RNA–Protein interactions for RNA: ENST00000482496.5

PDZD8-202, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 1,400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-202ENST00000482496 ASTLQ6HA08 431 aaPredicted RBP9.93□□□□□ -0.82
PDZD8-202ENST00000482496 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDZD8-202ENST00000482496 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
PDZD8-202ENST00000482496 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
PDZD8-202ENST00000482496 ATMINO43313 823 aaPredicted RBP9.87□□□□□ -0.83
PDZD8-202ENST00000482496 SCUBE2Q9NQ36 999 aa9.87□□□□□ -0.83
PDZD8-202ENST00000482496 FAM163AQ96GL9 167 aaPredicted RBP9.84□□□□□ -0.83
PDZD8-202ENST00000482496 MS4A3Q96HJ5 214 aa9.82□□□□□ -0.84
PDZD8-202ENST00000482496 MNX1P50219 401 aaPredicted RBP9.77□□□□□ -0.85
PDZD8-202ENST00000482496 ATN1P54259 1190 aaPredicted RBP9.71□□□□□ -0.86
PDZD8-202ENST00000482496 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
PDZD8-202ENST00000482496 POTEFA5A3E0 1075 aa9.65□□□□□ -0.87
PDZD8-202ENST00000482496 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.87
PDZD8-202ENST00000482496 CCDC61Q9Y6R9 512 aa9.63□□□□□ -0.87
PDZD8-202ENST00000482496 TIE1P35590 1138 aa9.62□□□□□ -0.87
PDZD8-202ENST00000482496 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
PDZD8-202ENST00000482496 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
PDZD8-202ENST00000482496 TSPYL2Q9H2G4 693 aaPredicted RBP9.59□□□□□ -0.87
PDZD8-202ENST00000482496 SEC24BO95487 1268 aa9.56□□□□□ -0.88
PDZD8-202ENST00000482496 IER5LQ5T953 404 aa9.55□□□□□ -0.88
PDZD8-202ENST00000482496 MMRN1Q13201 1228 aa9.53□□□□□ -0.88
PDZD8-202ENST00000482496 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
PDZD8-202ENST00000482496 ST18O60284 1047 aa9.52□□□□□ -0.89
PDZD8-202ENST00000482496 TRPC6Q9Y210 931 aa9.5□□□□□ -0.89
PDZD8-202ENST00000482496 TTLL13PA6NNM8 815 aa9.49□□□□□ -0.89
PDZD8-202ENST00000482496 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
PDZD8-202ENST00000482496 MAP3K13O43283 966 aa9.48□□□□□ -0.89
PDZD8-202ENST00000482496 SLAIN1Q8ND83 568 aa9.48□□□□□ -0.89
PDZD8-202ENST00000482496 PROM2Q8N271 834 aa9.48□□□□□ -0.89
PDZD8-202ENST00000482496 TMEM121BQ9BXQ6 578 aaPredicted RBP9.48□□□□□ -0.89
PDZD8-202ENST00000482496 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
PDZD8-202ENST00000482496 TRIM35Q9UPQ4 493 aa9.43□□□□□ -0.9
PDZD8-202ENST00000482496 PLEKHG5O94827 1062 aa9.4□□□□□ -0.9
PDZD8-202ENST00000482496 SNPHO15079 494 aa9.39□□□□□ -0.91
PDZD8-202ENST00000482496 PLCG2P16885 1265 aa9.36□□□□□ -0.91
PDZD8-202ENST00000482496 RASEFQ8IZ41 740 aa9.35□□□□□ -0.91
PDZD8-202ENST00000482496 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
PDZD8-202ENST00000482496 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
PDZD8-202ENST00000482496 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
PDZD8-202ENST00000482496 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
PDZD8-202ENST00000482496 MIER1Q8N108 512 aa9.26□□□□□ -0.93
PDZD8-202ENST00000482496 MARVELD3Q96A59 401 aa9.25□□□□□ -0.93
PDZD8-202ENST00000482496 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
PDZD8-202ENST00000482496 IFNL1Q8IU54 200 aa9.24□□□□□ -0.93
PDZD8-202ENST00000482496 ZBTB47Q9UFB7 747 aaPredicted RBP9.21□□□□□ -0.94
PDZD8-202ENST00000482496 EMP3P54852 163 aa9.2□□□□□ -0.94
PDZD8-202ENST00000482496 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
PDZD8-202ENST00000482496 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
PDZD8-202ENST00000482496 FKBP8Q14318 412 aa9.17□□□□□ -0.94
PDZD8-202ENST00000482496 NUBP1P53384 320 aa9.15□□□□□ -0.94
PDZD8-202ENST00000482496 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
PDZD8-202ENST00000482496 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
PDZD8-202ENST00000482496 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
PDZD8-202ENST00000482496 C3orf67Q6ZVT6 689 aa9.12□□□□□ -0.95
PDZD8-202ENST00000482496 FAM205CA6NFA0 338 aa9.1□□□□□ -0.95
PDZD8-202ENST00000482496 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
PDZD8-202ENST00000482496 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
PDZD8-202ENST00000482496 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
PDZD8-202ENST00000482496 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
PDZD8-202ENST00000482496 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
PDZD8-202ENST00000482496 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
PDZD8-202ENST00000482496 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
PDZD8-202ENST00000482496 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
PDZD8-202ENST00000482496 PYGBP11216 843 aa8.95□□□□□ -0.98
PDZD8-202ENST00000482496 HOXB1P14653 301 aaPredicted RBP8.94□□□□□ -0.98
PDZD8-202ENST00000482496 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
PDZD8-202ENST00000482496 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
PDZD8-202ENST00000482496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.984e-6■□□□□ 9
PDZD8-202ENST00000482496 HOXB3P14651 431 aaPredicted RBP8.91□□□□□ -0.98
PDZD8-202ENST00000482496 PTGER2P43116 358 aa8.91□□□□□ -0.98
PDZD8-202ENST00000482496 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
PDZD8-202ENST00000482496 ERBB3P21860 1342 aa8.9□□□□□ -0.98
PDZD8-202ENST00000482496 ILDR1Q86SU0 546 aaPredicted RBP8.89□□□□□ -0.99
PDZD8-202ENST00000482496 ZNF710Q8N1W2 664 aa8.89□□□□□ -0.99
PDZD8-202ENST00000482496 DOK7Q18PE1 504 aa8.88□□□□□ -0.99
PDZD8-202ENST00000482496 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
PDZD8-202ENST00000482496 G3V3G9 751 aa8.85□□□□□ -0.99
PDZD8-202ENST00000482496 VASPP50552 380 aaPredicted RBP8.85□□□□□ -0.99
PDZD8-202ENST00000482496 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
PDZD8-202ENST00000482496 BOLA1Q9Y3E2 137 aa8.82□□□□□ -1
PDZD8-202ENST00000482496 CHRM1P11229 460 aaPredicted RBP8.8□□□□□ -1
PDZD8-202ENST00000482496 VARS2Q5ST30 1063 aaKnown RBP8.8□□□□□ -1
PDZD8-202ENST00000482496 ZNF687Q8N1G0 1237 aa8.8□□□□□ -1
PDZD8-202ENST00000482496 PSEN1P49768 467 aa8.8□□□□□ -1
PDZD8-202ENST00000482496 GSE1Q14687 1217 aa8.8□□□□□ -1
PDZD8-202ENST00000482496 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
PDZD8-202ENST00000482496 ZSWIM6Q9HCJ5 1215 aa8.79□□□□□ -1
PDZD8-202ENST00000482496 KLHL34Q8N239 644 aa8.77□□□□□ -1.01
PDZD8-202ENST00000482496 DPY19L2Q6NUT2 758 aa8.76□□□□□ -1.01
PDZD8-202ENST00000482496 PDAP1Q13442 181 aaKnown RBP8.73□□□□□ -1.01
PDZD8-202ENST00000482496 CABP2Q9NPB3 220 aa8.67□□□□□ -1.02
PDZD8-202ENST00000482496 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
PDZD8-202ENST00000482496 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
PDZD8-202ENST00000482496 SPOCK2Q92563 424 aa8.65□□□□□ -1.02
PDZD8-202ENST00000482496 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
PDZD8-202ENST00000482496 LSM11P83369 360 aaKnown RBP eCLIP8.63□□□□□ -1.03
PDZD8-202ENST00000482496 HCSTQ9UBK5 93 aa8.61□□□□□ -1.03
PDZD8-202ENST00000482496 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
PDZD8-202ENST00000482496 PBX2P40425 430 aa8.58□□□□□ -1.04
PDZD8-202ENST00000482496 ZNF316A6NFI3 1004 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms