RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
SSR1-207ENST00000479485 ATMINO43313 823 aaPredicted RBP13.4□□□□□ -0.26
SSR1-207ENST00000479485 C7P10643 843 aa13.4□□□□□ -0.26
SSR1-207ENST00000479485 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
SSR1-207ENST00000479485 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
SSR1-207ENST00000479485 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
SSR1-207ENST00000479485 SCUBE2Q9NQ36 999 aa13.31□□□□□ -0.28
SSR1-207ENST00000479485 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
SSR1-207ENST00000479485 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
SSR1-207ENST00000479485 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
SSR1-207ENST00000479485 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
SSR1-207ENST00000479485 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSR1-207ENST00000479485 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
SSR1-207ENST00000479485 TRPC6Q9Y210 931 aa13.07□□□□□ -0.32
SSR1-207ENST00000479485 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
SSR1-207ENST00000479485 FKBP8Q14318 412 aa13.05□□□□□ -0.32
SSR1-207ENST00000479485 ST18O60284 1047 aa13.04□□□□□ -0.32
SSR1-207ENST00000479485 SPNS2Q8IVW8 549 aa13.04□□□□□ -0.32
SSR1-207ENST00000479485 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
SSR1-207ENST00000479485 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
SSR1-207ENST00000479485 CCDC61Q9Y6R9 512 aa12.99□□□□□ -0.33
SSR1-207ENST00000479485 KIF12Q96FN5 646 aa12.98□□□□□ -0.33
SSR1-207ENST00000479485 SEC24BO95487 1268 aa12.91□□□□□ -0.34
SSR1-207ENST00000479485 TIE1P35590 1138 aa12.9□□□□□ -0.34
SSR1-207ENST00000479485 SLAIN1Q8ND83 568 aa12.9□□□□□ -0.34
SSR1-207ENST00000479485 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
SSR1-207ENST00000479485 MAP3K13O43283 966 aa12.86□□□□□ -0.35
SSR1-207ENST00000479485 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
SSR1-207ENST00000479485 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
SSR1-207ENST00000479485 IER5LQ5T953 404 aa12.74□□□□□ -0.37
SSR1-207ENST00000479485 MARVELD3Q96A59 401 aa12.74□□□□□ -0.37
SSR1-207ENST00000479485 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
SSR1-207ENST00000479485 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
SSR1-207ENST00000479485 PROM2Q8N271 834 aa12.64□□□□□ -0.39
SSR1-207ENST00000479485 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
SSR1-207ENST00000479485 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
SSR1-207ENST00000479485 PLCG2P16885 1265 aa12.58□□□□□ -0.4
SSR1-207ENST00000479485 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
SSR1-207ENST00000479485 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
SSR1-207ENST00000479485 SNPHO15079 494 aa12.56□□□□□ -0.4
SSR1-207ENST00000479485 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
SSR1-207ENST00000479485 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
SSR1-207ENST00000479485 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
SSR1-207ENST00000479485 EMP3P54852 163 aa12.5□□□□□ -0.41
SSR1-207ENST00000479485 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
SSR1-207ENST00000479485 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
SSR1-207ENST00000479485 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
SSR1-207ENST00000479485 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
SSR1-207ENST00000479485 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
SSR1-207ENST00000479485 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
SSR1-207ENST00000479485 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
SSR1-207ENST00000479485 MIER1Q8N108 512 aa12.37□□□□□ -0.43
SSR1-207ENST00000479485 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
SSR1-207ENST00000479485 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
SSR1-207ENST00000479485 NUBP1P53384 320 aa12.28□□□□□ -0.44
SSR1-207ENST00000479485 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
SSR1-207ENST00000479485 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
SSR1-207ENST00000479485 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
SSR1-207ENST00000479485 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
SSR1-207ENST00000479485 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
SSR1-207ENST00000479485 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
SSR1-207ENST00000479485 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
SSR1-207ENST00000479485 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
SSR1-207ENST00000479485 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
SSR1-207ENST00000479485 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
SSR1-207ENST00000479485 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
SSR1-207ENST00000479485 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
SSR1-207ENST00000479485 PYGBP11216 843 aa12.08□□□□□ -0.48
SSR1-207ENST00000479485 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
SSR1-207ENST00000479485 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
SSR1-207ENST00000479485 ERBB3P21860 1342 aa12.05□□□□□ -0.48
SSR1-207ENST00000479485 ZBTB47Q9UFB7 747 aaPredicted RBP12.02□□□□□ -0.49
SSR1-207ENST00000479485 SPOCK2Q92563 424 aa12□□□□□ -0.49
SSR1-207ENST00000479485 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
SSR1-207ENST00000479485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.494e-10■□□□□ 10.5
SSR1-207ENST00000479485 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
SSR1-207ENST00000479485 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
SSR1-207ENST00000479485 ZNF710Q8N1W2 664 aa11.96□□□□□ -0.49
SSR1-207ENST00000479485 DCAF8Q5TAQ9 597 aa11.95□□□□□ -0.5
SSR1-207ENST00000479485 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
SSR1-207ENST00000479485 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
SSR1-207ENST00000479485 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
SSR1-207ENST00000479485 DOK7Q18PE1 504 aa11.87□□□□□ -0.51
SSR1-207ENST00000479485 PKD2Q13563 968 aa11.85□□□□□ -0.51
SSR1-207ENST00000479485 PTGER2P43116 358 aa11.84□□□□□ -0.51
SSR1-207ENST00000479485 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
SSR1-207ENST00000479485 ANKRD13DQ6ZTN6 518 aa11.8□□□□□ -0.52
SSR1-207ENST00000479485 PLA2G2EQ9NZK7 142 aa11.8□□□□□ -0.52
SSR1-207ENST00000479485 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
SSR1-207ENST00000479485 ZNF467Q7Z7K2 595 aaPredicted RBP11.79□□□□□ -0.52
SSR1-207ENST00000479485 PSEN1P49768 467 aa11.78□□□□□ -0.52
SSR1-207ENST00000479485 G3V3G9 751 aa11.75□□□□□ -0.53
SSR1-207ENST00000479485 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
SSR1-207ENST00000479485 RIMBP2O15034 1052 aa11.74□□□□□ -0.53
SSR1-207ENST00000479485 GSE1Q14687 1217 aa11.73□□□□□ -0.53
SSR1-207ENST00000479485 GPR153Q6NV75 609 aa11.72□□□□□ -0.53
SSR1-207ENST00000479485 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
SSR1-207ENST00000479485 ZSWIM6Q9HCJ5 1215 aa11.67□□□□□ -0.54
SSR1-207ENST00000479485 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
SSR1-207ENST00000479485 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms