RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
CD46-214ENST00000480003 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
CD46-214ENST00000480003 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.14
CD46-214ENST00000480003 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
CD46-214ENST00000480003 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
CD46-214ENST00000480003 EEA1Q15075 1411 aa15.93■□□□□ 0.14
CD46-214ENST00000480003 FAM9AQ8IZU1 332 aaPredicted RBP15.91■□□□□ 0.14
CD46-214ENST00000480003 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
CD46-214ENST00000480003 SNAPC4Q5SXM2 1469 aa15.88■□□□□ 0.13
CD46-214ENST00000480003 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
CD46-214ENST00000480003 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
CD46-214ENST00000480003 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
CD46-214ENST00000480003 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
CD46-214ENST00000480003 FBLN2P98095 1184 aa15.84■□□□□ 0.13
CD46-214ENST00000480003 OSCARQ8IYS5 282 aa15.84■□□□□ 0.13
CD46-214ENST00000480003 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
CD46-214ENST00000480003 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
CD46-214ENST00000480003 PRXQ9BXM0 1461 aa15.83■□□□□ 0.12
CD46-214ENST00000480003 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
CD46-214ENST00000480003 RAPGEF2Q9Y4G8 1499 aa15.78■□□□□ 0.12
CD46-214ENST00000480003 ADAMTS12P58397 1594 aa15.78■□□□□ 0.12
CD46-214ENST00000480003 CUL7Q14999 1698 aa15.76■□□□□ 0.11
CD46-214ENST00000480003 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
CD46-214ENST00000480003 CAPN15O75808 1086 aa15.73■□□□□ 0.11
CD46-214ENST00000480003 NUP160Q12769 1436 aa15.71■□□□□ 0.11
CD46-214ENST00000480003 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
CD46-214ENST00000480003 CHD1O14646 1710 aa15.68■□□□□ 0.1
CD46-214ENST00000480003 KIF21BO75037 1637 aa15.66■□□□□ 0.1
CD46-214ENST00000480003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
CD46-214ENST00000480003 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
CD46-214ENST00000480003 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
CD46-214ENST00000480003 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
CD46-214ENST00000480003 KIAA0586Q9BVV6 1533 aa15.64■□□□□ 0.09
CD46-214ENST00000480003 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
CD46-214ENST00000480003 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
CD46-214ENST00000480003 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
CD46-214ENST00000480003 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
CD46-214ENST00000480003 APLP2Q06481 763 aa15.61■□□□□ 0.09
CD46-214ENST00000480003 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
CD46-214ENST00000480003 DSG3P32926 999 aa15.6■□□□□ 0.09
CD46-214ENST00000480003 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
CD46-214ENST00000480003 FOXD4L1Q9NU39 408 aa15.58■□□□□ 0.08
CD46-214ENST00000480003 TNIKQ9UKE5 1360 aa15.58■□□□□ 0.08
CD46-214ENST00000480003 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
CD46-214ENST00000480003 IQGAP2Q13576 1575 aa15.51■□□□□ 0.07
CD46-214ENST00000480003 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
CD46-214ENST00000480003 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
CD46-214ENST00000480003 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
CD46-214ENST00000480003 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
CD46-214ENST00000480003 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
CD46-214ENST00000480003 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
CD46-214ENST00000480003 UGGT2Q9NYU1 1516 aa15.49■□□□□ 0.07
CD46-214ENST00000480003 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
CD46-214ENST00000480003 ZBTB22O15209 634 aa15.46■□□□□ 0.07
CD46-214ENST00000480003 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
CD46-214ENST00000480003 CYB5RLQ6IPT4 315 aa15.46■□□□□ 0.07
CD46-214ENST00000480003 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
CD46-214ENST00000480003 DISP1Q96F81 1524 aa15.46■□□□□ 0.07
CD46-214ENST00000480003 CARMIL2Q6F5E8 1435 aa15.44■□□□□ 0.06
CD46-214ENST00000480003 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
CD46-214ENST00000480003 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
CD46-214ENST00000480003 ABCB7O75027 752 aa15.41■□□□□ 0.06
CD46-214ENST00000480003 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
CD46-214ENST00000480003 PTPRGP23470 1445 aa15.38■□□□□ 0.05
CD46-214ENST00000480003 CLIP1P30622 1438 aa15.38■□□□□ 0.05
CD46-214ENST00000480003 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
CD46-214ENST00000480003 SAMD9Q5K651 1589 aa15.36■□□□□ 0.05
CD46-214ENST00000480003 KIAA0556O60303 1618 aa15.35■□□□□ 0.05
CD46-214ENST00000480003 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
CD46-214ENST00000480003 FHOD3Q2V2M9 1422 aa15.34■□□□□ 0.05
CD46-214ENST00000480003 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
CD46-214ENST00000480003 TTBK1Q5TCY1 1321 aaPredicted RBP15.32■□□□□ 0.04
CD46-214ENST00000480003 UACAQ9BZF9 1416 aa15.27■□□□□ 0.04
CD46-214ENST00000480003 FMN1Q68DA7 1419 aa15.26■□□□□ 0.03
CD46-214ENST00000480003 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
CD46-214ENST00000480003 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
CD46-214ENST00000480003 UHRF1BP1LA0JNW5 1464 aa15.23■□□□□ 0.03
CD46-214ENST00000480003 ABCA8O94911 1581 aa15.22■□□□□ 0.03
CD46-214ENST00000480003 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
CD46-214ENST00000480003 VPS8Q8N3P4 1428 aa15.18■□□□□ 0.02
CD46-214ENST00000480003 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
CD46-214ENST00000480003 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
CD46-214ENST00000480003 ATP10BO94823 1461 aa15.16■□□□□ 0.02
CD46-214ENST00000480003 POLA2Q14181 598 aa15.16■□□□□ 0.02
CD46-214ENST00000480003 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
CD46-214ENST00000480003 KDM5BQ9UGL1 1544 aa15.16■□□□□ 0.02
CD46-214ENST00000480003 NUP153P49790 1475 aaKnown RBP15.15■□□□□ 0.02
CD46-214ENST00000480003 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
CD46-214ENST00000480003 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
CD46-214ENST00000480003 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
CD46-214ENST00000480003 FYCO1Q9BQS8 1478 aa15.11■□□□□ 0.01
CD46-214ENST00000480003 EPRSP07814 1512 aaKnown RBP15.1■□□□□ 0.01
CD46-214ENST00000480003 PLEKHD1A6NEE1 506 aa15.09■□□□□ 0.01
CD46-214ENST00000480003 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
CD46-214ENST00000480003 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
CD46-214ENST00000480003 HECW1Q76N89 1606 aa15.06■□□□□ 0
CD46-214ENST00000480003 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
CD46-214ENST00000480003 CCDC18Q5T9S5 1454 aa15.04■□□□□ -0
CD46-214ENST00000480003 ASXL2Q76L83 1435 aa15.04■□□□□ -0
CD46-214ENST00000480003 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms