RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
TRAPPC12-219ENST00000479955 CTTNBP2Q8WZ74 1663 aa19.03■□□□□ 0.64
TRAPPC12-219ENST00000479955 IQGAP2Q13576 1575 aa18.99■□□□□ 0.63
TRAPPC12-219ENST00000479955 TNIKQ9UKE5 1360 aa18.99■□□□□ 0.63
TRAPPC12-219ENST00000479955 LOC105371045A0A1W2PR82 267 aa18.99■□□□□ 0.63
TRAPPC12-219ENST00000479955 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
TRAPPC12-219ENST00000479955 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
TRAPPC12-219ENST00000479955 SHROOM2Q13796 1616 aa18.9■□□□□ 0.62
TRAPPC12-219ENST00000479955 UGGT2Q9NYU1 1516 aa18.9■□□□□ 0.62
TRAPPC12-219ENST00000479955 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
TRAPPC12-219ENST00000479955 PRG4Q92954 1404 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC12-219ENST00000479955 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC12-219ENST00000479955 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
TRAPPC12-219ENST00000479955 CLIP1P30622 1438 aa18.81■□□□□ 0.6
TRAPPC12-219ENST00000479955 CEP162Q5TB80 1403 aa18.8■□□□□ 0.6
TRAPPC12-219ENST00000479955 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
TRAPPC12-219ENST00000479955 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
TRAPPC12-219ENST00000479955 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
TRAPPC12-219ENST00000479955 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
TRAPPC12-219ENST00000479955 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
TRAPPC12-219ENST00000479955 P3H3Q8IVL6 736 aa18.75■□□□□ 0.59
TRAPPC12-219ENST00000479955 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
TRAPPC12-219ENST00000479955 PTPRGP23470 1445 aa18.72■□□□□ 0.59
TRAPPC12-219ENST00000479955 ERCC6L2Q5T890 1561 aa18.72■□□□□ 0.59
TRAPPC12-219ENST00000479955 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.58
TRAPPC12-219ENST00000479955 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.58
TRAPPC12-219ENST00000479955 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.58
TRAPPC12-219ENST00000479955 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
TRAPPC12-219ENST00000479955 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
TRAPPC12-219ENST00000479955 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC12-219ENST00000479955 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
TRAPPC12-219ENST00000479955 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
TRAPPC12-219ENST00000479955 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
TRAPPC12-219ENST00000479955 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
TRAPPC12-219ENST00000479955 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
TRAPPC12-219ENST00000479955 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
TRAPPC12-219ENST00000479955 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
TRAPPC12-219ENST00000479955 ABCA8O94911 1581 aa18.55■□□□□ 0.56
TRAPPC12-219ENST00000479955 PLB1Q6P1J6 1458 aa18.54■□□□□ 0.56
TRAPPC12-219ENST00000479955 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
TRAPPC12-219ENST00000479955 ATP1B4Q9UN42 357 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC12-219ENST00000479955 ABCC2Q92887 1545 aa18.53■□□□□ 0.56
TRAPPC12-219ENST00000479955 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.55
TRAPPC12-219ENST00000479955 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
TRAPPC12-219ENST00000479955 ADCY10Q96PN6 1610 aa18.48■□□□□ 0.55
TRAPPC12-219ENST00000479955 PCF11O94913 1555 aaKnown RBP18.47■□□□□ 0.55
TRAPPC12-219ENST00000479955 APLP2Q06481 763 aa18.47■□□□□ 0.55
TRAPPC12-219ENST00000479955 NUP153P49790 1475 aaKnown RBP18.46■□□□□ 0.54
TRAPPC12-219ENST00000479955 CCDC18Q5T9S5 1454 aa18.46■□□□□ 0.54
TRAPPC12-219ENST00000479955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC12-219ENST00000479955 HNRNPUL2Q1KMD3 747 aaKnown RBP18.45■□□□□ 0.54
TRAPPC12-219ENST00000479955 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
TRAPPC12-219ENST00000479955 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC12-219ENST00000479955 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
TRAPPC12-219ENST00000479955 ATP10BO94823 1461 aa18.42■□□□□ 0.54
TRAPPC12-219ENST00000479955 MAP3K1Q13233 1512 aa18.39■□□□□ 0.54
TRAPPC12-219ENST00000479955 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.53
TRAPPC12-219ENST00000479955 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
TRAPPC12-219ENST00000479955 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
TRAPPC12-219ENST00000479955 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
TRAPPC12-219ENST00000479955 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
TRAPPC12-219ENST00000479955 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
TRAPPC12-219ENST00000479955 TIAM1Q13009 1591 aa18.33■□□□□ 0.52
TRAPPC12-219ENST00000479955 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
TRAPPC12-219ENST00000479955 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
TRAPPC12-219ENST00000479955 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
TRAPPC12-219ENST00000479955 WDR7Q9Y4E6 1490 aa18.28■□□□□ 0.52
TRAPPC12-219ENST00000479955 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC12-219ENST00000479955 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
TRAPPC12-219ENST00000479955 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
TRAPPC12-219ENST00000479955 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
TRAPPC12-219ENST00000479955 KANK4Q5T7N3 995 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC12-219ENST00000479955 KIF14Q15058 1648 aa18.2■□□□□ 0.5
TRAPPC12-219ENST00000479955 MAGI3Q5TCQ9 1506 aa18.2■□□□□ 0.5
TRAPPC12-219ENST00000479955 SUPT6HQ7KZ85 1726 aaKnown RBP18.19■□□□□ 0.5
TRAPPC12-219ENST00000479955 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
TRAPPC12-219ENST00000479955 GLI2P10070 1586 aa18.17■□□□□ 0.5
TRAPPC12-219ENST00000479955 FAM69CQ0P6D2 419 aa18.16■□□□□ 0.5
TRAPPC12-219ENST00000479955 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
TRAPPC12-219ENST00000479955 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
TRAPPC12-219ENST00000479955 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC12-219ENST00000479955 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
TRAPPC12-219ENST00000479955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC12-219ENST00000479955 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
TRAPPC12-219ENST00000479955 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
TRAPPC12-219ENST00000479955 CD109Q6YHK3 1445 aa18.1■□□□□ 0.49
TRAPPC12-219ENST00000479955 KIF13AQ9H1H9 1805 aa18.09■□□□□ 0.49
TRAPPC12-219ENST00000479955 MYO5CQ9NQX4 1742 aa18.07■□□□□ 0.48
TRAPPC12-219ENST00000479955 MAP3K4Q9Y6R4 1608 aa18.07■□□□□ 0.48
TRAPPC12-219ENST00000479955 TTC37Q6PGP7 1564 aa18.07■□□□□ 0.48
TRAPPC12-219ENST00000479955 PLCH2O75038 1416 aa18.06■□□□□ 0.48
TRAPPC12-219ENST00000479955 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
TRAPPC12-219ENST00000479955 ARAP3Q8WWN8 1544 aa18.06■□□□□ 0.48
TRAPPC12-219ENST00000479955 GPATCH8Q9UKJ3 1502 aaKnown RBP18.05■□□□□ 0.48
TRAPPC12-219ENST00000479955 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
TRAPPC12-219ENST00000479955 CFDP1Q9UEE9 299 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-219ENST00000479955 MYOM3Q5VTT5 1437 aa18.04■□□□□ 0.48
TRAPPC12-219ENST00000479955 CDC42BPAQ5VT25 1732 aa18.03■□□□□ 0.48
TRAPPC12-219ENST00000479955 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
TRAPPC12-219ENST00000479955 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms