RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
RCC1-211ENST00000478232 CUL7Q14999 1698 aa23.66■■□□□ 1.38
RCC1-211ENST00000478232 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
RCC1-211ENST00000478232 RUSC2Q8N2Y8 1516 aa23.63■■□□□ 1.37
RCC1-211ENST00000478232 NPM1P06748 294 aaKnown RBP eCLIP23.53■■□□□ 1.36
RCC1-211ENST00000478232 RAPGEF2Q9Y4G8 1499 aa23.44■■□□□ 1.34
RCC1-211ENST00000478232 CARMIL2Q6F5E8 1435 aa23.44■■□□□ 1.34
RCC1-211ENST00000478232 PTPRGP23470 1445 aa23.43■■□□□ 1.34
RCC1-211ENST00000478232 TNIKQ9UKE5 1360 aa23.39■■□□□ 1.33
RCC1-211ENST00000478232 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
RCC1-211ENST00000478232 TTBK1Q5TCY1 1321 aaPredicted RBP23.36■■□□□ 1.33
RCC1-211ENST00000478232 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
RCC1-211ENST00000478232 ADCY10Q96PN6 1610 aa23.34■■□□□ 1.33
RCC1-211ENST00000478232 MAPKBP1O60336 1514 aa23.32■■□□□ 1.32
RCC1-211ENST00000478232 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
RCC1-211ENST00000478232 DISP1Q96F81 1524 aa23.28■■□□□ 1.32
RCC1-211ENST00000478232 UGGT2Q9NYU1 1516 aa23.28■■□□□ 1.32
RCC1-211ENST00000478232 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
RCC1-211ENST00000478232 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
RCC1-211ENST00000478232 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
RCC1-211ENST00000478232 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
RCC1-211ENST00000478232 UHRF1BP1LA0JNW5 1464 aa23.22■■□□□ 1.31
RCC1-211ENST00000478232 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
RCC1-211ENST00000478232 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
RCC1-211ENST00000478232 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
RCC1-211ENST00000478232 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.29
RCC1-211ENST00000478232 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
RCC1-211ENST00000478232 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
RCC1-211ENST00000478232 CTTNBP2Q8WZ74 1663 aa23.11■■□□□ 1.29
RCC1-211ENST00000478232 KDM5BQ9UGL1 1544 aa23.1■■□□□ 1.29
RCC1-211ENST00000478232 EEA1Q15075 1411 aa23.09■■□□□ 1.29
RCC1-211ENST00000478232 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
RCC1-211ENST00000478232 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
RCC1-211ENST00000478232 GLI2P10070 1586 aa23.01■■□□□ 1.27
RCC1-211ENST00000478232 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
RCC1-211ENST00000478232 EPRSP07814 1512 aaKnown RBP22.98■■□□□ 1.27
RCC1-211ENST00000478232 TSPOAP1O95153 1857 aa22.97■■□□□ 1.27
RCC1-211ENST00000478232 ZCCHC11Q5TAX3 1644 aaKnown RBP22.97■■□□□ 1.27
RCC1-211ENST00000478232 ABCA8O94911 1581 aa22.96■■□□□ 1.27
RCC1-211ENST00000478232 KDM6BO15054 1643 aa22.94■■□□□ 1.26
RCC1-211ENST00000478232 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
RCC1-211ENST00000478232 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
RCC1-211ENST00000478232 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
RCC1-211ENST00000478232 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
RCC1-211ENST00000478232 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
RCC1-211ENST00000478232 MAP3K4Q9Y6R4 1608 aa22.85■■□□□ 1.25
RCC1-211ENST00000478232 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
RCC1-211ENST00000478232 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
RCC1-211ENST00000478232 ATP10BO94823 1461 aa22.83■■□□□ 1.25
RCC1-211ENST00000478232 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
RCC1-211ENST00000478232 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
RCC1-211ENST00000478232 KIF21BO75037 1637 aa22.8■■□□□ 1.24
RCC1-211ENST00000478232 COL17A1Q9UMD9 1497 aaPredicted RBP22.78■■□□□ 1.24
RCC1-211ENST00000478232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
RCC1-211ENST00000478232 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
RCC1-211ENST00000478232 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.24
RCC1-211ENST00000478232 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
RCC1-211ENST00000478232 FHOD3Q2V2M9 1422 aa22.74■■□□□ 1.23
RCC1-211ENST00000478232 KDM4FA0A1W2PPD8 638 aa22.73■■□□□ 1.23
RCC1-211ENST00000478232 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
RCC1-211ENST00000478232 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
RCC1-211ENST00000478232 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
RCC1-211ENST00000478232 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
RCC1-211ENST00000478232 PLEKHD1A6NEE1 506 aa22.68■■□□□ 1.22
RCC1-211ENST00000478232 NUP153P49790 1475 aaKnown RBP22.67■■□□□ 1.22
RCC1-211ENST00000478232 PHLDB1Q86UU1 1377 aa22.63■■□□□ 1.21
RCC1-211ENST00000478232 ABCA9Q8IUA7 1624 aa22.6■■□□□ 1.21
RCC1-211ENST00000478232 ARAP3Q8WWN8 1544 aa22.58■■□□□ 1.21
RCC1-211ENST00000478232 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
RCC1-211ENST00000478232 ATP1B4Q9UN42 357 aaPredicted RBP22.54■■□□□ 1.2
RCC1-211ENST00000478232 ARHGAP35Q9NRY4 1499 aa22.54■■□□□ 1.2
RCC1-211ENST00000478232 ADGRL1O94910 1474 aa22.52■■□□□ 1.2
RCC1-211ENST00000478232 NEO1Q92859 1461 aa22.52■■□□□ 1.2
RCC1-211ENST00000478232 RAPGEF3O95398 923 aa22.49■■□□□ 1.19
RCC1-211ENST00000478232 CDK11AQ9UQ88 783 aaPredicted RBP22.49■■□□□ 1.19
RCC1-211ENST00000478232 CDK13Q14004 1512 aaKnown RBP22.44■■□□□ 1.18
RCC1-211ENST00000478232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.42■■□□□ 1.18
RCC1-211ENST00000478232 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
RCC1-211ENST00000478232 HECW1Q76N89 1606 aa22.4■■□□□ 1.18
RCC1-211ENST00000478232 FANCAO15360 1455 aa22.39■■□□□ 1.17
RCC1-211ENST00000478232 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
RCC1-211ENST00000478232 PLCH2O75038 1416 aa22.36■■□□□ 1.17
RCC1-211ENST00000478232 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
RCC1-211ENST00000478232 TTC37Q6PGP7 1564 aa22.33■■□□□ 1.17
RCC1-211ENST00000478232 CFAP74Q9C0B2 1584 aa22.32■■□□□ 1.16
RCC1-211ENST00000478232 TROQ12816 1431 aaPredicted RBP22.31■■□□□ 1.16
RCC1-211ENST00000478232 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
RCC1-211ENST00000478232 CLIP1P30622 1438 aa22.3■■□□□ 1.16
RCC1-211ENST00000478232 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
RCC1-211ENST00000478232 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
RCC1-211ENST00000478232 SCAPERQ9BY12 1400 aa22.27■■□□□ 1.16
RCC1-211ENST00000478232 CCDC18Q5T9S5 1454 aa22.25■■□□□ 1.15
RCC1-211ENST00000478232 RICTORQ6R327 1708 aa22.23■■□□□ 1.15
RCC1-211ENST00000478232 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
RCC1-211ENST00000478232 KIF14Q15058 1648 aa22.22■■□□□ 1.15
RCC1-211ENST00000478232 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
RCC1-211ENST00000478232 ZMYM4Q5VZL5 1548 aa22.2■■□□□ 1.14
RCC1-211ENST00000478232 PCF11O94913 1555 aaKnown RBP22.2■■□□□ 1.14
RCC1-211ENST00000478232 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
RCC1-211ENST00000478232 LRRIQ1Q96JM4 1722 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 1611.1 ms