RNA–Protein interactions for RNA: ENST00000482544.5

TAF1-215, Transcript of TATA-box binding protein associated factor 1, human

TSL 3

Gene TAF1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1-215	ENST00000482544	SHROOM2	Q13796	1616 aa		14.04	□□□□□ -0.16
TAF1-215	ENST00000482544	PRG4	Q92954	1404 aa	Predicted RBP	14.03	□□□□□ -0.16
TAF1-215	ENST00000482544	TOP2A	P11388	1531 aa	Known RBP	14.03	□□□□□ -0.16
TAF1-215	ENST00000482544	GRIN2A	Q12879	1464 aa		14.01	□□□□□ -0.17
TAF1-215	ENST00000482544	NUP160	Q12769	1436 aa		14.01	□□□□□ -0.17
TAF1-215	ENST00000482544	JPH4	Q96JJ6	628 aa		14.01	□□□□□ -0.17
TAF1-215	ENST00000482544	TEX14	Q8IWB6	1497 aa		13.99	□□□□□ -0.17
TAF1-215	ENST00000482544	PCF11	O94913	1555 aa	Known RBP	13.98	□□□□□ -0.17
TAF1-215	ENST00000482544	PBRM1	Q86U86	1689 aa		13.96	□□□□□ -0.17
TAF1-215	ENST00000482544	PTPRM	P28827	1452 aa		13.94	□□□□□ -0.18
TAF1-215	ENST00000482544	FGD5	Q6ZNL6	1462 aa		13.94	□□□□□ -0.18
TAF1-215	ENST00000482544	DMRT2	Q9Y5R5	561 aa		13.94	□□□□□ -0.18
TAF1-215	ENST00000482544	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.93	□□□□□ -0.18
TAF1-215	ENST00000482544	GLI2	P10070	1586 aa		13.93	□□□□□ -0.18
TAF1-215	ENST00000482544	PLB1	Q6P1J6	1458 aa		13.92	□□□□□ -0.18
TAF1-215	ENST00000482544	ADCY10	Q96PN6	1610 aa		13.91	□□□□□ -0.18
TAF1-215	ENST00000482544	CCDC88B	A6NC98	1476 aa		13.88	□□□□□ -0.19
TAF1-215	ENST00000482544	PPRC1	Q5VV67	1664 aa	Known RBP	13.87	□□□□□ -0.19
TAF1-215	ENST00000482544	HSPA2	P54652	639 aa		13.83	□□□□□ -0.2
TAF1-215	ENST00000482544	FHAD1	B1AJZ9	1412 aa		13.82	□□□□□ -0.2
TAF1-215	ENST00000482544	ASXL2	Q76L83	1435 aa		13.81	□□□□□ -0.2
TAF1-215	ENST00000482544	KIAA0586	Q9BVV6	1533 aa		13.81	□□□□□ -0.2
TAF1-215	ENST00000482544	PHF23	Q9BUL5	403 aa	Predicted RBP	13.77	□□□□□ -0.21
TAF1-215	ENST00000482544	ABCA5	Q8WWZ7	1642 aa		13.76	□□□□□ -0.21
TAF1-215	ENST00000482544	ABCA10	Q8WWZ4	1543 aa		13.76	□□□□□ -0.21
TAF1-215	ENST00000482544	ADAMTSL3	P82987	1691 aa		13.75	□□□□□ -0.21
TAF1-215	ENST00000482544	ADAMTS12	P58397	1594 aa		13.75	□□□□□ -0.21
TAF1-215	ENST00000482544	IQSEC2	Q5JU85	1478 aa		13.75	□□□□□ -0.21
TAF1-215	ENST00000482544	MAP3K4	Q9Y6R4	1608 aa		13.74	□□□□□ -0.21
TAF1-215	ENST00000482544	ABCC2	Q92887	1545 aa		13.74	□□□□□ -0.21
TAF1-215	ENST00000482544	KIF21B	O75037	1637 aa		13.73	□□□□□ -0.21
TAF1-215	ENST00000482544	PTPRG	P23470	1445 aa		13.72	□□□□□ -0.21
TAF1-215	ENST00000482544	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.71	□□□□□ -0.21
TAF1-215	ENST00000482544	EPRS	P07814	1512 aa	Known RBP	13.69	□□□□□ -0.22
TAF1-215	ENST00000482544	YEATS2	Q9ULM3	1422 aa		13.69	□□□□□ -0.22
TAF1-215	ENST00000482544	CUX1	P39880	1505 aa		13.67	□□□□□ -0.22
TAF1-215	ENST00000482544	UBAP1L	F5GYI3	381 aa		13.62	□□□□□ -0.23
TAF1-215	ENST00000482544	MAGI3	Q5TCQ9	1506 aa		13.61	□□□□□ -0.23
TAF1-215	ENST00000482544	MED1	Q15648	1581 aa	Predicted RBP	13.61	□□□□□ -0.23
TAF1-215	ENST00000482544	ERICH3	Q5RHP9	1530 aa		13.6	□□□□□ -0.23
TAF1-215	ENST00000482544	BCORL1	Q5H9F3	1711 aa		13.6	□□□□□ -0.23
TAF1-215	ENST00000482544	CD109	Q6YHK3	1445 aa		13.6	□□□□□ -0.23
TAF1-215	ENST00000482544	PLPPR3	Q6T4P5	718 aa		13.59	□□□□□ -0.23
TAF1-215	ENST00000482544	MADD	Q8WXG6	1647 aa		13.59	□□□□□ -0.23
TAF1-215	ENST00000482544	UHRF1BP1L	A0JNW5	1464 aa		13.59	□□□□□ -0.23
TAF1-215	ENST00000482544	TTBK1	Q5TCY1	1321 aa	Predicted RBP	13.59	□□□□□ -0.23
TAF1-215	ENST00000482544	RUSC2	Q8N2Y8	1516 aa		13.58	□□□□□ -0.24
TAF1-215	ENST00000482544	PTPRT	O14522	1441 aa		13.57	□□□□□ -0.24
TAF1-215	ENST00000482544	PHLDB1	Q86UU1	1377 aa		13.57	□□□□□ -0.24
TAF1-215	ENST00000482544	TNIK	Q9UKE5	1360 aa		13.57	□□□□□ -0.24
TAF1-215	ENST00000482544	CARMIL2	Q6F5E8	1435 aa		13.56	□□□□□ -0.24
TAF1-215	ENST00000482544	CUL7	Q14999	1698 aa		13.56	□□□□□ -0.24
TAF1-215	ENST00000482544	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.56	□□□□□ -0.24
TAF1-215	ENST00000482544	POGZ	Q7Z3K3	1410 aa		13.56	□□□□□ -0.24
TAF1-215	ENST00000482544	CFAP43	Q8NDM7	1665 aa		13.55	□□□□□ -0.24
TAF1-215	ENST00000482544	ARAP3	Q8WWN8	1544 aa		13.54	□□□□□ -0.24
TAF1-215	ENST00000482544	UACA	Q9BZF9	1416 aa		13.54	□□□□□ -0.24
TAF1-215	ENST00000482544	RIMS1	Q86UR5	1692 aa	Known RBP	13.53	□□□□□ -0.24
TAF1-215	ENST00000482544	KDM5B	Q9UGL1	1544 aa		13.5	□□□□□ -0.25
TAF1-215	ENST00000482544	WDR7	Q9Y4E6	1490 aa		13.48	□□□□□ -0.25
TAF1-215	ENST00000482544	LTBP4	Q8N2S1	1624 aa		13.47	□□□□□ -0.25
TAF1-215	ENST00000482544	HSPA1L	P34931	641 aa		13.46	□□□□□ -0.25
TAF1-215	ENST00000482544	KCNH8	Q96L42	1107 aa		13.46	□□□□□ -0.25
TAF1-215	ENST00000482544	SCAF1	Q9H7N4	1312 aa	Known RBP	13.45	□□□□□ -0.26
TAF1-215	ENST00000482544	TOM1	O60784	492 aa		13.45	□□□□□ -0.26
TAF1-215	ENST00000482544	STRC	Q7RTU9	1775 aa		13.44	□□□□□ -0.26
TAF1-215	ENST00000482544	PREX1	Q8TCU6	1659 aa		13.44	□□□□□ -0.26
TAF1-215	ENST00000482544	UHRF1BP1	Q6BDS2	1440 aa		13.41	□□□□□ -0.26
TAF1-215	ENST00000482544	RAPGEF3	O95398	923 aa		13.4	□□□□□ -0.26
TAF1-215	ENST00000482544	FANCA	O15360	1455 aa		13.39	□□□□□ -0.27
TAF1-215	ENST00000482544	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.39	□□□□□ -0.27
TAF1-215	ENST00000482544	PIP4K2B	P78356	416 aa		13.37	□□□□□ -0.27
TAF1-215	ENST00000482544	SETD1B	Q9UPS6	1966 aa	Known RBP	13.33	□□□□□ -0.28
TAF1-215	ENST00000482544	TTC37	Q6PGP7	1564 aa		13.32	□□□□□ -0.28
TAF1-215	ENST00000482544	AKNA	Q7Z591	1439 aa		13.31	□□□□□ -0.28
TAF1-215	ENST00000482544	MLEC	Q14165	292 aa		13.31	□□□□□ -0.28
TAF1-215	ENST00000482544	NEO1	Q92859	1461 aa		13.29	□□□□□ -0.28
TAF1-215	ENST00000482544	FOXD1	Q16676	465 aa		13.28	□□□□□ -0.28
TAF1-215	ENST00000482544	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.27	□□□□□ -0.29
TAF1-215	ENST00000482544	FER1L4	A9Z1Z3	1794 aa		13.27	□□□□□ -0.29
TAF1-215	ENST00000482544	RGS17	Q9UGC6	210 aa	Predicted RBP	13.26	□□□□□ -0.29
TAF1-215	ENST00000482544	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.25	□□□□□ -0.29
TAF1-215	ENST00000482544	ARHGEF40	Q8TER5	1519 aa		13.24	□□□□□ -0.29
TAF1-215	ENST00000482544	CEBPA	P49715	358 aa	Predicted RBP	13.24	□□□□□ -0.29
TAF1-215	ENST00000482544	NCOA1	Q15788	1441 aa		13.22	□□□□□ -0.29
TAF1-215	ENST00000482544	SUPT5H	O00267	1087 aa	Known RBP	13.21	□□□□□ -0.29
TAF1-215	ENST00000482544	IFFO2	Q5TF58	517 aa		13.21	□□□□□ -0.29
TAF1-215	ENST00000482544	PTPRK	Q15262	1439 aa		13.21	□□□□□ -0.3
TAF1-215	ENST00000482544	PKD2	Q13563	968 aa		13.2	□□□□□ -0.3
TAF1-215	ENST00000482544	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
TAF1-215	ENST00000482544	DENND4B	O75064	1496 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1-215	ENST00000482544	ESF1	Q9H501	851 aa	Known RBP	13.19	□□□□□ -0.3
TAF1-215	ENST00000482544	MAGI2	Q86UL8	1455 aa		13.18	□□□□□ -0.3
TAF1-215	ENST00000482544	POTEA	Q6S8J7	498 aa		13.17	□□□□□ -0.3
TAF1-215	ENST00000482544	EFCAB5	A4FU69	1503 aa		13.17	□□□□□ -0.3
TAF1-215	ENST00000482544	KIAA0556	O60303	1618 aa		13.17	□□□□□ -0.3
TAF1-215	ENST00000482544	IQGAP2	Q13576	1575 aa		13.15	□□□□□ -0.3
TAF1-215	ENST00000482544	FHOD3	Q2V2M9	1422 aa		13.14	□□□□□ -0.31
TAF1-215	ENST00000482544	ARHGEF12	Q9NZN5	1544 aa		13.14	□□□□□ -0.31
TAF1-215	ENST00000482544	BIVM-ERCC5	R4GMW8	1640 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms