RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 CARMIL1Q5VZK9 1371 aa26.28■■□□□ 1.8
EXOSC3-205ENST00000482614 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
EXOSC3-205ENST00000482614 PRG4Q92954 1404 aaPredicted RBP26.27■■□□□ 1.8
EXOSC3-205ENST00000482614 KIAA0586Q9BVV6 1533 aa26.24■■□□□ 1.79
EXOSC3-205ENST00000482614 RAPGEF2Q9Y4G8 1499 aa26.08■■□□□ 1.77
EXOSC3-205ENST00000482614 IQGAP2Q13576 1575 aa26.02■■□□□ 1.76
EXOSC3-205ENST00000482614 CARMIL2Q6F5E8 1435 aa25.98■■□□□ 1.75
EXOSC3-205ENST00000482614 NPM1P06748 294 aaKnown RBP eCLIP25.95■■□□□ 1.74
EXOSC3-205ENST00000482614 PTPRGP23470 1445 aa25.93■■□□□ 1.74
EXOSC3-205ENST00000482614 TNIKQ9UKE5 1360 aa25.92■■□□□ 1.74
EXOSC3-205ENST00000482614 ADCY10Q96PN6 1610 aa25.9■■□□□ 1.74
EXOSC3-205ENST00000482614 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
EXOSC3-205ENST00000482614 UGGT2Q9NYU1 1516 aa25.88■■□□□ 1.73
EXOSC3-205ENST00000482614 TTBK1Q5TCY1 1321 aaPredicted RBP25.86■■□□□ 1.73
EXOSC3-205ENST00000482614 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
EXOSC3-205ENST00000482614 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
EXOSC3-205ENST00000482614 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
EXOSC3-205ENST00000482614 MAPKBP1O60336 1514 aa25.82■■□□□ 1.72
EXOSC3-205ENST00000482614 KIF13AQ9H1H9 1805 aa25.79■■□□□ 1.72
EXOSC3-205ENST00000482614 EEA1Q15075 1411 aa25.78■■□□□ 1.72
EXOSC3-205ENST00000482614 KIAA0556O60303 1618 aa25.77■■□□□ 1.72
EXOSC3-205ENST00000482614 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
EXOSC3-205ENST00000482614 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
EXOSC3-205ENST00000482614 UACAQ9BZF9 1416 aa25.73■■□□□ 1.71
EXOSC3-205ENST00000482614 FAM69CQ0P6D2 419 aa25.73■■□□□ 1.71
EXOSC3-205ENST00000482614 ABCC2Q92887 1545 aa25.73■■□□□ 1.71
EXOSC3-205ENST00000482614 GOLGA3Q08378 1498 aa25.72■■□□□ 1.71
EXOSC3-205ENST00000482614 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
EXOSC3-205ENST00000482614 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
EXOSC3-205ENST00000482614 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
EXOSC3-205ENST00000482614 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
EXOSC3-205ENST00000482614 KDM5BQ9UGL1 1544 aa25.6■■□□□ 1.69
EXOSC3-205ENST00000482614 ASXL2Q76L83 1435 aa25.59■■□□□ 1.69
EXOSC3-205ENST00000482614 ZCCHC11Q5TAX3 1644 aaKnown RBP25.54■■□□□ 1.68
EXOSC3-205ENST00000482614 ABCA8O94911 1581 aa25.52■■□□□ 1.68
EXOSC3-205ENST00000482614 KIF21BO75037 1637 aa25.52■■□□□ 1.68
EXOSC3-205ENST00000482614 TSPOAP1O95153 1857 aa25.51■■□□□ 1.67
EXOSC3-205ENST00000482614 GLI2P10070 1586 aa25.5■■□□□ 1.67
EXOSC3-205ENST00000482614 P3H3Q8IVL6 736 aa25.5■■□□□ 1.67
EXOSC3-205ENST00000482614 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
EXOSC3-205ENST00000482614 EPRSP07814 1512 aaKnown RBP25.44■■□□□ 1.66
EXOSC3-205ENST00000482614 WDR7Q9Y4E6 1490 aa25.41■■□□□ 1.66
EXOSC3-205ENST00000482614 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
EXOSC3-205ENST00000482614 KDM6BO15054 1643 aa25.38■■□□□ 1.65
EXOSC3-205ENST00000482614 MAP3K4Q9Y6R4 1608 aa25.36■■□□□ 1.65
EXOSC3-205ENST00000482614 PPRC1Q5VV67 1664 aaKnown RBP25.36■■□□□ 1.65
EXOSC3-205ENST00000482614 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
EXOSC3-205ENST00000482614 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
EXOSC3-205ENST00000482614 EFCAB5A4FU69 1503 aa25.32■■□□□ 1.64
EXOSC3-205ENST00000482614 ATP10BO94823 1461 aa25.32■■□□□ 1.64
EXOSC3-205ENST00000482614 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
EXOSC3-205ENST00000482614 EHMT2Q96KQ7 1210 aa25.3■■□□□ 1.64
EXOSC3-205ENST00000482614 KCNH8Q96L42 1107 aa25.3■■□□□ 1.64
EXOSC3-205ENST00000482614 TEX14Q8IWB6 1497 aa25.29■■□□□ 1.64
EXOSC3-205ENST00000482614 ARID3CA6NKF2 412 aa25.29■■□□□ 1.64
EXOSC3-205ENST00000482614 CFAP43Q8NDM7 1665 aa25.25■■□□□ 1.63
EXOSC3-205ENST00000482614 CD109Q6YHK3 1445 aa25.23■■□□□ 1.63
EXOSC3-205ENST00000482614 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
EXOSC3-205ENST00000482614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
EXOSC3-205ENST00000482614 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
EXOSC3-205ENST00000482614 NUP153P49790 1475 aaKnown RBP25.21■■□□□ 1.63
EXOSC3-205ENST00000482614 MAGI3Q5TCQ9 1506 aa25.2■■□□□ 1.62
EXOSC3-205ENST00000482614 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
EXOSC3-205ENST00000482614 ARHGAP35Q9NRY4 1499 aa25.13■■□□□ 1.61
EXOSC3-205ENST00000482614 ABCA9Q8IUA7 1624 aa25.11■■□□□ 1.61
EXOSC3-205ENST00000482614 FMN1Q68DA7 1419 aa25.11■■□□□ 1.61
EXOSC3-205ENST00000482614 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
EXOSC3-205ENST00000482614 ATP1B4Q9UN42 357 aaPredicted RBP25.02■■□□□ 1.6
EXOSC3-205ENST00000482614 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
EXOSC3-205ENST00000482614 HECW1Q76N89 1606 aa25.01■■□□□ 1.59
EXOSC3-205ENST00000482614 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
EXOSC3-205ENST00000482614 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
EXOSC3-205ENST00000482614 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
EXOSC3-205ENST00000482614 NEO1Q92859 1461 aa24.96■■□□□ 1.59
EXOSC3-205ENST00000482614 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
EXOSC3-205ENST00000482614 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.92■■□□□ 1.58
EXOSC3-205ENST00000482614 CLIP1P30622 1438 aa24.87■■□□□ 1.57
EXOSC3-205ENST00000482614 TTC37Q6PGP7 1564 aa24.87■■□□□ 1.57
EXOSC3-205ENST00000482614 CASKIN1Q8WXD9 1431 aa24.86■■□□□ 1.57
EXOSC3-205ENST00000482614 CFAP74Q9C0B2 1584 aa24.85■■□□□ 1.57
EXOSC3-205ENST00000482614 ADGRL1O94910 1474 aa24.84■■□□□ 1.57
EXOSC3-205ENST00000482614 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
EXOSC3-205ENST00000482614 FANCAO15360 1455 aa24.83■■□□□ 1.57
EXOSC3-205ENST00000482614 RAPGEF3O95398 923 aa24.83■■□□□ 1.57
EXOSC3-205ENST00000482614 PCF11O94913 1555 aaKnown RBP24.82■■□□□ 1.56
EXOSC3-205ENST00000482614 AKNAQ7Z591 1439 aa24.82■■□□□ 1.56
EXOSC3-205ENST00000482614 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
EXOSC3-205ENST00000482614 CCDC18Q5T9S5 1454 aa24.81■■□□□ 1.56
EXOSC3-205ENST00000482614 PLCH2O75038 1416 aa24.79■■□□□ 1.56
EXOSC3-205ENST00000482614 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
EXOSC3-205ENST00000482614 KIF14Q15058 1648 aa24.78■■□□□ 1.56
EXOSC3-205ENST00000482614 FYCO1Q9BQS8 1478 aa24.77■■□□□ 1.56
EXOSC3-205ENST00000482614 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
EXOSC3-205ENST00000482614 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
EXOSC3-205ENST00000482614 RICTORQ6R327 1708 aa24.73■■□□□ 1.55
EXOSC3-205ENST00000482614 EFCAB2Q5VUJ9 269 aa24.73■■□□□ 1.55
EXOSC3-205ENST00000482614 SCAPERQ9BY12 1400 aa24.68■■□□□ 1.54
EXOSC3-205ENST00000482614 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
EXOSC3-205ENST00000482614 ARHGAP5Q13017 1502 aa24.65■■□□□ 1.54
EXOSC3-205ENST00000482614 ZMYM4Q5VZL5 1548 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms