RNA–Protein interactions for RNA: ENST00000480283.5

ATRX-206, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 10,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-206ENST00000480283 MAP3K1Q13233 1512 aa5.17□□□□□ -1.58
ATRX-206ENST00000480283 MTUS2Q5JR59 1369 aa5.17□□□□□ -1.58
ATRX-206ENST00000480283 NEFLP07196 543 aa5.16□□□□□ -1.58
ATRX-206ENST00000480283 KIF27Q86VH2 1401 aa5.16□□□□□ -1.58
ATRX-206ENST00000480283 IRX6P78412 446 aaPredicted RBP5.15□□□□□ -1.59
ATRX-206ENST00000480283 RGL3Q3MIN7 710 aa5.15□□□□□ -1.59
ATRX-206ENST00000480283 ANP32CO43423 234 aa5.15□□□□□ -1.59
ATRX-206ENST00000480283 FOXD1Q16676 465 aa5.15□□□□□ -1.59
ATRX-206ENST00000480283 CDK11AQ9UQ88 783 aaPredicted RBP5.14□□□□□ -1.59
ATRX-206ENST00000480283 CADPSQ9ULU8 1353 aa5.14□□□□□ -1.59
ATRX-206ENST00000480283 CEP164Q9UPV0 1460 aa5.14□□□□□ -1.59
ATRX-206ENST00000480283 FAM9BQ8IZU0 186 aa5.13□□□□□ -1.59
ATRX-206ENST00000480283 HMGXB3Q12766 1538 aa5.13□□□□□ -1.59
ATRX-206ENST00000480283 ERCC6Q03468 1493 aa5.13□□□□□ -1.59
ATRX-206ENST00000480283 ERICH6Q7L0X2 663 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 BCL11AQ9H165 835 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 PLEKHD1A6NEE1 506 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 TSPY4P0CV99 314 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 TSPY10P0CW01 314 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 TIMELESSQ9UNS1 1208 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 RAPGEF2Q9Y4G8 1499 aa5.12□□□□□ -1.59
ATRX-206ENST00000480283 TONSLQ96HA7 1378 aa5.11□□□□□ -1.59
ATRX-206ENST00000480283 FKBP8Q14318 412 aa5.11□□□□□ -1.59
ATRX-206ENST00000480283 NPM1P06748 294 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATRX-206ENST00000480283 TOP2AP11388 1531 aaKnown RBP5.1□□□□□ -1.59
ATRX-206ENST00000480283 CFDP1Q9UEE9 299 aaPredicted RBP5.1□□□□□ -1.59
ATRX-206ENST00000480283 CFAP65Q6ZU64 1925 aaKnown RBP5.1□□□□□ -1.59
ATRX-206ENST00000480283 THOC2Q8NI27 1593 aaKnown RBP5.1□□□□□ -1.59
ATRX-206ENST00000480283 IL27Q8NEV9 243 aa5.1□□□□□ -1.59
ATRX-206ENST00000480283 IGF1RP08069 1367 aa5.09□□□□□ -1.59
ATRX-206ENST00000480283 RAD54L2Q9Y4B4 1467 aa5.09□□□□□ -1.59
ATRX-206ENST00000480283 FHOD3Q2V2M9 1422 aa5.09□□□□□ -1.6
ATRX-206ENST00000480283 EIF4G1Q04637 1599 aaKnown RBP5.08□□□□□ -1.6
ATRX-206ENST00000480283 HNRNPUQ00839 825 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATRX-206ENST00000480283 ERICH3Q5RHP9 1530 aa5.08□□□□□ -1.6
ATRX-206ENST00000480283 HNRNPMP52272 730 aaKnown RBP eCLIP5.08□□□□□ -1.61e-7■■■■■ 32.5
ATRX-206ENST00000480283 PLEKHG5O94827 1062 aa5.07□□□□□ -1.6
ATRX-206ENST00000480283 JPH4Q96JJ6 628 aa5.07□□□□□ -1.6
ATRX-206ENST00000480283 CCNB3Q8WWL7 1395 aa5.06□□□□□ -1.6
ATRX-206ENST00000480283 VPS8Q8N3P4 1428 aa5.06□□□□□ -1.6
ATRX-206ENST00000480283 NESP48681 1621 aa5.06□□□□□ -1.6
ATRX-206ENST00000480283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATRX-206ENST00000480283 FANCD2Q9BXW9 1451 aa5.05□□□□□ -1.6
ATRX-206ENST00000480283 PDS5BQ9NTI5 1447 aa5.04□□□□□ -1.6
ATRX-206ENST00000480283 ZNF644Q9H582 1327 aaPredicted RBP5.04□□□□□ -1.6
ATRX-206ENST00000480283 SMARCA4P51532 1647 aa5.04□□□□□ -1.6
ATRX-206ENST00000480283 EIF4G2P78344 907 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATRX-206ENST00000480283 STAG3Q9UJ98 1225 aa5.04□□□□□ -1.6
ATRX-206ENST00000480283 RAB3GAP2Q9H2M9 1393 aa5.04□□□□□ -1.6
ATRX-206ENST00000480283 AKNAQ7Z591 1439 aa5.04□□□□□ -1.6
ATRX-206ENST00000480283 PRKCSHP14314 528 aaPredicted RBP5.04□□□□□ -1.6
ATRX-206ENST00000480283 AQRO60306 1485 aaKnown RBP eCLIP5.04□□□□□ -1.64e-6■□□□□ 10.6
ATRX-206ENST00000480283 POLR1AO95602 1720 aaPredicted RBP5.03□□□□□ -1.6
ATRX-206ENST00000480283 HSPA5P11021 654 aaKnown RBP5.03□□□□□ -1.6
ATRX-206ENST00000480283 MLECQ14165 292 aa5.03□□□□□ -1.6
ATRX-206ENST00000480283 NCAPD3P42695 1498 aa5.03□□□□□ -1.6
ATRX-206ENST00000480283 CACNA1FO60840 1977 aa5.03□□□□□ -1.6
ATRX-206ENST00000480283 MPHOSPH9Q99550 1183 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 MRS2Q9HD23 443 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 KIF21BO75037 1637 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 GGT6Q6P531 493 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 DCAF11Q8TEB1 546 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 CARD11Q9BXL7 1154 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 PKD2Q13563 968 aa5.02□□□□□ -1.61
ATRX-206ENST00000480283 NUTM2DQ5VT03 806 aaPredicted RBP5.01□□□□□ -1.61
ATRX-206ENST00000480283 FGD5Q6ZNL6 1462 aa5.01□□□□□ -1.61
ATRX-206ENST00000480283 CUL7Q14999 1698 aa5.01□□□□□ -1.61
ATRX-206ENST00000480283 KAT6BQ8WYB5 2073 aa5.01□□□□□ -1.61
ATRX-206ENST00000480283 CC2D2AQ9P2K1 1620 aa5.01□□□□□ -1.61
ATRX-206ENST00000480283 TMC1Q8TDI8 760 aa5.01□□□□□ -1.61
ATRX-206ENST00000480283 DHX57Q6P158 1386 aaKnown RBP5□□□□□ -1.61
ATRX-206ENST00000480283 PPP1R15AO75807 674 aaPredicted RBP5□□□□□ -1.61
ATRX-206ENST00000480283 NPM2Q86SE8 214 aaKnown RBP5□□□□□ -1.61
ATRX-206ENST00000480283 SUPT16HQ9Y5B9 1047 aaKnown RBP5□□□□□ -1.61
ATRX-206ENST00000480283 SETD5Q9C0A6 1442 aa5□□□□□ -1.61
ATRX-206ENST00000480283 CC2D1BQ5T0F9 858 aaKnown RBP4.99□□□□□ -1.61
ATRX-206ENST00000480283 L3MBTL2Q969R5 705 aa4.99□□□□□ -1.61
ATRX-206ENST00000480283 ZMYM4Q5VZL5 1548 aa4.99□□□□□ -1.61
ATRX-206ENST00000480283 SAFB2Q14151 953 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATRX-206ENST00000480283 ESF1Q9H501 851 aaKnown RBP4.99□□□□□ -1.61
ATRX-206ENST00000480283 BIVM-ERCC5R4GMW8 1640 aa4.98□□□□□ -1.61
ATRX-206ENST00000480283 UNC13AQ9UPW8 1703 aa4.98□□□□□ -1.61
ATRX-206ENST00000480283 PHLDB1Q86UU1 1377 aa4.98□□□□□ -1.61
ATRX-206ENST00000480283 TNNT2P45379 298 aaPredicted RBP4.98□□□□□ -1.61
ATRX-206ENST00000480283 CYB5RLQ6IPT4 315 aa4.98□□□□□ -1.61
ATRX-206ENST00000480283 FHAD1B1AJZ9 1412 aa4.97□□□□□ -1.61
ATRX-206ENST00000480283 EIF5BO60841 1220 aaKnown RBP4.97□□□□□ -1.61
ATRX-206ENST00000480283 ZBTB7CA1YPR0 619 aa4.96□□□□□ -1.61
ATRX-206ENST00000480283 KIF3BO15066 747 aa4.96□□□□□ -1.61
ATRX-206ENST00000480283 STAC3Q96MF2 364 aa4.96□□□□□ -1.61
ATRX-206ENST00000480283 TRHP20396 242 aaPredicted RBP4.96□□□□□ -1.62
ATRX-206ENST00000480283 NEUROD2Q15784 382 aa4.96□□□□□ -1.62
ATRX-206ENST00000480283 BICRAQ9NZM4 1560 aa4.96□□□□□ -1.62
ATRX-206ENST00000480283 ARAP1Q96P48 1450 aa4.96□□□□□ -1.62
ATRX-206ENST00000480283 FAM135AQ9P2D6 1515 aa4.96□□□□□ -1.62
ATRX-206ENST00000480283 CCDC144AA2RUR9 1427 aa4.95□□□□□ -1.62
ATRX-206ENST00000480283 STK26Q9P289 416 aa4.95□□□□□ -1.62
ATRX-206ENST00000480283 CFTRP13569 1480 aa4.95□□□□□ -1.62
ATRX-206ENST00000480283 SYNJ1O43426 1573 aa4.95□□□□□ -1.62
ATRX-206ENST00000480283 EFCAB5A4FU69 1503 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms