RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 PKD2Q13563 968 aa17.73■□□□□ 0.43
PDCD4-206ENST00000481353 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
PDCD4-206ENST00000481353 CCDC61Q9Y6R9 512 aa17.67■□□□□ 0.42
PDCD4-206ENST00000481353 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
PDCD4-206ENST00000481353 POTEIP0CG38 1075 aa17.63■□□□□ 0.41
PDCD4-206ENST00000481353 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
PDCD4-206ENST00000481353 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
PDCD4-206ENST00000481353 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
PDCD4-206ENST00000481353 KLHL34Q8N239 644 aa17.55■□□□□ 0.4
PDCD4-206ENST00000481353 SPOCK2Q92563 424 aa17.55■□□□□ 0.4
PDCD4-206ENST00000481353 MS4A3Q96HJ5 214 aa17.54■□□□□ 0.4
PDCD4-206ENST00000481353 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.4
PDCD4-206ENST00000481353 KIF12Q96FN5 646 aa17.51■□□□□ 0.39
PDCD4-206ENST00000481353 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
PDCD4-206ENST00000481353 MAP3K13O43283 966 aa17.47■□□□□ 0.39
PDCD4-206ENST00000481353 FAM212AQ96EL1 285 aa17.42■□□□□ 0.38
PDCD4-206ENST00000481353 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
PDCD4-206ENST00000481353 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
PDCD4-206ENST00000481353 PYGBP11216 843 aa17.37■□□□□ 0.37
PDCD4-206ENST00000481353 CLCN6P51797 869 aa17.36■□□□□ 0.37
PDCD4-206ENST00000481353 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
PDCD4-206ENST00000481353 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
PDCD4-206ENST00000481353 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
PDCD4-206ENST00000481353 DCBLD2Q96PD2 775 aa17.33■□□□□ 0.36
PDCD4-206ENST00000481353 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
PDCD4-206ENST00000481353 IFNL1Q8IU54 200 aa17.3■□□□□ 0.36
PDCD4-206ENST00000481353 PCDHB13Q9Y5F0 798 aa17.28■□□□□ 0.36
PDCD4-206ENST00000481353 BCANQ96GW7 911 aa17.26■□□□□ 0.35
PDCD4-206ENST00000481353 ATMINO43313 823 aaPredicted RBP17.24■□□□□ 0.35
PDCD4-206ENST00000481353 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
PDCD4-206ENST00000481353 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
PDCD4-206ENST00000481353 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
PDCD4-206ENST00000481353 RGL2O15211 777 aa17.21■□□□□ 0.35
PDCD4-206ENST00000481353 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
PDCD4-206ENST00000481353 ATN1P54259 1190 aaPredicted RBP17.2■□□□□ 0.34
PDCD4-206ENST00000481353 GSE1Q14687 1217 aa17.19■□□□□ 0.34
PDCD4-206ENST00000481353 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
PDCD4-206ENST00000481353 TTLL13PA6NNM8 815 aa17.13■□□□□ 0.33
PDCD4-206ENST00000481353 SGIP1Q9BQI5 828 aa17.13■□□□□ 0.33
PDCD4-206ENST00000481353 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
PDCD4-206ENST00000481353 TIE1P35590 1138 aa17.08■□□□□ 0.32
PDCD4-206ENST00000481353 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
PDCD4-206ENST00000481353 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
PDCD4-206ENST00000481353 CHRM1P11229 460 aaPredicted RBP17.07■□□□□ 0.32
PDCD4-206ENST00000481353 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
PDCD4-206ENST00000481353 TRIM41Q8WV44 630 aa17.04■□□□□ 0.32
PDCD4-206ENST00000481353 POTEFA5A3E0 1075 aa17.03■□□□□ 0.32
PDCD4-206ENST00000481353 LHX8Q68G74 356 aa17.03■□□□□ 0.32
PDCD4-206ENST00000481353 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
PDCD4-206ENST00000481353 METRNQ9UJH8 293 aa17.01■□□□□ 0.31
PDCD4-206ENST00000481353 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
PDCD4-206ENST00000481353 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
PDCD4-206ENST00000481353 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
PDCD4-206ENST00000481353 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
PDCD4-206ENST00000481353 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
PDCD4-206ENST00000481353 COLQQ9Y215 455 aaPredicted RBP16.95■□□□□ 0.3
PDCD4-206ENST00000481353 ZNF467Q7Z7K2 595 aaPredicted RBP16.92■□□□□ 0.3
PDCD4-206ENST00000481353 SLC39A7Q92504 469 aa16.92■□□□□ 0.3
PDCD4-206ENST00000481353 C7P10643 843 aa16.89■□□□□ 0.29
PDCD4-206ENST00000481353 PSEN1P49768 467 aa16.89■□□□□ 0.29
PDCD4-206ENST00000481353 TSHZ2Q9NRE2 1034 aa16.88■□□□□ 0.29
PDCD4-206ENST00000481353 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
PDCD4-206ENST00000481353 HS6ST3Q8IZP7 471 aa16.87■□□□□ 0.29
PDCD4-206ENST00000481353 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
PDCD4-206ENST00000481353 PDAP1Q13442 181 aaKnown RBP16.8■□□□□ 0.28
PDCD4-206ENST00000481353 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
PDCD4-206ENST00000481353 IRX5P78411 483 aaPredicted RBP16.77■□□□□ 0.28
PDCD4-206ENST00000481353 RIOK3O14730 519 aaKnown RBP16.75■□□□□ 0.27
PDCD4-206ENST00000481353 IER5LQ5T953 404 aa16.73■□□□□ 0.27
PDCD4-206ENST00000481353 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
PDCD4-206ENST00000481353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
PDCD4-206ENST00000481353 SEC24BO95487 1268 aa16.7■□□□□ 0.26
PDCD4-206ENST00000481353 ZFP91Q96JP5 570 aaPredicted RBP16.7■□□□□ 0.26
PDCD4-206ENST00000481353 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
PDCD4-206ENST00000481353 PDCD7Q8N8D1 485 aaKnown RBP16.67■□□□□ 0.26
PDCD4-206ENST00000481353 PLCG2P16885 1265 aa16.61■□□□□ 0.25
PDCD4-206ENST00000481353 EFCAB3Q8N7B9 438 aa16.61■□□□□ 0.25
PDCD4-206ENST00000481353 VGFO15240 615 aaPredicted RBP16.6■□□□□ 0.25
PDCD4-206ENST00000481353 NKX1-1Q15270 411 aaPredicted RBP16.6■□□□□ 0.25
PDCD4-206ENST00000481353 DPY19L2Q6NUT2 758 aa16.6■□□□□ 0.25
PDCD4-206ENST00000481353 OCEL1Q9H607 264 aa16.6■□□□□ 0.25
PDCD4-206ENST00000481353 MKRN3Q13064 507 aaKnown RBP16.58■□□□□ 0.24
PDCD4-206ENST00000481353 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.24
PDCD4-206ENST00000481353 GOLGA2Q08379 1002 aa16.56■□□□□ 0.24
PDCD4-206ENST00000481353 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.248e-8■□□□□ 10.9
PDCD4-206ENST00000481353 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
PDCD4-206ENST00000481353 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
PDCD4-206ENST00000481353 NBR1Q14596 966 aa16.52■□□□□ 0.24
PDCD4-206ENST00000481353 STK25O00506 426 aa16.51■□□□□ 0.23
PDCD4-206ENST00000481353 MS4A4AQ96JQ5 239 aa16.47■□□□□ 0.23
PDCD4-206ENST00000481353 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
PDCD4-206ENST00000481353 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
PDCD4-206ENST00000481353 SCUBE2Q9NQ36 999 aa16.42■□□□□ 0.22
PDCD4-206ENST00000481353 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
PDCD4-206ENST00000481353 RYDENQ9NUL5 291 aaKnown RBP16.4■□□□□ 0.22
PDCD4-206ENST00000481353 MFRPQ9BY79 579 aa16.37■□□□□ 0.21
PDCD4-206ENST00000481353 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
PDCD4-206ENST00000481353 LCE2DQ5TA82 110 aaPredicted RBP16.34■□□□□ 0.21
PDCD4-206ENST00000481353 SLAIN1Q8ND83 568 aa16.32■□□□□ 0.2
PDCD4-206ENST00000481353 SOX12O15370 315 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms