANK2-216ENST00000482659 CDK11AQ9UQ88 783 aaPredicted RBP7.25□□□□□ -1.25
SHANK2-216ENST00000482659 EFCAB5A4FU69 1503 aa7.25□□□□□ -1.25
SHANK2-216ENST00000482659 ATP1B4Q9UN42 357 aaPredicted RBP7.24□□□□□ -1.25
SHANK2-216ENST00000482659 KIAA0556O60303 1618 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 ABCC2Q92887 1545 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 PLEKHD1A6NEE1 506 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 RNF216Q9NWF9 866 aaPredicted RBP7.23□□□□□ -1.25
SHANK2-216ENST00000482659 CLIP1P30622 1438 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 FHOD3Q2V2M9 1422 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 PLB1Q6P1J6 1458 aa7.23□□□□□ -1.25
SHANK2-216ENST00000482659 FAM69CQ0P6D2 419 aa7.22□□□□□ -1.25
SHANK2-216ENST00000482659 ARHGAP35Q9NRY4 1499 aa7.21□□□□□ -1.26
SHANK2-216ENST00000482659 KDM5BQ9UGL1 1544 aa7.21□□□□□ -1.26
SHANK2-216ENST00000482659 SAMD9Q5K651 1589 aa7.2□□□□□ -1.26
SHANK2-216ENST00000482659 CEP162Q5TB80 1403 aa7.19□□□□□ -1.26
SHANK2-216ENST00000482659 ASXL2Q76L83 1435 aa7.19□□□□□ -1.26
SHANK2-216ENST00000482659 ARID3CA6NKF2 412 aa7.19□□□□□ -1.26
SHANK2-216ENST00000482659 HOXD11P31277 338 aaPredicted RBP7.19□□□□□ -1.26
SHANK2-216ENST00000482659 KCNH8Q96L42 1107 aa7.19□□□□□ -1.26
SHANK2-216ENST00000482659 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
SHANK2-216ENST00000482659 ATP10BO94823 1461 aa7.18□□□□□ -1.26
SHANK2-216ENST00000482659 MAPKBP1O60336 1514 aa7.18□□□□□ -1.26
SHANK2-216ENST00000482659 ABCC10Q5T3U5 1492 aa7.17□□□□□ -1.26
SHANK2-216ENST00000482659 ABCA8O94911 1581 aa7.17□□□□□ -1.26
SHANK2-216ENST00000482659 APLP2Q06481 763 aa7.17□□□□□ -1.26
SHANK2-216ENST00000482659 CASKIN1Q8WXD9 1431 aa7.17□□□□□ -1.26
SHANK2-216ENST00000482659 NUP153P49790 1475 aaKnown RBP7.16□□□□□ -1.26
SHANK2-216ENST00000482659 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
SHANK2-216ENST00000482659 ADCY10Q96PN6 1610 aa7.16□□□□□ -1.26
SHANK2-216ENST00000482659 CCDC18Q5T9S5 1454 aa7.13□□□□□ -1.27
SHANK2-216ENST00000482659 PHLDB1Q86UU1 1377 aa7.13□□□□□ -1.27
SHANK2-216ENST00000482659 EPRSP07814 1512 aaKnown RBP7.12□□□□□ -1.27
SHANK2-216ENST00000482659 FYCO1Q9BQS8 1478 aa7.12□□□□□ -1.27
SHANK2-216ENST00000482659 CD109Q6YHK3 1445 aa7.12□□□□□ -1.27
SHANK2-216ENST00000482659 VPS8Q8N3P4 1428 aa7.12□□□□□ -1.27
SHANK2-216ENST00000482659 RAPGEF6Q8TEU7 1601 aa7.12□□□□□ -1.27
SHANK2-216ENST00000482659 SLC4A1APQ9BWU0 796 aaKnown RBP7.11□□□□□ -1.27
SHANK2-216ENST00000482659 TROQ12816 1431 aaPredicted RBP7.1□□□□□ -1.27
SHANK2-216ENST00000482659 MTUS2Q5JR59 1369 aa7.1□□□□□ -1.27
SHANK2-216ENST00000482659 EFCAB2Q5VUJ9 269 aa7.1□□□□□ -1.27
SHANK2-216ENST00000482659 GLI2P10070 1586 aa7.1□□□□□ -1.27
SHANK2-216ENST00000482659 TEX14Q8IWB6 1497 aa7.1□□□□□ -1.27
SHANK2-216ENST00000482659 HECW1Q76N89 1606 aa7.09□□□□□ -1.27
SHANK2-216ENST00000482659 MAGI3Q5TCQ9 1506 aa7.08□□□□□ -1.28
SHANK2-216ENST00000482659 ZCCHC11Q5TAX3 1644 aaKnown RBP7.08□□□□□ -1.28
SHANK2-216ENST00000482659 CFDP1Q9UEE9 299 aaPredicted RBP7.07□□□□□ -1.28
SHANK2-216ENST00000482659 PLCH2O75038 1416 aa7.07□□□□□ -1.28
SHANK2-216ENST00000482659 DIP2BQ9P265 1576 aa7.07□□□□□ -1.28
SHANK2-216ENST00000482659 CDK13Q14004 1512 aaKnown RBP7.06□□□□□ -1.28
SHANK2-216ENST00000482659 POTEDQ86YR6 584 aa7.06□□□□□ -1.28
SHANK2-216ENST00000482659 CCNB3Q8WWL7 1395 aa7.06□□□□□ -1.28
SHANK2-216ENST00000482659 MAP3K1Q13233 1512 aa7.06□□□□□ -1.28
SHANK2-216ENST00000482659 RSPH4AQ5TD94 716 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms