RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ATMINO43313 823 aaPredicted RBP10.87□□□□□ -0.67
NF1-209ENST00000479536 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
NF1-209ENST00000479536 POTEMA6NI47 508 aa10.84□□□□□ -0.67
NF1-209ENST00000479536 C7P10643 843 aa10.84□□□□□ -0.67
NF1-209ENST00000479536 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
NF1-209ENST00000479536 PROM2Q8N271 834 aa10.81□□□□□ -0.68
NF1-209ENST00000479536 CCDC61Q9Y6R9 512 aa10.8□□□□□ -0.68
NF1-209ENST00000479536 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
NF1-209ENST00000479536 ATN1P54259 1190 aaPredicted RBP10.77□□□□□ -0.69
NF1-209ENST00000479536 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
NF1-209ENST00000479536 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
NF1-209ENST00000479536 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
NF1-209ENST00000479536 MIER1Q8N108 512 aa10.73□□□□□ -0.69
NF1-209ENST00000479536 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
NF1-209ENST00000479536 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
NF1-209ENST00000479536 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
NF1-209ENST00000479536 MAP3K13O43283 966 aa10.7□□□□□ -0.7
NF1-209ENST00000479536 RASEFQ8IZ41 740 aa10.69□□□□□ -0.7
NF1-209ENST00000479536 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
NF1-209ENST00000479536 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
NF1-209ENST00000479536 TIE1P35590 1138 aa10.65□□□□□ -0.7
NF1-209ENST00000479536 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
NF1-209ENST00000479536 LCE2DQ5TA82 110 aaPredicted RBP10.62□□□□□ -0.71
NF1-209ENST00000479536 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
NF1-209ENST00000479536 SEC24BO95487 1268 aa10.61□□□□□ -0.71
NF1-209ENST00000479536 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
NF1-209ENST00000479536 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
NF1-209ENST00000479536 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
NF1-209ENST00000479536 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
NF1-209ENST00000479536 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
NF1-209ENST00000479536 ZBTB47Q9UFB7 747 aaPredicted RBP10.52□□□□□ -0.73
NF1-209ENST00000479536 NUBP1P53384 320 aa10.5□□□□□ -0.73
NF1-209ENST00000479536 IER5LQ5T953 404 aa10.5□□□□□ -0.73
NF1-209ENST00000479536 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
NF1-209ENST00000479536 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
NF1-209ENST00000479536 TMEM106CQ9BVX2 250 aa10.46□□□□□ -0.73
NF1-209ENST00000479536 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
NF1-209ENST00000479536 PLCG2P16885 1265 aa10.42□□□□□ -0.74
NF1-209ENST00000479536 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
NF1-209ENST00000479536 FKBP8Q14318 412 aa10.38□□□□□ -0.75
NF1-209ENST00000479536 ST18O60284 1047 aa10.37□□□□□ -0.75
NF1-209ENST00000479536 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
NF1-209ENST00000479536 PYGBP11216 843 aa10.35□□□□□ -0.75
NF1-209ENST00000479536 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
NF1-209ENST00000479536 OCEL1Q9H607 264 aa10.31□□□□□ -0.76
NF1-209ENST00000479536 PCDHB8Q9UN66 801 aa10.31□□□□□ -0.76
NF1-209ENST00000479536 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
NF1-209ENST00000479536 SNPHO15079 494 aa10.23□□□□□ -0.77
NF1-209ENST00000479536 FBXO3Q9UK99 471 aa10.23□□□□□ -0.77
NF1-209ENST00000479536 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
NF1-209ENST00000479536 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
NF1-209ENST00000479536 MARVELD3Q96A59 401 aa10.2□□□□□ -0.78
NF1-209ENST00000479536 GOLGA2Q08379 1002 aa10.19□□□□□ -0.78
NF1-209ENST00000479536 MKRN3Q13064 507 aaKnown RBP10.17□□□□□ -0.78
NF1-209ENST00000479536 C3orf67Q6ZVT6 689 aa10.17□□□□□ -0.78
NF1-209ENST00000479536 GSE1Q14687 1217 aa10.16□□□□□ -0.78
NF1-209ENST00000479536 ZNF467Q7Z7K2 595 aaPredicted RBP10.16□□□□□ -0.78
NF1-209ENST00000479536 PDCD7Q8N8D1 485 aaKnown RBP10.16□□□□□ -0.78
NF1-209ENST00000479536 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
NF1-209ENST00000479536 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
NF1-209ENST00000479536 L3MBTL3Q96JM7 780 aaPredicted RBP10.13□□□□□ -0.79
NF1-209ENST00000479536 VASPP50552 380 aaPredicted RBP10.12□□□□□ -0.79
NF1-209ENST00000479536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■■■□□ 16.3
NF1-209ENST00000479536 PSEN1P49768 467 aa10.09□□□□□ -0.79
NF1-209ENST00000479536 EMP3P54852 163 aa10.09□□□□□ -0.79
NF1-209ENST00000479536 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
NF1-209ENST00000479536 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
NF1-209ENST00000479536 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
NF1-209ENST00000479536 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
NF1-209ENST00000479536 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
NF1-209ENST00000479536 POTEB3A0JP26 581 aa10□□□□□ -0.81
NF1-209ENST00000479536 POTEBQ6S5H4 581 aa10□□□□□ -0.81
NF1-209ENST00000479536 CABP2Q9NPB3 220 aa10□□□□□ -0.81
NF1-209ENST00000479536 G3V3G9 751 aa9.99□□□□□ -0.81
NF1-209ENST00000479536 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
NF1-209ENST00000479536 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
NF1-209ENST00000479536 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
NF1-209ENST00000479536 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
NF1-209ENST00000479536 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.82
NF1-209ENST00000479536 SPOCK2Q92563 424 aa9.94□□□□□ -0.82
NF1-209ENST00000479536 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
NF1-209ENST00000479536 IFNLR1Q8IU57 520 aaPredicted RBP9.91□□□□□ -0.82
NF1-209ENST00000479536 ZNF710Q8N1W2 664 aa9.91□□□□□ -0.82
NF1-209ENST00000479536 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
NF1-209ENST00000479536 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
NF1-209ENST00000479536 ERBB3P21860 1342 aa9.85□□□□□ -0.83
NF1-209ENST00000479536 EFCAB3Q8N7B9 438 aa9.83□□□□□ -0.84
NF1-209ENST00000479536 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
NF1-209ENST00000479536 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
NF1-209ENST00000479536 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
NF1-209ENST00000479536 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
NF1-209ENST00000479536 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
NF1-209ENST00000479536 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
NF1-209ENST00000479536 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
NF1-209ENST00000479536 MYT1LQ9UL68 1186 aa9.7□□□□□ -0.86
NF1-209ENST00000479536 SOX12O15370 315 aa9.69□□□□□ -0.86
NF1-209ENST00000479536 ZNF687Q8N1G0 1237 aa9.69□□□□□ -0.86
NF1-209ENST00000479536 RIOK3O14730 519 aaKnown RBP9.68□□□□□ -0.86
NF1-209ENST00000479536 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
NF1-209ENST00000479536 MS4A4AQ96JQ5 239 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms