RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
CDKN1A-207ENST00000478800 KIAA0586Q9BVV6 1533 aa28.59■■■□□ 2.17
CDKN1A-207ENST00000478800 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
CDKN1A-207ENST00000478800 RAPGEF2Q9Y4G8 1499 aa28.54■■■□□ 2.16
CDKN1A-207ENST00000478800 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
CDKN1A-207ENST00000478800 CSRNP3Q8WYN3 585 aa28.38■■■□□ 2.13
CDKN1A-207ENST00000478800 IQGAP2Q13576 1575 aa28.37■■■□□ 2.13
CDKN1A-207ENST00000478800 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
CDKN1A-207ENST00000478800 EEA1Q15075 1411 aa28.35■■■□□ 2.13
CDKN1A-207ENST00000478800 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
CDKN1A-207ENST00000478800 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
CDKN1A-207ENST00000478800 TTBK1Q5TCY1 1321 aaPredicted RBP28.29■■■□□ 2.12
CDKN1A-207ENST00000478800 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
CDKN1A-207ENST00000478800 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
CDKN1A-207ENST00000478800 PTPRGP23470 1445 aa28.26■■■□□ 2.12
CDKN1A-207ENST00000478800 TNIKQ9UKE5 1360 aa28.25■■■□□ 2.11
CDKN1A-207ENST00000478800 UGGT2Q9NYU1 1516 aa28.21■■■□□ 2.11
CDKN1A-207ENST00000478800 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
CDKN1A-207ENST00000478800 CTTNBP2Q8WZ74 1663 aa28.16■■■□□ 2.1
CDKN1A-207ENST00000478800 GOLGA3Q08378 1498 aa28.13■■■□□ 2.09
CDKN1A-207ENST00000478800 ADCY10Q96PN6 1610 aa28.1■■■□□ 2.09
CDKN1A-207ENST00000478800 KIAA0556O60303 1618 aa28.09■■■□□ 2.09
CDKN1A-207ENST00000478800 UACAQ9BZF9 1416 aa28.05■■■□□ 2.08
CDKN1A-207ENST00000478800 MAPKBP1O60336 1514 aa27.98■■■□□ 2.07
CDKN1A-207ENST00000478800 UHRF1BP1LA0JNW5 1464 aa27.98■■■□□ 2.07
CDKN1A-207ENST00000478800 KIF21BO75037 1637 aa27.98■■■□□ 2.07
CDKN1A-207ENST00000478800 ABCC2Q92887 1545 aa27.97■■■□□ 2.07
CDKN1A-207ENST00000478800 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
CDKN1A-207ENST00000478800 P3H3Q8IVL6 736 aa27.96■■■□□ 2.07
CDKN1A-207ENST00000478800 EHMT2Q96KQ7 1210 aa27.96■■■□□ 2.07
CDKN1A-207ENST00000478800 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
CDKN1A-207ENST00000478800 UBTFP17480 764 aaKnown RBP27.93■■■□□ 2.06
CDKN1A-207ENST00000478800 ABCC10Q5T3U5 1492 aa27.91■■■□□ 2.06
CDKN1A-207ENST00000478800 PLB1Q6P1J6 1458 aa27.87■■■□□ 2.05
CDKN1A-207ENST00000478800 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
CDKN1A-207ENST00000478800 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
CDKN1A-207ENST00000478800 KDM5BQ9UGL1 1544 aa27.83■■■□□ 2.05
CDKN1A-207ENST00000478800 SAMD9Q5K651 1589 aa27.81■■■□□ 2.04
CDKN1A-207ENST00000478800 DIP2BQ9P265 1576 aa27.81■■■□□ 2.04
CDKN1A-207ENST00000478800 ABCA8O94911 1581 aa27.79■■■□□ 2.04
CDKN1A-207ENST00000478800 AEBP2Q6ZN18 517 aaPredicted RBP27.77■■■□□ 2.04
CDKN1A-207ENST00000478800 ZCCHC11Q5TAX3 1644 aaKnown RBP27.75■■■□□ 2.03
CDKN1A-207ENST00000478800 EFCAB5A4FU69 1503 aa27.73■■■□□ 2.03
CDKN1A-207ENST00000478800 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
CDKN1A-207ENST00000478800 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
CDKN1A-207ENST00000478800 WDR7Q9Y4E6 1490 aa27.66■■■□□ 2.02
CDKN1A-207ENST00000478800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.65■■■□□ 2.02
CDKN1A-207ENST00000478800 HNRNPUL2Q1KMD3 747 aaKnown RBP27.65■■■□□ 2.02
CDKN1A-207ENST00000478800 EPRSP07814 1512 aaKnown RBP27.65■■■□□ 2.02
CDKN1A-207ENST00000478800 GLI2P10070 1586 aa27.64■■■□□ 2.01
CDKN1A-207ENST00000478800 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
CDKN1A-207ENST00000478800 RAPGEF6Q8TEU7 1601 aa27.63■■■□□ 2.01
CDKN1A-207ENST00000478800 ATP10BO94823 1461 aa27.61■■■□□ 2.01
CDKN1A-207ENST00000478800 TSPOAP1O95153 1857 aa27.56■■■□□ 2
CDKN1A-207ENST00000478800 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
CDKN1A-207ENST00000478800 FMN1Q68DA7 1419 aa27.53■■■□□ 2
CDKN1A-207ENST00000478800 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
CDKN1A-207ENST00000478800 ATP1B4Q9UN42 357 aaPredicted RBP27.52■■■□□ 2
CDKN1A-207ENST00000478800 TEX14Q8IWB6 1497 aa27.48■■□□□ 1.99
CDKN1A-207ENST00000478800 PLEKHD1A6NEE1 506 aa27.47■■□□□ 1.99
CDKN1A-207ENST00000478800 MAP3K4Q9Y6R4 1608 aa27.47■■□□□ 1.99
CDKN1A-207ENST00000478800 KDM6BO15054 1643 aa27.46■■□□□ 1.99
CDKN1A-207ENST00000478800 CD109Q6YHK3 1445 aa27.46■■□□□ 1.99
CDKN1A-207ENST00000478800 CLIP1P30622 1438 aa27.39■■□□□ 1.97
CDKN1A-207ENST00000478800 PPRC1Q5VV67 1664 aaKnown RBP27.39■■□□□ 1.97
CDKN1A-207ENST00000478800 CFAP43Q8NDM7 1665 aa27.38■■□□□ 1.97
CDKN1A-207ENST00000478800 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
CDKN1A-207ENST00000478800 HECW1Q76N89 1606 aa27.36■■□□□ 1.97
CDKN1A-207ENST00000478800 CDK11AQ9UQ88 783 aaPredicted RBP27.34■■□□□ 1.97
CDKN1A-207ENST00000478800 CDK13Q14004 1512 aaKnown RBP27.33■■□□□ 1.97
CDKN1A-207ENST00000478800 ABCA9Q8IUA7 1624 aa27.29■■□□□ 1.96
CDKN1A-207ENST00000478800 CASKIN1Q8WXD9 1431 aa27.25■■□□□ 1.95
CDKN1A-207ENST00000478800 COL17A1Q9UMD9 1497 aaPredicted RBP27.24■■□□□ 1.95
CDKN1A-207ENST00000478800 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
CDKN1A-207ENST00000478800 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
CDKN1A-207ENST00000478800 CEP162Q5TB80 1403 aa27.2■■□□□ 1.94
CDKN1A-207ENST00000478800 PCF11O94913 1555 aaKnown RBP27.19■■□□□ 1.94
CDKN1A-207ENST00000478800 CCDC18Q5T9S5 1454 aa27.19■■□□□ 1.94
CDKN1A-207ENST00000478800 FYCO1Q9BQS8 1478 aa27.18■■□□□ 1.94
CDKN1A-207ENST00000478800 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.16■■□□□ 1.94
CDKN1A-207ENST00000478800 NEO1Q92859 1461 aa27.15■■□□□ 1.94
CDKN1A-207ENST00000478800 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
CDKN1A-207ENST00000478800 ARAP3Q8WWN8 1544 aa27.12■■□□□ 1.93
CDKN1A-207ENST00000478800 KDM4FA0A1W2PPD8 638 aa27.12■■□□□ 1.93
CDKN1A-207ENST00000478800 TTC37Q6PGP7 1564 aa27.09■■□□□ 1.93
CDKN1A-207ENST00000478800 FANCAO15360 1455 aa27.09■■□□□ 1.93
CDKN1A-207ENST00000478800 KIF14Q15058 1648 aa27.08■■□□□ 1.93
CDKN1A-207ENST00000478800 LRRIQ1Q96JM4 1722 aa27.05■■□□□ 1.92
CDKN1A-207ENST00000478800 RAPGEF3O95398 923 aa27.05■■□□□ 1.92
CDKN1A-207ENST00000478800 PLCH2O75038 1416 aa27.05■■□□□ 1.92
CDKN1A-207ENST00000478800 AKNAQ7Z591 1439 aa27.05■■□□□ 1.92
CDKN1A-207ENST00000478800 CFAP74Q9C0B2 1584 aa27.04■■□□□ 1.92
CDKN1A-207ENST00000478800 EFCAB2Q5VUJ9 269 aa27.03■■□□□ 1.92
CDKN1A-207ENST00000478800 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
CDKN1A-207ENST00000478800 MTUS2Q5JR59 1369 aa26.96■■□□□ 1.91
CDKN1A-207ENST00000478800 MYO5CQ9NQX4 1742 aa26.95■■□□□ 1.9
CDKN1A-207ENST00000478800 ADGRL1O94910 1474 aa26.94■■□□□ 1.9
CDKN1A-207ENST00000478800 ARHGAP5Q13017 1502 aa26.94■■□□□ 1.9
CDKN1A-207ENST00000478800 SCAPERQ9BY12 1400 aa26.91■■□□□ 1.9
CDKN1A-207ENST00000478800 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms