RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 RUSC2Q8N2Y8 1516 aa17.14■□□□□ 0.33
CCM2-210ENST00000478169 NPM1P06748 294 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCM2-210ENST00000478169 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
CCM2-210ENST00000478169 KIAA0586Q9BVV6 1533 aa17.06■□□□□ 0.32
CCM2-210ENST00000478169 ABCC10Q5T3U5 1492 aa17.05■□□□□ 0.32
CCM2-210ENST00000478169 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
CCM2-210ENST00000478169 IGF1RP08069 1367 aa17.04■□□□□ 0.32
CCM2-210ENST00000478169 CUL7Q14999 1698 aa17.04■□□□□ 0.32
CCM2-210ENST00000478169 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
CCM2-210ENST00000478169 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
CCM2-210ENST00000478169 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
CCM2-210ENST00000478169 DIP2BQ9P265 1576 aa17■□□□□ 0.31
CCM2-210ENST00000478169 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
CCM2-210ENST00000478169 CARMIL1Q5VZK9 1371 aa16.92■□□□□ 0.3
CCM2-210ENST00000478169 PTPRGP23470 1445 aa16.92■□□□□ 0.3
CCM2-210ENST00000478169 KDM6BO15054 1643 aa16.91■□□□□ 0.3
CCM2-210ENST00000478169 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
CCM2-210ENST00000478169 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
CCM2-210ENST00000478169 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
CCM2-210ENST00000478169 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
CCM2-210ENST00000478169 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
CCM2-210ENST00000478169 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
CCM2-210ENST00000478169 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
CCM2-210ENST00000478169 GLI2P10070 1586 aa16.81■□□□□ 0.28
CCM2-210ENST00000478169 ASXL2Q76L83 1435 aa16.8■□□□□ 0.28
CCM2-210ENST00000478169 KDM4FA0A1W2PPD8 638 aa16.8■□□□□ 0.28
CCM2-210ENST00000478169 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
CCM2-210ENST00000478169 DISP1Q96F81 1524 aa16.78■□□□□ 0.28
CCM2-210ENST00000478169 PPRC1Q5VV67 1664 aaKnown RBP16.78■□□□□ 0.28
CCM2-210ENST00000478169 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
CCM2-210ENST00000478169 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
CCM2-210ENST00000478169 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
CCM2-210ENST00000478169 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
CCM2-210ENST00000478169 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
CCM2-210ENST00000478169 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
CCM2-210ENST00000478169 ZCCHC11Q5TAX3 1644 aaKnown RBP16.7■□□□□ 0.26
CCM2-210ENST00000478169 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
CCM2-210ENST00000478169 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
CCM2-210ENST00000478169 COL17A1Q9UMD9 1497 aaPredicted RBP16.65■□□□□ 0.26
CCM2-210ENST00000478169 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
CCM2-210ENST00000478169 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
CCM2-210ENST00000478169 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
CCM2-210ENST00000478169 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
CCM2-210ENST00000478169 ABCA8O94911 1581 aa16.56■□□□□ 0.24
CCM2-210ENST00000478169 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
CCM2-210ENST00000478169 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
CCM2-210ENST00000478169 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
CCM2-210ENST00000478169 KCNH8Q96L42 1107 aa16.51■□□□□ 0.23
CCM2-210ENST00000478169 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
CCM2-210ENST00000478169 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
CCM2-210ENST00000478169 HECW2Q9P2P5 1572 aa16.45■□□□□ 0.22
CCM2-210ENST00000478169 ARAP3Q8WWN8 1544 aa16.44■□□□□ 0.22
CCM2-210ENST00000478169 ATP10BO94823 1461 aa16.42■□□□□ 0.22
CCM2-210ENST00000478169 PHLDB1Q86UU1 1377 aa16.4■□□□□ 0.22
CCM2-210ENST00000478169 P3H3Q8IVL6 736 aa16.4■□□□□ 0.22
CCM2-210ENST00000478169 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
CCM2-210ENST00000478169 KIF21BO75037 1637 aa16.39■□□□□ 0.21
CCM2-210ENST00000478169 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
CCM2-210ENST00000478169 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
CCM2-210ENST00000478169 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
CCM2-210ENST00000478169 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
CCM2-210ENST00000478169 NEO1Q92859 1461 aa16.34■□□□□ 0.21
CCM2-210ENST00000478169 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
CCM2-210ENST00000478169 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
CCM2-210ENST00000478169 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
CCM2-210ENST00000478169 EEA1Q15075 1411 aa16.29■□□□□ 0.2
CCM2-210ENST00000478169 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
CCM2-210ENST00000478169 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
CCM2-210ENST00000478169 PTPRMP28827 1452 aa16.26■□□□□ 0.19
CCM2-210ENST00000478169 FRMPD1Q5SYB0 1578 aa16.25■□□□□ 0.19
CCM2-210ENST00000478169 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
CCM2-210ENST00000478169 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
CCM2-210ENST00000478169 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
CCM2-210ENST00000478169 RANGAP1P46060 587 aaPredicted RBP16.21■□□□□ 0.19
CCM2-210ENST00000478169 ARID4BQ4LE39 1312 aaPredicted RBP16.2■□□□□ 0.18
CCM2-210ENST00000478169 RICTORQ6R327 1708 aa16.2■□□□□ 0.18
CCM2-210ENST00000478169 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
CCM2-210ENST00000478169 CFAP74Q9C0B2 1584 aa16.2■□□□□ 0.18
CCM2-210ENST00000478169 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
CCM2-210ENST00000478169 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
CCM2-210ENST00000478169 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
CCM2-210ENST00000478169 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCM2-210ENST00000478169 ARHGEF40Q8TER5 1519 aa16.18■□□□□ 0.18
CCM2-210ENST00000478169 FANCAO15360 1455 aa16.17■□□□□ 0.18
CCM2-210ENST00000478169 FBXO41Q8TF61 875 aa16.15■□□□□ 0.18
CCM2-210ENST00000478169 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
CCM2-210ENST00000478169 TTC37Q6PGP7 1564 aa16.14■□□□□ 0.17
CCM2-210ENST00000478169 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
CCM2-210ENST00000478169 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
CCM2-210ENST00000478169 POGZQ7Z3K3 1410 aa16.12■□□□□ 0.17
CCM2-210ENST00000478169 LMTK3Q96Q04 1460 aa16.12■□□□□ 0.17
CCM2-210ENST00000478169 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
CCM2-210ENST00000478169 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
CCM2-210ENST00000478169 PLCH2O75038 1416 aa16.09■□□□□ 0.17
CCM2-210ENST00000478169 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
CCM2-210ENST00000478169 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
CCM2-210ENST00000478169 HECW1Q76N89 1606 aa16.07■□□□□ 0.16
CCM2-210ENST00000478169 SIGLEC1Q9BZZ2 1709 aa16.07■□□□□ 0.16
CCM2-210ENST00000478169 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
CCM2-210ENST00000478169 SCAPERQ9BY12 1400 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms