RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 CLASP1Q7Z460 1538 aa14.68□□□□□ -0.06
NUDCD3-208ENST00000480209 IQGAP2Q13576 1575 aa14.68□□□□□ -0.06
NUDCD3-208ENST00000480209 FBLN2P98095 1184 aa14.67□□□□□ -0.06
NUDCD3-208ENST00000480209 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
NUDCD3-208ENST00000480209 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
NUDCD3-208ENST00000480209 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
NUDCD3-208ENST00000480209 KIAA0586Q9BVV6 1533 aa14.62□□□□□ -0.07
NUDCD3-208ENST00000480209 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-208ENST00000480209 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
NUDCD3-208ENST00000480209 UGGT2Q9NYU1 1516 aa14.59□□□□□ -0.07
NUDCD3-208ENST00000480209 CEP162Q5TB80 1403 aa14.58□□□□□ -0.07
NUDCD3-208ENST00000480209 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
NUDCD3-208ENST00000480209 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
NUDCD3-208ENST00000480209 DISP1Q96F81 1524 aa14.55□□□□□ -0.08
NUDCD3-208ENST00000480209 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
NUDCD3-208ENST00000480209 EFCAB5A4FU69 1503 aa14.54□□□□□ -0.08
NUDCD3-208ENST00000480209 ARAP1Q96P48 1450 aa14.52□□□□□ -0.08
NUDCD3-208ENST00000480209 CLIP1P30622 1438 aa14.52□□□□□ -0.08
NUDCD3-208ENST00000480209 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
NUDCD3-208ENST00000480209 OSCARQ8IYS5 282 aa14.48□□□□□ -0.09
NUDCD3-208ENST00000480209 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
NUDCD3-208ENST00000480209 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
NUDCD3-208ENST00000480209 JPH4Q96JJ6 628 aa14.45□□□□□ -0.1
NUDCD3-208ENST00000480209 PCF11O94913 1555 aaKnown RBP14.43□□□□□ -0.1
NUDCD3-208ENST00000480209 ARHGEF11O15085 1522 aa14.42□□□□□ -0.1
NUDCD3-208ENST00000480209 RIMBP3CA6NJZ7 1639 aa14.42□□□□□ -0.1
NUDCD3-208ENST00000480209 RIMBP3BA6NNM3 1639 aa14.42□□□□□ -0.1
NUDCD3-208ENST00000480209 RIMBP3Q9UFD9 1639 aa14.42□□□□□ -0.1
NUDCD3-208ENST00000480209 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
NUDCD3-208ENST00000480209 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
NUDCD3-208ENST00000480209 CARMIL2Q6F5E8 1435 aa14.4□□□□□ -0.1
NUDCD3-208ENST00000480209 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
NUDCD3-208ENST00000480209 ABCA8O94911 1581 aa14.35□□□□□ -0.11
NUDCD3-208ENST00000480209 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
NUDCD3-208ENST00000480209 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
NUDCD3-208ENST00000480209 HECW1Q76N89 1606 aa14.33□□□□□ -0.12
NUDCD3-208ENST00000480209 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
NUDCD3-208ENST00000480209 CFAP43Q8NDM7 1665 aa14.32□□□□□ -0.12
NUDCD3-208ENST00000480209 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
NUDCD3-208ENST00000480209 ADCY10Q96PN6 1610 aa14.31□□□□□ -0.12
NUDCD3-208ENST00000480209 PTPRGP23470 1445 aa14.3□□□□□ -0.12
NUDCD3-208ENST00000480209 CASKIN1Q8WXD9 1431 aa14.3□□□□□ -0.12
NUDCD3-208ENST00000480209 TTBK1Q5TCY1 1321 aaPredicted RBP14.29□□□□□ -0.12
NUDCD3-208ENST00000480209 NUP153P49790 1475 aaKnown RBP14.29□□□□□ -0.12
NUDCD3-208ENST00000480209 ABCC2Q92887 1545 aa14.28□□□□□ -0.12
NUDCD3-208ENST00000480209 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
NUDCD3-208ENST00000480209 CDK13Q14004 1512 aaKnown RBP14.27□□□□□ -0.12
NUDCD3-208ENST00000480209 ZCCHC11Q5TAX3 1644 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-208ENST00000480209 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
NUDCD3-208ENST00000480209 UACAQ9BZF9 1416 aa14.24□□□□□ -0.13
NUDCD3-208ENST00000480209 UHRF1BP1LA0JNW5 1464 aa14.24□□□□□ -0.13
NUDCD3-208ENST00000480209 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
NUDCD3-208ENST00000480209 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.13
NUDCD3-208ENST00000480209 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
NUDCD3-208ENST00000480209 KDM5BQ9UGL1 1544 aa14.19□□□□□ -0.14
NUDCD3-208ENST00000480209 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
NUDCD3-208ENST00000480209 ATP10BO94823 1461 aa14.18□□□□□ -0.14
NUDCD3-208ENST00000480209 ARID3CA6NKF2 412 aa14.17□□□□□ -0.14
NUDCD3-208ENST00000480209 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
NUDCD3-208ENST00000480209 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
NUDCD3-208ENST00000480209 KIF14Q15058 1648 aa14.13□□□□□ -0.15
NUDCD3-208ENST00000480209 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
NUDCD3-208ENST00000480209 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
NUDCD3-208ENST00000480209 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
NUDCD3-208ENST00000480209 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
NUDCD3-208ENST00000480209 SUPT6HQ7KZ85 1726 aaKnown RBP14.08□□□□□ -0.16
NUDCD3-208ENST00000480209 MAPKBP1O60336 1514 aa14.08□□□□□ -0.16
NUDCD3-208ENST00000480209 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-208ENST00000480209 TROQ12816 1431 aaPredicted RBP14.07□□□□□ -0.16
NUDCD3-208ENST00000480209 TTC37Q6PGP7 1564 aa14.06□□□□□ -0.16
NUDCD3-208ENST00000480209 ASXL2Q76L83 1435 aa14.06□□□□□ -0.16
NUDCD3-208ENST00000480209 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
NUDCD3-208ENST00000480209 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
NUDCD3-208ENST00000480209 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
NUDCD3-208ENST00000480209 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
NUDCD3-208ENST00000480209 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.02□□□□□ -0.16
NUDCD3-208ENST00000480209 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
NUDCD3-208ENST00000480209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
NUDCD3-208ENST00000480209 APLP2Q06481 763 aa14.02□□□□□ -0.17
NUDCD3-208ENST00000480209 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
NUDCD3-208ENST00000480209 DIP2BQ9P265 1576 aa14.01□□□□□ -0.17
NUDCD3-208ENST00000480209 ABCC10Q5T3U5 1492 aa14.01□□□□□ -0.17
NUDCD3-208ENST00000480209 ABCA9Q8IUA7 1624 aa14.01□□□□□ -0.17
NUDCD3-208ENST00000480209 MYO5CQ9NQX4 1742 aa14□□□□□ -0.17
NUDCD3-208ENST00000480209 CDC42BPBQ9Y5S2 1711 aa14□□□□□ -0.17
NUDCD3-208ENST00000480209 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
NUDCD3-208ENST00000480209 PREX2Q70Z35 1606 aa14□□□□□ -0.17
NUDCD3-208ENST00000480209 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
NUDCD3-208ENST00000480209 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
NUDCD3-208ENST00000480209 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
NUDCD3-208ENST00000480209 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
NUDCD3-208ENST00000480209 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
NUDCD3-208ENST00000480209 GLI2P10070 1586 aa13.95□□□□□ -0.18
NUDCD3-208ENST00000480209 PPRC1Q5VV67 1664 aaKnown RBP13.95□□□□□ -0.18
NUDCD3-208ENST00000480209 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
NUDCD3-208ENST00000480209 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
NUDCD3-208ENST00000480209 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
NUDCD3-208ENST00000480209 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
NUDCD3-208ENST00000480209 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
NUDCD3-208ENST00000480209 SAMD9LQ8IVG5 1584 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms